RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 ZNF737O75373 536 aa12.4□□□□□ -0.42
ZC3H4-201ENST00000253048 EMP1P54849 157 aa12.4□□□□□ -0.42
ZC3H4-201ENST00000253048 FAM166AQ6J272 317 aa12.4□□□□□ -0.42
ZC3H4-201ENST00000253048 TMEM52Q8NDY8 209 aa12.4□□□□□ -0.42
ZC3H4-201ENST00000253048 SLC25A28Q96A46 364 aa12.4□□□□□ -0.42
ZC3H4-201ENST00000253048 NKX6-2Q9C056 277 aaPredicted RBP12.4□□□□□ -0.42
ZC3H4-201ENST00000253048 NPIPB11E5RHQ5 1161 aa12.4□□□□□ -0.43
ZC3H4-201ENST00000253048 SLC6A1P30531 599 aa12.4□□□□□ -0.43
ZC3H4-201ENST00000253048 MESP2Q0VG99 397 aa12.4□□□□□ -0.43
ZC3H4-201ENST00000253048 SLC35E3Q7Z769 313 aa12.4□□□□□ -0.43
ZC3H4-201ENST00000253048 RGPD3A6NKT7 1758 aaPredicted RBP12.4□□□□□ -0.43
ZC3H4-201ENST00000253048 TO15178 435 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 HBZP02008 142 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 NPPCP23582 126 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 DNM1P46Q6ZS02 220 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 OVCH2Q7RTZ1 564 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 PRNTQ86SH4 94 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 GBGT1Q8N5D6 347 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 RREB1Q92766 1687 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 INHBBP09529 407 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 HIST1H3AP68431 136 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 ZP4Q12836 540 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 SEZ6L2Q6UXD5 910 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 OR52B4Q8NGK2 314 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 CHST5Q9GZS9 411 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 SMCHD1A6NHR9 2005 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 TMSB15BA0A087X1C1 80 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 M0R143 59 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 LMX1BO60663 402 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 CSN3P07498 182 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 CAMPP49913 170 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 KLF9Q13886 244 aaPredicted RBP12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 IL13RA2Q14627 380 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 HERPUD1Q15011 391 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 CELF2-AS1Q8N7Q2 184 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 ASB13Q8WXK3 278 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 FXYD3Q14802 87 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 Q6ZT83 130 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 AQP10Q96PS8 301 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 ZNF629Q9UEG4 869 aaPredicted RBP12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 PPP1R17O96001 155 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 CD33P20138 364 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 TMEM183BQ1AE95 376 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 OR10AC1Q8NH08 325 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 NEURL2Q9BR09 285 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 PLAC1Q9HBJ0 212 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 PGPEP1Q9NXJ5 209 aa12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 MRM2Q9UI43 246 aaKnown RBP12.39□□□□□ -0.43
ZC3H4-201ENST00000253048 A0A0A6YYJ9 748 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 A0A1W2PNV4 684 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 CEACAM18A8MTB9 384 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 SNURFLB1AK76 121 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 IGKV3-20P01619 116 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 TEPPQ6URK8 271 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 CLEC9AQ6UXN8 241 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 GLDNQ6ZMI3 551 aaPredicted RBP12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 SIGLEC12Q96PQ1 595 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 TP53RKQ96S44 253 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 MRPL13Q9BYD1 178 aaKnown RBP12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 CALYQ9NYX4 217 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 CTAG2O75638 210 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 SSX1Q16384 188 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 C2CD4CQ8TF44 421 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 NTN4Q9HB63 628 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 Q9N2K0 584 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 TMEM140Q9NV12 185 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 OR2H2O95918 312 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 HIST1H1BP16401 226 aaKnown RBP12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 RPL8P62917 257 aaKnown RBP12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 COLCA1Q6ZS62 124 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 BAP18Q8IXM2 172 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 TNS1Q9HBL0 1735 aaKnown RBP12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 E9PLN8 166 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 TSPAN2O60636 221 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 CTSDP07339 412 aaPredicted RBP12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 JUNBP17275 347 aaPredicted RBP12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 MAS1LP35410 378 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 CDX1P47902 265 aaPredicted RBP12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 EVX1P49640 407 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 MMP15P51511 669 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 RNF165Q6ZSG1 346 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 SLC7A5P1Q8MH63 180 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 VKORC1Q9BQB6 163 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 PILRAQ9UKJ1 303 aa12.38□□□□□ -0.43
ZC3H4-201ENST00000253048 SMIM4Q8WVI0 70 aa12.37□□□□□ -0.43
ZC3H4-201ENST00000253048 TMEM186Q96B77 213 aa12.37□□□□□ -0.43
ZC3H4-201ENST00000253048 YIPF6Q96EC8 236 aa12.37□□□□□ -0.43
ZC3H4-201ENST00000253048 RTN4RQ9BZR6 473 aa12.37□□□□□ -0.43
ZC3H4-201ENST00000253048 GP6Q9HCN6 339 aa12.37□□□□□ -0.43
ZC3H4-201ENST00000253048 LTBRP36941 435 aa12.37□□□□□ -0.43
ZC3H4-201ENST00000253048 ZAR1Q86SH2 424 aa12.37□□□□□ -0.43
ZC3H4-201ENST00000253048 OR5H6Q8NGV6 325 aa12.37□□□□□ -0.43
ZC3H4-201ENST00000253048 SH3BGRL3Q9H299 93 aa12.37□□□□□ -0.43
ZC3H4-201ENST00000253048 ZG16O60844 167 aa12.37□□□□□ -0.43
ZC3H4-201ENST00000253048 ISG15P05161 165 aa12.37□□□□□ -0.43
ZC3H4-201ENST00000253048 ZNF429Q86V71 674 aa12.37□□□□□ -0.43
ZC3H4-201ENST00000253048 RNF133Q8WVZ7 376 aa12.37□□□□□ -0.43
ZC3H4-201ENST00000253048 PTX4Q96A99 478 aa12.37□□□□□ -0.43
ZC3H4-201ENST00000253048 FAM131CQ96AQ9 280 aa12.37□□□□□ -0.43
ZC3H4-201ENST00000253048 TMEM191AQ9H0A3 160 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms