RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 FIP1L1Q6UN15 594 aaKnown RBP16.42■□□□□ 0.22
CDC42EP1-201ENST00000249014 KDF1Q8NAX2 398 aaPredicted RBP16.42■□□□□ 0.22
CDC42EP1-201ENST00000249014 C1orf162Q8NEQ5 155 aaPredicted RBP16.42■□□□□ 0.22
CDC42EP1-201ENST00000249014 CD300LFQ8TDQ1 290 aa16.42■□□□□ 0.22
CDC42EP1-201ENST00000249014 C2CD4CQ8TF44 421 aa16.42■□□□□ 0.22
CDC42EP1-201ENST00000249014 MSL2Q9HCI7 577 aa16.42■□□□□ 0.22
CDC42EP1-201ENST00000249014 RNF150Q9ULK6 438 aa16.42■□□□□ 0.22
CDC42EP1-201ENST00000249014 A6NLC8 198 aa16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 GALR2O43603 387 aaPredicted RBP16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 FABP6P51161 128 aa16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 ACSF3Q4G176 576 aaPredicted RBP16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 AKR1C8PQ5T2L2 129 aa16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 WDR82Q6UXN9 313 aa16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 ACP7Q6ZNF0 438 aa16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 SARAFQ96BY9 339 aa16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 C5orf30Q96GV9 206 aa16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 COQ2Q96H96 371 aa16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 EGLN1Q9GZT9 426 aa16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 CXXC4Q9H2H0 198 aa16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 UFSP2Q9NUQ7 469 aa16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 TIMM8AO60220 97 aaPredicted RBP16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 DFFBO76075 338 aa16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 CD200P41217 278 aa16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 THNSL2Q86YJ6 484 aa16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 OR52L2PQ8NGH6 319 aa16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 HIST1H2BAQ96A08 127 aa16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 ISOC2Q96AB3 205 aa16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 GALMQ96C23 342 aa16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 BCL2L14Q9BZR8 327 aa16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 PSENENQ9NZ42 101 aa16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 KCNIP1Q9NZI2 227 aa16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 KIAA1456Q9P272 454 aa16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 DKK4Q9UBT3 224 aa16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 CACNA1DQ01668 2161 aa16.41■□□□□ 0.22
CDC42EP1-201ENST00000249014 RAMP3O60896 148 aa16.4■□□□□ 0.22
CDC42EP1-201ENST00000249014 PTBP3O95758 552 aaKnown RBP16.4■□□□□ 0.22
CDC42EP1-201ENST00000249014 METTL15P1P0C7V9 234 aa16.4■□□□□ 0.22
CDC42EP1-201ENST00000249014 HAGHQ16775 308 aa16.4■□□□□ 0.22
CDC42EP1-201ENST00000249014 DEFB109BQ30KR1 87 aa16.4■□□□□ 0.22
CDC42EP1-201ENST00000249014 SLC35E4Q6ICL7 350 aa16.4■□□□□ 0.22
CDC42EP1-201ENST00000249014 HAPLN4Q86UW8 402 aa16.4■□□□□ 0.22
CDC42EP1-201ENST00000249014 FGFRL1Q8N441 504 aa16.4■□□□□ 0.22
CDC42EP1-201ENST00000249014 ZNF610Q8N9Z0 462 aa16.4■□□□□ 0.22
CDC42EP1-201ENST00000249014 SFT2D1Q8WV19 159 aa16.4■□□□□ 0.22
CDC42EP1-201ENST00000249014 OR2D2Q9H210 308 aa16.4■□□□□ 0.22
CDC42EP1-201ENST00000249014 PLSCR4Q9NRQ2 329 aa16.4■□□□□ 0.22
CDC42EP1-201ENST00000249014 METRNQ9UJH8 293 aa16.4■□□□□ 0.22
CDC42EP1-201ENST00000249014 PTPRBP23467 1997 aa16.4■□□□□ 0.22
CDC42EP1-201ENST00000249014 HEATR1Q9H583 2144 aaKnown RBP16.4■□□□□ 0.22
CDC42EP1-201ENST00000249014 BTBD17A6NE02 478 aa16.4■□□□□ 0.22
CDC42EP1-201ENST00000249014 TNFSF13O75888 250 aa16.4■□□□□ 0.22
CDC42EP1-201ENST00000249014 KITLGP21583 273 aa16.4■□□□□ 0.22
CDC42EP1-201ENST00000249014 LINC00518Q8N0U6 118 aa16.4■□□□□ 0.22
CDC42EP1-201ENST00000249014 ZNF645Q8N7E2 425 aa16.4■□□□□ 0.22
CDC42EP1-201ENST00000249014 TAAR6Q96RI8 345 aa16.4■□□□□ 0.22
CDC42EP1-201ENST00000249014 RSG1Q9BU20 258 aa16.4■□□□□ 0.22
CDC42EP1-201ENST00000249014 OPN3Q9H1Y3 402 aaPredicted RBP16.4■□□□□ 0.22
CDC42EP1-201ENST00000249014 SMDT1Q9H4I9 107 aa16.4■□□□□ 0.22
CDC42EP1-201ENST00000249014 IGLV1-44P01699 117 aa16.39■□□□□ 0.21
CDC42EP1-201ENST00000249014 HBZP02008 142 aa16.39■□□□□ 0.21
CDC42EP1-201ENST00000249014 FOLR2P14207 255 aa16.39■□□□□ 0.21
CDC42EP1-201ENST00000249014 RPL30P62888 115 aaKnown RBP16.39■□□□□ 0.21
CDC42EP1-201ENST00000249014 SOHLH1Q5JUK2 328 aa16.39■□□□□ 0.21
CDC42EP1-201ENST00000249014 BOD1L1Q8NFC6 3051 aa16.39■□□□□ 0.21
CDC42EP1-201ENST00000249014 USF3Q68DE3 2245 aa16.39■□□□□ 0.21
CDC42EP1-201ENST00000249014 IGHV1-18A0A0C4DH31 117 aa16.38■□□□□ 0.21
CDC42EP1-201ENST00000249014 OOEPA6NGQ2 149 aa16.38■□□□□ 0.21
CDC42EP1-201ENST00000249014 IFNA5P01569 189 aa16.38■□□□□ 0.21
CDC42EP1-201ENST00000249014 IL2RGP31785 369 aa16.38■□□□□ 0.21
CDC42EP1-201ENST00000249014 EIF4EBP1Q13541 118 aaPredicted RBP16.38■□□□□ 0.21
CDC42EP1-201ENST00000249014 HABP2Q14520 560 aaPredicted RBP16.38■□□□□ 0.21
CDC42EP1-201ENST00000249014 SNIP1Q8TAD8 396 aaKnown RBP16.38■□□□□ 0.21
CDC42EP1-201ENST00000249014 MRGPRDQ8TDS7 321 aa16.38■□□□□ 0.21
CDC42EP1-201ENST00000249014 SVILO95425 2214 aa16.38■□□□□ 0.21
CDC42EP1-201ENST00000249014 IGHV2OR16-5A0A0B4J2B6 119 aa16.38■□□□□ 0.21
CDC42EP1-201ENST00000249014 OR2B11Q5JQS5 317 aa16.38■□□□□ 0.21
CDC42EP1-201ENST00000249014 SLC25A24Q6NUK1 477 aa16.38■□□□□ 0.21
CDC42EP1-201ENST00000249014 ZNF808Q8N4W9 903 aaPredicted RBP16.38■□□□□ 0.21
CDC42EP1-201ENST00000249014 ZNF525Q8N782 197 aa16.38■□□□□ 0.21
CDC42EP1-201ENST00000249014 TPRX1Q8N7U7 411 aa16.38■□□□□ 0.21
CDC42EP1-201ENST00000249014 STARD4Q96DR4 205 aa16.38■□□□□ 0.21
CDC42EP1-201ENST00000249014 TUBA4BQ9H853 241 aa16.38■□□□□ 0.21
CDC42EP1-201ENST00000249014 ZNF71Q9NQZ8 489 aaPredicted RBP16.38■□□□□ 0.21
CDC42EP1-201ENST00000249014 PUS1Q9Y606 427 aaKnown RBP eCLIP16.38■□□□□ 0.21
CDC42EP1-201ENST00000249014 A0A1W2PPH5 198 aa16.37■□□□□ 0.21
CDC42EP1-201ENST00000249014 CGAP01215 116 aa16.37■□□□□ 0.21
CDC42EP1-201ENST00000249014 GABRA2P47869 451 aa16.37■□□□□ 0.21
CDC42EP1-201ENST00000249014 TLE4Q04727 773 aa16.37■□□□□ 0.21
CDC42EP1-201ENST00000249014 ICAM4Q14773 271 aa16.37■□□□□ 0.21
CDC42EP1-201ENST00000249014 RHEBQ15382 184 aa16.37■□□□□ 0.21
CDC42EP1-201ENST00000249014 PRR7Q8TB68 274 aa16.37■□□□□ 0.21
CDC42EP1-201ENST00000249014 HIPK2Q9H2X6 1198 aa16.37■□□□□ 0.21
CDC42EP1-201ENST00000249014 BIN3Q9NQY0 253 aa16.37■□□□□ 0.21
CDC42EP1-201ENST00000249014 RNF212BA8MTL3 300 aa16.37■□□□□ 0.21
CDC42EP1-201ENST00000249014 ARG1P05089 322 aa16.37■□□□□ 0.21
CDC42EP1-201ENST00000249014 SRP19P09132 144 aaKnown RBP16.37■□□□□ 0.21
CDC42EP1-201ENST00000249014 FBP1P09467 338 aa16.37■□□□□ 0.21
CDC42EP1-201ENST00000249014 GLIPR1P48060 266 aa16.37■□□□□ 0.21
CDC42EP1-201ENST00000249014 COL10A1Q03692 680 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms