RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 HES1Q14469 280 aa10.19□□□□□ -0.78
VPREB3-201ENST00000248948 FAM53AQ6NSI3 398 aaPredicted RBP10.19□□□□□ -0.78
VPREB3-201ENST00000248948 SFXN4Q6P4A7 337 aa10.19□□□□□ -0.78
VPREB3-201ENST00000248948 TSPAN14Q8NG11 270 aa10.19□□□□□ -0.78
VPREB3-201ENST00000248948 OR2AK2Q8NG84 335 aa10.19□□□□□ -0.78
VPREB3-201ENST00000248948 OR52L2PQ8NGH6 319 aa10.19□□□□□ -0.78
VPREB3-201ENST00000248948 OR10R2Q8NGX6 335 aa10.19□□□□□ -0.78
VPREB3-201ENST00000248948 SETD6Q8TBK2 473 aa10.19□□□□□ -0.78
VPREB3-201ENST00000248948 WIPF2Q8TF74 440 aaPredicted RBP10.19□□□□□ -0.78
VPREB3-201ENST00000248948 CMSS1Q9BQ75 279 aaKnown RBP10.19□□□□□ -0.78
VPREB3-201ENST00000248948 Q9N2K0 584 aa10.19□□□□□ -0.78
VPREB3-201ENST00000248948 WNK1Q9H4A3 2382 aa10.18□□□□□ -0.78
VPREB3-201ENST00000248948 RAB27BO00194 218 aa10.18□□□□□ -0.78
VPREB3-201ENST00000248948 ITGB1BP1O14713 200 aa10.18□□□□□ -0.78
VPREB3-201ENST00000248948 PEX14O75381 377 aa10.18□□□□□ -0.78
VPREB3-201ENST00000248948 DIRAS3O95661 229 aa10.18□□□□□ -0.78
VPREB3-201ENST00000248948 AMY1AP04745 511 aa10.18□□□□□ -0.78
VPREB3-201ENST00000248948 AMY2AP04746 511 aa10.18□□□□□ -0.78
VPREB3-201ENST00000248948 VSIG10L2P0DP72 767 aa10.18□□□□□ -0.78
VPREB3-201ENST00000248948 HIST1H1DP16402 221 aaKnown RBP10.18□□□□□ -0.78
VPREB3-201ENST00000248948 CD1BP29016 333 aa10.18□□□□□ -0.78
VPREB3-201ENST00000248948 BLCAPP62952 87 aa10.18□□□□□ -0.78
VPREB3-201ENST00000248948 MRPS15P82914 257 aaKnown RBP10.18□□□□□ -0.78
VPREB3-201ENST00000248948 PLA2G7Q13093 441 aa10.18□□□□□ -0.78
VPREB3-201ENST00000248948 TREML4Q6UXN2 200 aa10.18□□□□□ -0.78
VPREB3-201ENST00000248948 MOB3BQ86TA1 216 aa10.18□□□□□ -0.78
VPREB3-201ENST00000248948 LYG1Q8N1E2 194 aa10.18□□□□□ -0.78
VPREB3-201ENST00000248948 Q8N6K4 173 aa10.18□□□□□ -0.78
VPREB3-201ENST00000248948 C5orf56Q8N8D9 126 aa10.18□□□□□ -0.78
VPREB3-201ENST00000248948 OR8H1Q8NGG4 311 aa10.18□□□□□ -0.78
VPREB3-201ENST00000248948 OR2T10Q8NGZ9 312 aa10.18□□□□□ -0.78
VPREB3-201ENST00000248948 IL1F10Q8WWZ1 152 aa10.18□□□□□ -0.78
VPREB3-201ENST00000248948 EDARADDQ8WWZ3 215 aa10.18□□□□□ -0.78
VPREB3-201ENST00000248948 HDHD3Q9BSH5 251 aaPredicted RBP10.18□□□□□ -0.78
VPREB3-201ENST00000248948 IFI27L2Q9H2X8 130 aa10.18□□□□□ -0.78
VPREB3-201ENST00000248948 MMP27Q9H306 513 aa10.18□□□□□ -0.78
VPREB3-201ENST00000248948 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.18□□□□□ -0.78
VPREB3-201ENST00000248948 A0A0B4J203 849 aa10.17□□□□□ -0.78
VPREB3-201ENST00000248948 LOC100506127A0A0U1RQW1 187 aa10.17□□□□□ -0.78
VPREB3-201ENST00000248948 SMIM30A4D0T7 59 aa10.17□□□□□ -0.78
VPREB3-201ENST00000248948 TRIM64CA6NLI5 447 aa10.17□□□□□ -0.78
VPREB3-201ENST00000248948 RRP9O43818 475 aaKnown RBP10.17□□□□□ -0.78
VPREB3-201ENST00000248948 FBXO24O75426 580 aa10.17□□□□□ -0.78
VPREB3-201ENST00000248948 FCGR3AP08637 254 aa10.17□□□□□ -0.78
VPREB3-201ENST00000248948 CD3GP09693 182 aa10.17□□□□□ -0.78
VPREB3-201ENST00000248948 SLC2A2P11168 524 aaPredicted RBP10.17□□□□□ -0.78
VPREB3-201ENST00000248948 ZBTB25P24278 435 aa10.17□□□□□ -0.78
VPREB3-201ENST00000248948 SDC2P34741 201 aa10.17□□□□□ -0.78
VPREB3-201ENST00000248948 LSAMPQ13449 338 aa10.17□□□□□ -0.78
VPREB3-201ENST00000248948 KIR2DS1Q14954 304 aa10.17□□□□□ -0.78
VPREB3-201ENST00000248948 TMEM95Q3KNT9 176 aa10.17□□□□□ -0.78
VPREB3-201ENST00000248948 MOGAT2Q3SYC2 334 aa10.17□□□□□ -0.78
VPREB3-201ENST00000248948 ABCA11PQ4W5N1 156 aa10.17□□□□□ -0.78
VPREB3-201ENST00000248948 ZNF833PQ6ZTB9 187 aa10.17□□□□□ -0.78
VPREB3-201ENST00000248948 ODF3L1Q8IXM7 274 aa10.17□□□□□ -0.78
VPREB3-201ENST00000248948 LGALS14Q8TCE9 139 aa10.17□□□□□ -0.78
VPREB3-201ENST00000248948 CENPOQ9BU64 300 aa10.17□□□□□ -0.78
VPREB3-201ENST00000248948 GHITMQ9H3K2 345 aa10.17□□□□□ -0.78
VPREB3-201ENST00000248948 PIPOXQ9P0Z9 390 aa10.17□□□□□ -0.78
VPREB3-201ENST00000248948 DAPK2Q9UIK4 370 aa10.17□□□□□ -0.78
VPREB3-201ENST00000248948 KCNK7Q9Y2U2 307 aa10.17□□□□□ -0.78
VPREB3-201ENST00000248948 ETV7Q9Y603 341 aa10.17□□□□□ -0.78
VPREB3-201ENST00000248948 CMYA5Q8N3K9 4069 aa10.17□□□□□ -0.78
VPREB3-201ENST00000248948 SAA2-SAA4A0A096LPE2 208 aa10.16□□□□□ -0.78
VPREB3-201ENST00000248948 MOSP00540 346 aa10.16□□□□□ -0.78
VPREB3-201ENST00000248948 SAA2P0DJI9 122 aaPredicted RBP10.16□□□□□ -0.78
VPREB3-201ENST00000248948 SERPINB10P48595 397 aa10.16□□□□□ -0.78
VPREB3-201ENST00000248948 SRSF7Q16629 238 aaKnown RBP eCLIP10.16□□□□□ -0.78
VPREB3-201ENST00000248948 Q6ZS46 218 aa10.16□□□□□ -0.78
VPREB3-201ENST00000248948 OR4A4PQ8NGN8 299 aa10.16□□□□□ -0.78
VPREB3-201ENST00000248948 YIPF6Q96EC8 236 aa10.16□□□□□ -0.78
VPREB3-201ENST00000248948 EAF1Q96JC9 268 aaPredicted RBP10.16□□□□□ -0.78
VPREB3-201ENST00000248948 CABLES2Q9BTV7 478 aa10.16□□□□□ -0.78
VPREB3-201ENST00000248948 ATG5Q9H1Y0 275 aa10.16□□□□□ -0.78
VPREB3-201ENST00000248948 LIN7CQ9NUP9 197 aaKnown RBP10.16□□□□□ -0.78
VPREB3-201ENST00000248948 SLC23A1Q9UHI7 598 aa10.16□□□□□ -0.78
VPREB3-201ENST00000248948 TRDCB7Z8K6 153 aa10.15□□□□□ -0.78
VPREB3-201ENST00000248948 RAB29O14966 203 aa10.15□□□□□ -0.78
VPREB3-201ENST00000248948 GNB3P16520 340 aa10.15□□□□□ -0.78
VPREB3-201ENST00000248948 DTYMKP23919 212 aa10.15□□□□□ -0.78
VPREB3-201ENST00000248948 MXD1Q05195 221 aa10.15□□□□□ -0.78
VPREB3-201ENST00000248948 Q6ZS49 121 aa10.15□□□□□ -0.78
VPREB3-201ENST00000248948 CROCCP3Q8IVE0 287 aa10.15□□□□□ -0.78
VPREB3-201ENST00000248948 MRPL20Q9BYC9 149 aaKnown RBP10.15□□□□□ -0.78
VPREB3-201ENST00000248948 RHBDL2Q9NX52 303 aa10.15□□□□□ -0.78
VPREB3-201ENST00000248948 OR1A1Q9P1Q5 309 aa10.15□□□□□ -0.78
VPREB3-201ENST00000248948 A0A0A6YYH2 397 aa10.14□□□□□ -0.79
VPREB3-201ENST00000248948 IGHV3-72A0A0B4J1Y9 119 aa10.14□□□□□ -0.79
VPREB3-201ENST00000248948 A6NJ64 397 aa10.14□□□□□ -0.79
VPREB3-201ENST00000248948 ST8SIA5O15466 376 aa10.14□□□□□ -0.79
VPREB3-201ENST00000248948 FABP7O15540 132 aa10.14□□□□□ -0.79
VPREB3-201ENST00000248948 HSPA12AO43301 675 aa10.14□□□□□ -0.79
VPREB3-201ENST00000248948 AIREO43918 545 aa10.14□□□□□ -0.79
VPREB3-201ENST00000248948 TSPAN15O95858 294 aa10.14□□□□□ -0.79
VPREB3-201ENST00000248948 GSTP1P09211 210 aaKnown RBP10.14□□□□□ -0.79
VPREB3-201ENST00000248948 CSF1P09603 554 aa10.14□□□□□ -0.79
VPREB3-201ENST00000248948 SCTP09683 121 aa10.14□□□□□ -0.79
VPREB3-201ENST00000248948 SNRPBP14678 240 aaKnown RBP10.14□□□□□ -0.79
VPREB3-201ENST00000248948 ARFRP1Q13795 201 aa10.14□□□□□ -0.79
VPREB3-201ENST00000248948 C5orf24Q7Z6I8 188 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms