RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 BAK1Q16611 211 aa9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 Q3ZCU0 254 aa9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 RTN4RL2Q86UN3 420 aa9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 OR51H1Q8NH63 302 aa9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 DEDD2Q8WXF8 326 aa9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 ST8SIA5O15466 376 aa9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 TMEM133Q9H2Q1 129 aa9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 GFOD1Q9NXC2 390 aa9.2□□□□□ -0.94
TNFAIP3-201ENST00000237289 TRAV40A0A0B4J280 105 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 F2RL2O00254 374 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 RAB29O14966 203 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 CD37P11049 281 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 HEPN1Q6WQI6 88 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 VMO1Q7Z5L0 202 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 SLC7A5P1Q8MH63 180 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 FGFRL1Q8N441 504 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 C18orf12Q96KH6 178 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 PDCD10Q9BUL8 212 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 FAM157AC9JC47 383 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 DMRTB1Q96MA1 342 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 ZFHX4Q86UP3 3567 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 INMT-MINDY4F8WBC2 141 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 TNFSF12O43508 249 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 PPYP01298 95 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 GAPDHP04406 335 aaKnown RBP9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 IGHV1-8P0DP01 117 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 AADACP22760 399 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 PRB3Q04118 309 aaPredicted RBP9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 ZNF695Q8IW36 515 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 ANKRD20A5PA0PJZ0 165 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 J3QLI3 93 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 GPR31O00270 319 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 ARPC1BO15143 372 aaKnown RBP9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 LMO4P61968 165 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 RPS16P62249 146 aaKnown RBP9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 CLEC9AQ6UXN8 241 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 KCTD9Q7L273 389 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 SLC38A6Q8IZM9 456 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 OR10A7Q8NGE5 316 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 MMP26Q9NRE1 261 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 TNFRSF19Q9NS68 423 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 OR1A1Q9P1Q5 309 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 KIAA1456Q9P272 454 aa9.19□□□□□ -0.94
TNFAIP3-201ENST00000237289 KIAA2026Q5HYC2 2103 aa9.18□□□□□ -0.94
TNFAIP3-201ENST00000237289 C22orf46C9J442 243 aa9.18□□□□□ -0.94
TNFAIP3-201ENST00000237289 CCNKO75909 580 aa9.18□□□□□ -0.94
TNFAIP3-201ENST00000237289 NAPSAO96009 420 aa9.18□□□□□ -0.94
TNFAIP3-201ENST00000237289 CRYBA1P05813 215 aa9.18□□□□□ -0.94
TNFAIP3-201ENST00000237289 BAMBIQ13145 260 aa9.18□□□□□ -0.94
TNFAIP3-201ENST00000237289 SSX2Q16385 188 aa9.18□□□□□ -0.94
TNFAIP3-201ENST00000237289 GHITMQ9H3K2 345 aa9.18□□□□□ -0.94
TNFAIP3-201ENST00000237289 NCOR1P1Q9H4R4 102 aa9.18□□□□□ -0.94
TNFAIP3-201ENST00000237289 NUDT15Q9NV35 164 aa9.18□□□□□ -0.94
TNFAIP3-201ENST00000237289 DPM3Q9P2X0 92 aa9.18□□□□□ -0.94
TNFAIP3-201ENST00000237289 PRTN3P24158 256 aa9.18□□□□□ -0.94
TNFAIP3-201ENST00000237289 CR1LQ2VPA4 569 aa9.18□□□□□ -0.94
TNFAIP3-201ENST00000237289 AKAP14Q86UN6 197 aa9.18□□□□□ -0.94
TNFAIP3-201ENST00000237289 SUN5Q8TC36 379 aa9.18□□□□□ -0.94
TNFAIP3-201ENST00000237289 MARCH1Q8TCQ1 289 aa9.18□□□□□ -0.94
TNFAIP3-201ENST00000237289 ZNF251Q9BRH9 671 aa9.18□□□□□ -0.94
TNFAIP3-201ENST00000237289 WRBO00258 174 aa9.18□□□□□ -0.94
TNFAIP3-201ENST00000237289 REG1BP48304 166 aa9.18□□□□□ -0.94
TNFAIP3-201ENST00000237289 CCR6P51684 374 aa9.18□□□□□ -0.94
TNFAIP3-201ENST00000237289 HTD2P86397 168 aa9.18□□□□□ -0.94
TNFAIP3-201ENST00000237289 OR2B11Q5JQS5 317 aa9.18□□□□□ -0.94
TNFAIP3-201ENST00000237289 DMBX1Q8NFW5 382 aa9.18□□□□□ -0.94
TNFAIP3-201ENST00000237289 COQ8AQ8NI60 647 aa9.18□□□□□ -0.94
TNFAIP3-201ENST00000237289 MSI2Q96DH6 328 aaKnown RBP9.18□□□□□ -0.94
TNFAIP3-201ENST00000237289 ADTRPQ96IZ2 230 aa9.18□□□□□ -0.94
TNFAIP3-201ENST00000237289 SSX5O60225 188 aa9.17□□□□□ -0.94
TNFAIP3-201ENST00000237289 FBP1P09467 338 aa9.17□□□□□ -0.94
TNFAIP3-201ENST00000237289 C9orf152Q5JTZ5 239 aa9.17□□□□□ -0.94
TNFAIP3-201ENST00000237289 C22orf15Q8WYQ4 148 aa9.17□□□□□ -0.94
TNFAIP3-201ENST00000237289 ABHD14BQ96IU4 210 aa9.17□□□□□ -0.94
TNFAIP3-201ENST00000237289 AKR1E2Q96JD6 320 aa9.17□□□□□ -0.94
TNFAIP3-201ENST00000237289 AIFM2Q9BRQ8 373 aa9.17□□□□□ -0.94
TNFAIP3-201ENST00000237289 NUBP2Q9Y5Y2 271 aa9.17□□□□□ -0.94
TNFAIP3-201ENST00000237289 PI3P19957 117 aa9.17□□□□□ -0.94
TNFAIP3-201ENST00000237289 NKX2-5P52952 324 aaPredicted RBP9.17□□□□□ -0.94
TNFAIP3-201ENST00000237289 ZNF79Q15937 498 aa9.17□□□□□ -0.94
TNFAIP3-201ENST00000237289 MFSD4AQ8N468 514 aa9.17□□□□□ -0.94
TNFAIP3-201ENST00000237289 OR52M1Q8NGK5 317 aa9.17□□□□□ -0.94
TNFAIP3-201ENST00000237289 FLNCQ14315 2725 aa9.17□□□□□ -0.94
TNFAIP3-201ENST00000237289 SHOXO15266 292 aa9.17□□□□□ -0.94
TNFAIP3-201ENST00000237289 PAX1P15863 534 aa9.17□□□□□ -0.94
TNFAIP3-201ENST00000237289 HNF4GQ14541 408 aa9.17□□□□□ -0.94
TNFAIP3-201ENST00000237289 C11orf54Q9H0W9 315 aaPredicted RBP9.17□□□□□ -0.94
TNFAIP3-201ENST00000237289 LIN7CQ9NUP9 197 aaKnown RBP9.17□□□□□ -0.94
TNFAIP3-201ENST00000237289 NBEAQ8NFP9 2946 aa9.17□□□□□ -0.94
TNFAIP3-201ENST00000237289 TRBV6-6A0A0A6YYG2 114 aa9.17□□□□□ -0.94
TNFAIP3-201ENST00000237289 NCBP2LA6PVI3 153 aaKnown RBP9.17□□□□□ -0.94
TNFAIP3-201ENST00000237289 SNAPC5O75971 98 aa9.17□□□□□ -0.94
TNFAIP3-201ENST00000237289 PIGPP57054 158 aa9.17□□□□□ -0.94
TNFAIP3-201ENST00000237289 MMP28Q9H239 520 aa9.17□□□□□ -0.94
TNFAIP3-201ENST00000237289 C5orf51A6NDU8 294 aa9.16□□□□□ -0.94
TNFAIP3-201ENST00000237289 YPEL1O60688 119 aa9.16□□□□□ -0.94
TNFAIP3-201ENST00000237289 HMGN3Q15651 99 aa9.16□□□□□ -0.94
TNFAIP3-201ENST00000237289 VAX1Q5SQQ9 334 aa9.16□□□□□ -0.94
TNFAIP3-201ENST00000237289 GIMAP1Q8WWP7 306 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms