RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 WDR25Q64LD2 544 aaPredicted RBP11.6□□□□□ -0.55
NEK4-201ENST00000233027 WDFY1Q8IWB7 410 aa11.6□□□□□ -0.55
NEK4-201ENST00000233027 RAB1CQ92928 201 aa11.6□□□□□ -0.55
NEK4-201ENST00000233027 ADIPOR1Q96A54 375 aa11.6□□□□□ -0.55
NEK4-201ENST00000233027 EAF1Q96JC9 268 aaPredicted RBP11.6□□□□□ -0.55
NEK4-201ENST00000233027 TRPM6Q9BX84 2022 aa11.6□□□□□ -0.55
NEK4-201ENST00000233027 TUBGCP6Q96RT7 1819 aa11.6□□□□□ -0.55
NEK4-201ENST00000233027 CDX4O14627 284 aaPredicted RBP11.6□□□□□ -0.55
NEK4-201ENST00000233027 SNAI3Q3KNW1 292 aa11.6□□□□□ -0.55
NEK4-201ENST00000233027 FBXW9Q5XUX1 488 aa11.6□□□□□ -0.55
NEK4-201ENST00000233027 BPIFA4PQ86YQ2 179 aa11.6□□□□□ -0.55
NEK4-201ENST00000233027 WFDC3Q8IUB2 231 aa11.6□□□□□ -0.55
NEK4-201ENST00000233027 MS4A3Q96HJ5 214 aa11.6□□□□□ -0.55
NEK4-201ENST00000233027 PAXXQ9BUH6 204 aa11.6□□□□□ -0.55
NEK4-201ENST00000233027 RBKSQ9H477 322 aa11.6□□□□□ -0.55
NEK4-201ENST00000233027 F2RL2O00254 374 aa11.6□□□□□ -0.55
NEK4-201ENST00000233027 ADAM11O75078 769 aa11.6□□□□□ -0.55
NEK4-201ENST00000233027 HIST1H1EP10412 219 aaKnown RBP11.6□□□□□ -0.55
NEK4-201ENST00000233027 H2BFSP57053 126 aa11.6□□□□□ -0.55
NEK4-201ENST00000233027 NAAAQ02083 359 aa11.6□□□□□ -0.55
NEK4-201ENST00000233027 TMEM252Q8N6L7 170 aa11.6□□□□□ -0.55
NEK4-201ENST00000233027 PCGF1Q9BSM1 259 aa11.6□□□□□ -0.55
NEK4-201ENST00000233027 TMUB1Q9BVT8 246 aa11.6□□□□□ -0.55
NEK4-201ENST00000233027 ZNF552Q9H707 407 aaPredicted RBP11.6□□□□□ -0.55
NEK4-201ENST00000233027 ADAMTS7Q9UKP4 1686 aa11.6□□□□□ -0.55
NEK4-201ENST00000233027 OR8I2Q8N0Y5 310 aa11.59□□□□□ -0.55
NEK4-201ENST00000233027 ZBTB34Q8NCN2 500 aa11.59□□□□□ -0.55
NEK4-201ENST00000233027 Q8WTZ3 238 aa11.59□□□□□ -0.55
NEK4-201ENST00000233027 GPR132Q9UNW8 380 aa11.59□□□□□ -0.55
NEK4-201ENST00000233027 QSER1Q2KHR3 1735 aa11.59□□□□□ -0.55
NEK4-201ENST00000233027 PRDX2P32119 198 aa11.59□□□□□ -0.55
NEK4-201ENST00000233027 ECSCRQ19T08 205 aa11.59□□□□□ -0.55
NEK4-201ENST00000233027 AQP3Q92482 292 aa11.59□□□□□ -0.55
NEK4-201ENST00000233027 WIPI2Q9Y4P8 454 aa11.59□□□□□ -0.55
NEK4-201ENST00000233027 PLXNB2O15031 1838 aa11.59□□□□□ -0.55
NEK4-201ENST00000233027 DSPPQ9NZW4 1301 aa11.59□□□□□ -0.55
NEK4-201ENST00000233027 PIN1P1O15428 100 aa11.59□□□□□ -0.55
NEK4-201ENST00000233027 CD99P14209 185 aa11.59□□□□□ -0.55
NEK4-201ENST00000233027 RAB24Q969Q5 203 aa11.59□□□□□ -0.55
NEK4-201ENST00000233027 ATG2BQ96BY7 2078 aa11.59□□□□□ -0.55
NEK4-201ENST00000233027 CTSBP07858 339 aa11.59□□□□□ -0.55
NEK4-201ENST00000233027 CEACAM21Q3KPI0 293 aa11.59□□□□□ -0.55
NEK4-201ENST00000233027 LAIR2Q6ISS4 152 aa11.59□□□□□ -0.55
NEK4-201ENST00000233027 RBPMS2Q6ZRY4 209 aaKnown RBP11.59□□□□□ -0.55
NEK4-201ENST00000233027 OR4C12Q96R67 309 aa11.59□□□□□ -0.55
NEK4-201ENST00000233027 HSPB9Q9BQS6 159 aa11.59□□□□□ -0.55
NEK4-201ENST00000233027 SLC25A10Q9UBX3 287 aaPredicted RBP11.59□□□□□ -0.55
NEK4-201ENST00000233027 TSPAN2O60636 221 aa11.59□□□□□ -0.55
NEK4-201ENST00000233027 HBZP02008 142 aa11.59□□□□□ -0.55
NEK4-201ENST00000233027 NMUP48645 174 aa11.59□□□□□ -0.55
NEK4-201ENST00000233027 COX19Q49B96 90 aa11.59□□□□□ -0.55
NEK4-201ENST00000233027 OR1L8Q8NGR8 309 aa11.59□□□□□ -0.55
NEK4-201ENST00000233027 KCNE5Q9UJ90 142 aa11.59□□□□□ -0.55
NEK4-201ENST00000233027 PILRAQ9UKJ1 303 aa11.59□□□□□ -0.55
NEK4-201ENST00000233027 A0A0U1RQV5 110 aa11.58□□□□□ -0.56
NEK4-201ENST00000233027 H0YL77 283 aa11.58□□□□□ -0.56
NEK4-201ENST00000233027 CLDN18P56856 261 aa11.58□□□□□ -0.56
NEK4-201ENST00000233027 GABRA6Q16445 453 aa11.58□□□□□ -0.56
NEK4-201ENST00000233027 TEX30Q5JUR7 227 aa11.58□□□□□ -0.56
NEK4-201ENST00000233027 ZNF385CQ66K41 422 aaPredicted RBP11.58□□□□□ -0.56
NEK4-201ENST00000233027 SNRNP40Q96DI7 357 aaKnown RBP11.58□□□□□ -0.56
NEK4-201ENST00000233027 SRSF9Q13242 221 aaKnown RBP eCLIP11.58□□□□□ -0.56
NEK4-201ENST00000233027 H0Y980 276 aa11.58□□□□□ -0.56
NEK4-201ENST00000233027 OR2H2O95918 312 aa11.58□□□□□ -0.56
NEK4-201ENST00000233027 PLAUP00749 431 aa11.58□□□□□ -0.56
NEK4-201ENST00000233027 TWIST1Q15672 202 aa11.58□□□□□ -0.56
NEK4-201ENST00000233027 ZNF501Q96CX3 271 aaPredicted RBP11.58□□□□□ -0.56
NEK4-201ENST00000233027 UQCRFS1P47985 274 aa11.58□□□□□ -0.56
NEK4-201ENST00000233027 LBHQ53QV2 105 aaPredicted RBP11.58□□□□□ -0.56
NEK4-201ENST00000233027 TMEM222Q9H0R3 208 aa11.58□□□□□ -0.56
NEK4-201ENST00000233027 HIGD1AQ9Y241 93 aa11.58□□□□□ -0.56
NEK4-201ENST00000233027 SF3B6Q9Y3B4 125 aaKnown RBP11.58□□□□□ -0.56
NEK4-201ENST00000233027 RGPD4Q7Z3J3 1758 aa11.58□□□□□ -0.56
NEK4-201ENST00000233027 SRP14P37108 136 aaKnown RBP11.57□□□□□ -0.56
NEK4-201ENST00000233027 FGF12P61328 243 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 LYRM7Q5U5X0 104 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 FAM27BQ5VT28 67 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 INO80CQ6PI98 192 aaPredicted RBP11.57□□□□□ -0.56
NEK4-201ENST00000233027 OR5R1Q8NH85 324 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 MYOZ3Q8TDC0 251 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 WBP1LQ9NX94 342 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 IGHV3-72A0A0B4J1Y9 119 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 HPRT1P00492 218 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 CCL13Q99616 98 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 LPAR2Q9HBW0 351 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 IGLV1-36A0A0B4J1U3 117 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 A6NDN8 102 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 MFAP2P55001 183 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 HERVK_113P61574 105 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 SPATA45Q537H7 98 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 DCAF10Q5QP82 559 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 DGAT2L7PQ6IED9 249 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 ZNF826PQ6ZT77 177 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 GMPPAQ96IJ6 420 aaPredicted RBP11.57□□□□□ -0.56
NEK4-201ENST00000233027 TLNRD1Q9H1K6 362 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 ERGP11308 486 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 SELENOHQ8IZQ5 122 aaKnown RBP11.57□□□□□ -0.56
NEK4-201ENST00000233027 ZNF645Q8N7E2 425 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 WFIKKN1Q96NZ8 548 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 KCNK17Q96T54 332 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms