RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 RASL11BQ9BPW5 248 aa11.23□□□□□ -0.61
GPN3-201ENST00000228827 HDHD3Q9BSH5 251 aaPredicted RBP11.23□□□□□ -0.61
GPN3-201ENST00000228827 URM1Q9BTM9 101 aaKnown RBP11.23□□□□□ -0.61
GPN3-201ENST00000228827 MRPL20Q9BYC9 149 aaKnown RBP11.23□□□□□ -0.61
GPN3-201ENST00000228827 ABCG5Q9H222 651 aa11.23□□□□□ -0.61
GPN3-201ENST00000228827 PLSCR3Q9NRY6 295 aa11.23□□□□□ -0.61
GPN3-201ENST00000228827 AK3Q9UIJ7 227 aa11.23□□□□□ -0.61
GPN3-201ENST00000228827 BLOC1S6Q9UL45 172 aa11.23□□□□□ -0.61
GPN3-201ENST00000228827 LANCL1O43813 399 aa11.22□□□□□ -0.61
GPN3-201ENST00000228827 YPEL1O60688 119 aa11.22□□□□□ -0.61
GPN3-201ENST00000228827 RGS11O94810 467 aa11.22□□□□□ -0.61
GPN3-201ENST00000228827 ATP6V1G2O95670 118 aa11.22□□□□□ -0.61
GPN3-201ENST00000228827 NAPSAO96009 420 aa11.22□□□□□ -0.61
GPN3-201ENST00000228827 OR3A3P47888 321 aa11.22□□□□□ -0.61
GPN3-201ENST00000228827 VEGFCP49767 419 aa11.22□□□□□ -0.61
GPN3-201ENST00000228827 RPL23AP62750 156 aaKnown RBP11.22□□□□□ -0.61
GPN3-201ENST00000228827 SLC35B1P78383 322 aa11.22□□□□□ -0.61
GPN3-201ENST00000228827 LSAMPQ13449 338 aa11.22□□□□□ -0.61
GPN3-201ENST00000228827 TBCEQ15813 527 aaPredicted RBP11.22□□□□□ -0.61
GPN3-201ENST00000228827 SSX1Q16384 188 aa11.22□□□□□ -0.61
GPN3-201ENST00000228827 HES5Q5TA89 166 aa11.22□□□□□ -0.61
GPN3-201ENST00000228827 STEAP3Q658P3 488 aa11.22□□□□□ -0.61
GPN3-201ENST00000228827 C18orf65Q6ZTR6 163 aa11.22□□□□□ -0.61
GPN3-201ENST00000228827 ODF3L1Q8IXM7 274 aa11.22□□□□□ -0.61
GPN3-201ENST00000228827 OR2AK2Q8NG84 335 aa11.22□□□□□ -0.61
GPN3-201ENST00000228827 PHF21AQ96BD5 680 aa11.22□□□□□ -0.61
GPN3-201ENST00000228827 YPEL2Q96QA6 119 aa11.22□□□□□ -0.61
GPN3-201ENST00000228827 ACOT13Q9NPJ3 140 aa11.22□□□□□ -0.61
GPN3-201ENST00000228827 LIN7CQ9NUP9 197 aaKnown RBP11.22□□□□□ -0.61
GPN3-201ENST00000228827 RAB26Q9ULW5 256 aa11.22□□□□□ -0.61
GPN3-201ENST00000228827 LRRC42Q9Y546 428 aa11.22□□□□□ -0.61
GPN3-201ENST00000228827 NUDT19A8MXV4 375 aa11.21□□□□□ -0.61
GPN3-201ENST00000228827 ST8SIA5O15466 376 aa11.21□□□□□ -0.61
GPN3-201ENST00000228827 SLC2A2P11168 524 aaPredicted RBP11.21□□□□□ -0.61
GPN3-201ENST00000228827 PLA2G7Q13093 441 aa11.21□□□□□ -0.61
GPN3-201ENST00000228827 ZNF880Q6PDB4 577 aa11.21□□□□□ -0.61
GPN3-201ENST00000228827 WFDC9Q8NEX5 89 aa11.21□□□□□ -0.61
GPN3-201ENST00000228827 FAM3DQ96BQ1 224 aa11.21□□□□□ -0.61
GPN3-201ENST00000228827 NABP2Q9BQ15 211 aa11.21□□□□□ -0.61
GPN3-201ENST00000228827 HSPB9Q9BQS6 159 aa11.21□□□□□ -0.61
GPN3-201ENST00000228827 V9GY05 133 aa11.21□□□□□ -0.61
GPN3-201ENST00000228827 SAA2-SAA4A0A096LPE2 208 aa11.2□□□□□ -0.62
GPN3-201ENST00000228827 AP4M1O00189 453 aa11.2□□□□□ -0.62
GPN3-201ENST00000228827 SAA2P0DJI9 122 aaPredicted RBP11.2□□□□□ -0.62
GPN3-201ENST00000228827 TMEM50BP56557 158 aa11.2□□□□□ -0.62
GPN3-201ENST00000228827 MMDQ15546 238 aa11.2□□□□□ -0.62
GPN3-201ENST00000228827 C2orf76Q3KRA6 126 aa11.2□□□□□ -0.62
GPN3-201ENST00000228827 FOXB2Q5VYV0 432 aa11.2□□□□□ -0.62
GPN3-201ENST00000228827 LCNL1Q6ZST4 164 aa11.2□□□□□ -0.62
GPN3-201ENST00000228827 C8orf86Q6ZUL3 223 aa11.2□□□□□ -0.62
GPN3-201ENST00000228827 FAM89BQ8N5H3 189 aa11.2□□□□□ -0.62
GPN3-201ENST00000228827 FAM71E2Q8N5Q1 922 aa11.2□□□□□ -0.62
GPN3-201ENST00000228827 OR8H1Q8NGG4 311 aa11.2□□□□□ -0.62
GPN3-201ENST00000228827 ARHGAP5-AS1Q96IT6 56 aa11.2□□□□□ -0.62
GPN3-201ENST00000228827 PARP12Q9H0J9 701 aaKnown RBP11.2□□□□□ -0.62
GPN3-201ENST00000228827 STEAP1Q9UHE8 339 aa11.2□□□□□ -0.62
GPN3-201ENST00000228827 PRKDCP78527 4128 aaKnown RBP11.2□□□□□ -0.62
GPN3-201ENST00000228827 TMEM272A0A1B0GTI8 110 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 FOXI3A8MTJ6 420 aaPredicted RBP11.19□□□□□ -0.62
GPN3-201ENST00000228827 CNTFRP26992 372 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 SOX6P35712 828 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 OR10A3P58181 314 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 ETV3LQ6ZN32 361 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 ZNF833PQ6ZTB9 187 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 MOB1BQ7L9L4 216 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 KLHL30-AS1Q8NEE0 82 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 RITA1Q96K30 269 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 PECRQ9BY49 303 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 IFI27L2Q9H2X8 130 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 RIMS4Q9H426 269 aaPredicted RBP11.19□□□□□ -0.62
GPN3-201ENST00000228827 NECAP2Q9NVZ3 263 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 OR1A1Q9P1Q5 309 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 SLC23A1Q9UHI7 598 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 SHISA3A0PJX4 238 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 PDCD5O14737 125 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 DENRO43583 198 aaKnown RBP11.19□□□□□ -0.62
GPN3-201ENST00000228827 ACTBP60709 375 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 HLA-DRB3P79483 266 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 PNLIPRP3Q17RR3 467 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 RPL39P5Q59GN2 51 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 LY6G6FQ5SQ64 297 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 COMMD1Q8N668 190 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 MRAPQ8TCY5 172 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 ABHD14BQ96IU4 210 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 CMSS1Q9BQ75 279 aaKnown RBP11.19□□□□□ -0.62
GPN3-201ENST00000228827 ZNF251Q9BRH9 671 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 C12orf4Q9NQ89 552 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 AURKAIP1Q9NWT8 199 aaPredicted RBP11.19□□□□□ -0.62
GPN3-201ENST00000228827 NDUFB11Q9NX14 153 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 ZNF107Q9UII5 783 aaPredicted RBP11.19□□□□□ -0.62
GPN3-201ENST00000228827 HSF4Q9ULV5 492 aa11.19□□□□□ -0.62
GPN3-201ENST00000228827 HSPA12AO43301 675 aa11.18□□□□□ -0.62
GPN3-201ENST00000228827 RPLP1P05386 114 aaKnown RBP11.18□□□□□ -0.62
GPN3-201ENST00000228827 SCTP09683 121 aa11.18□□□□□ -0.62
GPN3-201ENST00000228827 VDAC1P21796 283 aa11.18□□□□□ -0.62
GPN3-201ENST00000228827 MYL9P24844 172 aa11.18□□□□□ -0.62
GPN3-201ENST00000228827 CEACAM6P40199 344 aa11.18□□□□□ -0.62
GPN3-201ENST00000228827 PSMD7P51665 324 aa11.18□□□□□ -0.62
GPN3-201ENST00000228827 GABARAPL2P60520 117 aa11.18□□□□□ -0.62
GPN3-201ENST00000228827 PLAC9Q5JTB6 97 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms