RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 TMEM167BQ9NRX6 74 aa15.89■□□□□ 0.13
CLIP2-201ENST00000223398 HPRT1P00492 218 aa15.89■□□□□ 0.13
CLIP2-201ENST00000223398 C5orf17Q8NAS9 161 aa15.89■□□□□ 0.13
CLIP2-201ENST00000223398 GPHA2Q96T91 129 aa15.89■□□□□ 0.13
CLIP2-201ENST00000223398 CALYQ9NYX4 217 aa15.89■□□□□ 0.13
CLIP2-201ENST00000223398 KCNK7Q9Y2U2 307 aa15.89■□□□□ 0.13
CLIP2-201ENST00000223398 ODAMA1E959 279 aa15.88■□□□□ 0.13
CLIP2-201ENST00000223398 KIAA1324LA8MWY0 1029 aaPredicted RBP15.88■□□□□ 0.13
CLIP2-201ENST00000223398 FAM162BQ5T6X4 162 aa15.88■□□□□ 0.13
CLIP2-201ENST00000223398 CRHP06850 196 aa15.88■□□□□ 0.13
CLIP2-201ENST00000223398 MMP26Q9NRE1 261 aa15.88■□□□□ 0.13
CLIP2-201ENST00000223398 LEUTXA8MZ59 168 aa15.88■□□□□ 0.13
CLIP2-201ENST00000223398 DCAF12L2Q5VW00 463 aa15.88■□□□□ 0.13
CLIP2-201ENST00000223398 SLC2A8Q9NY64 477 aa15.88■□□□□ 0.13
CLIP2-201ENST00000223398 TMSB15BA0A087X1C1 80 aa15.87■□□□□ 0.13
CLIP2-201ENST00000223398 B9A039 149 aa15.87■□□□□ 0.13
CLIP2-201ENST00000223398 UMODP07911 640 aa15.87■□□□□ 0.13
CLIP2-201ENST00000223398 CSRP1P21291 193 aaKnown RBP15.87■□□□□ 0.13
CLIP2-201ENST00000223398 EGR4Q05215 589 aa15.87■□□□□ 0.13
CLIP2-201ENST00000223398 KLF9Q13886 244 aaPredicted RBP15.87■□□□□ 0.13
CLIP2-201ENST00000223398 ABHD12Q8N2K0 398 aa15.87■□□□□ 0.13
CLIP2-201ENST00000223398 EWSR1Q01844 656 aaKnown RBP eCLIP15.87■□□□□ 0.13
CLIP2-201ENST00000223398 PNKDQ8N490 385 aa15.87■□□□□ 0.13
CLIP2-201ENST00000223398 PRSS3P2Q8NHM4 247 aa15.87■□□□□ 0.13
CLIP2-201ENST00000223398 IDI2-AS1Q9NZ38 188 aa15.87■□□□□ 0.13
CLIP2-201ENST00000223398 NDUFA2O43678 99 aa15.87■□□□□ 0.13
CLIP2-201ENST00000223398 TEPPQ6URK8 271 aa15.87■□□□□ 0.13
CLIP2-201ENST00000223398 MRPS18AQ9NVS2 196 aaKnown RBP15.87■□□□□ 0.13
CLIP2-201ENST00000223398 DLL3Q9NYJ7 618 aa15.87■□□□□ 0.13
CLIP2-201ENST00000223398 WASHC3Q9Y3C0 194 aa15.87■□□□□ 0.13
CLIP2-201ENST00000223398 IGHV3OR16-12A0A075B7B8 117 aa15.87■□□□□ 0.13
CLIP2-201ENST00000223398 SLC25A17O43808 307 aa15.87■□□□□ 0.13
CLIP2-201ENST00000223398 PRDM14Q9GZV8 571 aa15.87■□□□□ 0.13
CLIP2-201ENST00000223398 DSPPQ9NZW4 1301 aa15.87■□□□□ 0.13
CLIP2-201ENST00000223398 A0A1B0GU03 582 aa15.86■□□□□ 0.13
CLIP2-201ENST00000223398 FAM157CP0CG43 387 aa15.86■□□□□ 0.13
CLIP2-201ENST00000223398 RNF224P0DH78 156 aa15.86■□□□□ 0.13
CLIP2-201ENST00000223398 RCC1P18754 421 aaPredicted RBP15.86■□□□□ 0.13
CLIP2-201ENST00000223398 APOBEC3AP31941 199 aaPredicted RBP15.86■□□□□ 0.13
CLIP2-201ENST00000223398 ERVS71-1P61550 626 aa15.86■□□□□ 0.13
CLIP2-201ENST00000223398 FAM57AQ8TBR7 257 aa15.86■□□□□ 0.13
CLIP2-201ENST00000223398 C11orf94C9JXX5 98 aa15.86■□□□□ 0.13
CLIP2-201ENST00000223398 CSN3P07498 182 aa15.86■□□□□ 0.13
CLIP2-201ENST00000223398 SULT1A1P50225 295 aa15.86■□□□□ 0.13
CLIP2-201ENST00000223398 LCN2P80188 198 aa15.86■□□□□ 0.13
CLIP2-201ENST00000223398 BSPH1Q075Z2 132 aa15.86■□□□□ 0.13
CLIP2-201ENST00000223398 MGPP08493 103 aa15.86■□□□□ 0.13
CLIP2-201ENST00000223398 CXCL3P19876 107 aa15.86■□□□□ 0.13
CLIP2-201ENST00000223398 CD40P25942 277 aa15.86■□□□□ 0.13
CLIP2-201ENST00000223398 ID1P41134 155 aa15.86■□□□□ 0.13
CLIP2-201ENST00000223398 GLIPR1P48060 266 aa15.86■□□□□ 0.13
CLIP2-201ENST00000223398 RPEL1Q2QD12 228 aa15.86■□□□□ 0.13
CLIP2-201ENST00000223398 NHLRC2Q8NBF2 726 aa15.86■□□□□ 0.13
CLIP2-201ENST00000223398 LPAR5Q9H1C0 372 aa15.86■□□□□ 0.13
CLIP2-201ENST00000223398 Q1RN00 199 aa15.86■□□□□ 0.13
CLIP2-201ENST00000223398 NXF2Q9GZY0 626 aaKnown RBP15.86■□□□□ 0.13
CLIP2-201ENST00000223398 FAM206AQ9NX38 181 aa15.86■□□□□ 0.13
CLIP2-201ENST00000223398 IL19Q9UHD0 177 aa15.86■□□□□ 0.13
CLIP2-201ENST00000223398 MC5RP33032 325 aa15.86■□□□□ 0.13
CLIP2-201ENST00000223398 ROM1Q03395 351 aa15.86■□□□□ 0.13
CLIP2-201ENST00000223398 SPACA3Q8IXA5 215 aa15.86■□□□□ 0.13
CLIP2-201ENST00000223398 CHRNA10Q9GZZ6 450 aa15.86■□□□□ 0.13
CLIP2-201ENST00000223398 CPN1P15169 458 aa15.85■□□□□ 0.13
CLIP2-201ENST00000223398 ZNF137PP52743 207 aa15.85■□□□□ 0.13
CLIP2-201ENST00000223398 CRYBA2P53672 197 aa15.85■□□□□ 0.13
CLIP2-201ENST00000223398 ZNF66Q6ZN08 573 aa15.85■□□□□ 0.13
CLIP2-201ENST00000223398 COMMD1Q8N668 190 aa15.85■□□□□ 0.13
CLIP2-201ENST00000223398 TMEM204Q9BSN7 226 aa15.85■□□□□ 0.13
CLIP2-201ENST00000223398 DCTN5Q9BTE1 182 aa15.85■□□□□ 0.13
CLIP2-201ENST00000223398 FCN1O00602 326 aa15.85■□□□□ 0.13
CLIP2-201ENST00000223398 NPBWR2P48146 333 aa15.85■□□□□ 0.13
CLIP2-201ENST00000223398 PTTG1IPP53801 180 aa15.85■□□□□ 0.13
CLIP2-201ENST00000223398 CRIPAKQ8N1N5 446 aa15.85■□□□□ 0.13
CLIP2-201ENST00000223398 SRD5A3Q9H8P0 318 aa15.85■□□□□ 0.13
CLIP2-201ENST00000223398 ARPC4-TTLL3A0A0A6YYG9 625 aa15.85■□□□□ 0.13
CLIP2-201ENST00000223398 CGB1A6NKQ9 187 aa15.85■□□□□ 0.13
CLIP2-201ENST00000223398 FAM201AQ5SY85 155 aa15.85■□□□□ 0.13
CLIP2-201ENST00000223398 HIGD1AQ9Y241 93 aa15.85■□□□□ 0.13
CLIP2-201ENST00000223398 IFNL4K9M1U5 179 aa15.84■□□□□ 0.13
CLIP2-201ENST00000223398 WNT9BO14905 357 aa15.84■□□□□ 0.13
CLIP2-201ENST00000223398 ZNRF1Q8ND25 227 aa15.84■□□□□ 0.13
CLIP2-201ENST00000223398 SLC35B3Q9H1N7 401 aa15.84■□□□□ 0.13
CLIP2-201ENST00000223398 TMPRSS5Q9H3S3 457 aa15.84■□□□□ 0.13
CLIP2-201ENST00000223398 FOXD3Q9UJU5 478 aaPredicted RBP15.84■□□□□ 0.13
CLIP2-201ENST00000223398 KCNAB3O43448 404 aa15.84■□□□□ 0.13
CLIP2-201ENST00000223398 CECR9P0C854 216 aa15.84■□□□□ 0.13
CLIP2-201ENST00000223398 CD59P13987 128 aa15.84■□□□□ 0.13
CLIP2-201ENST00000223398 RANP62826 216 aaKnown RBP15.84■□□□□ 0.13
CLIP2-201ENST00000223398 TIMM23BQ5SRD1 257 aa15.84■□□□□ 0.13
CLIP2-201ENST00000223398 NIT2Q9NQR4 276 aa15.84■□□□□ 0.13
CLIP2-201ENST00000223398 LTBP1Q14766 1721 aa15.84■□□□□ 0.13
CLIP2-201ENST00000223398 IGKV3D-11A0A0A0MRZ8 115 aa15.84■□□□□ 0.13
CLIP2-201ENST00000223398 PLAUP00749 431 aa15.84■□□□□ 0.13
CLIP2-201ENST00000223398 COL8A1P27658 744 aa15.84■□□□□ 0.13
CLIP2-201ENST00000223398 TMEM54Q969K7 222 aa15.84■□□□□ 0.13
CLIP2-201ENST00000223398 FSTP19883 344 aa15.84■□□□□ 0.13
CLIP2-201ENST00000223398 TEX29Q8N6K0 151 aa15.84■□□□□ 0.13
CLIP2-201ENST00000223398 OR4A5Q8NH83 315 aa15.84■□□□□ 0.13
CLIP2-201ENST00000223398 FAM216AQ8WUB2 273 aa15.84■□□□□ 0.13
CLIP2-201ENST00000223398 GHITMQ9H3K2 345 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms