RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 NCS1P62166 190 aa10.14□□□□□ -0.79
LSM5-201ENST00000223084 ZNF816Q0VGE8 651 aaPredicted RBP10.14□□□□□ -0.79
LSM5-201ENST00000223084 HNF4GQ14541 408 aa10.14□□□□□ -0.79
LSM5-201ENST00000223084 CDNFQ49AH0 187 aa10.14□□□□□ -0.79
LSM5-201ENST00000223084 DMRTA1Q5VZB9 504 aa10.14□□□□□ -0.79
LSM5-201ENST00000223084 SHISA2Q6UWI4 295 aa10.14□□□□□ -0.79
LSM5-201ENST00000223084 OR8H3Q8N146 312 aa10.14□□□□□ -0.79
LSM5-201ENST00000223084 LYG1Q8N1E2 194 aa10.14□□□□□ -0.79
LSM5-201ENST00000223084 YPEL2Q96QA6 119 aa10.14□□□□□ -0.79
LSM5-201ENST00000223084 SLC25A33Q9BSK2 321 aa10.14□□□□□ -0.79
LSM5-201ENST00000223084 ABHD14AQ9BUJ0 271 aa10.14□□□□□ -0.79
LSM5-201ENST00000223084 NAA50Q9GZZ1 169 aaKnown RBP10.14□□□□□ -0.79
LSM5-201ENST00000223084 RANBP3Q9H6Z4 567 aaPredicted RBP10.14□□□□□ -0.79
LSM5-201ENST00000223084 OR1A1Q9P1Q5 309 aa10.14□□□□□ -0.79
LSM5-201ENST00000223084 ZNF230Q9UIE0 474 aaPredicted RBP10.14□□□□□ -0.79
LSM5-201ENST00000223084 IGKV1-6A0A0C4DH72 117 aa10.13□□□□□ -0.79
LSM5-201ENST00000223084 ZNF736B4DX44 427 aaPredicted RBP10.13□□□□□ -0.79
LSM5-201ENST00000223084 TRDCB7Z8K6 153 aa10.13□□□□□ -0.79
LSM5-201ENST00000223084 ST8SIA5O15466 376 aa10.13□□□□□ -0.79
LSM5-201ENST00000223084 IGKV1D-33P01593 117 aa10.13□□□□□ -0.79
LSM5-201ENST00000223084 IGKV1-33P01594 117 aa10.13□□□□□ -0.79
LSM5-201ENST00000223084 FCGR3AP08637 254 aa10.13□□□□□ -0.79
LSM5-201ENST00000223084 FAM106CPP0CH98 169 aa10.13□□□□□ -0.79
LSM5-201ENST00000223084 IL3RAP26951 378 aa10.13□□□□□ -0.79
LSM5-201ENST00000223084 VBP1P61758 197 aa10.13□□□□□ -0.79
LSM5-201ENST00000223084 MRPS15P82914 257 aaKnown RBP10.13□□□□□ -0.79
LSM5-201ENST00000223084 ARFRP1Q13795 201 aa10.13□□□□□ -0.79
LSM5-201ENST00000223084 HES1Q14469 280 aa10.13□□□□□ -0.79
LSM5-201ENST00000223084 TMEM95Q3KNT9 176 aa10.13□□□□□ -0.79
LSM5-201ENST00000223084 HIST2H2BDQ6DRA6 164 aa10.13□□□□□ -0.79
LSM5-201ENST00000223084 IZUMO1Q8IYV9 350 aa10.13□□□□□ -0.79
LSM5-201ENST00000223084 RTN4IP1Q8WWV3 396 aaPredicted RBP10.13□□□□□ -0.79
LSM5-201ENST00000223084 SLC25A38Q96DW6 304 aa10.13□□□□□ -0.79
LSM5-201ENST00000223084 RBM14Q96PK6 669 aaKnown RBP10.13□□□□□ -0.79
LSM5-201ENST00000223084 MRPS26Q9BYN8 205 aaKnown RBP10.13□□□□□ -0.79
LSM5-201ENST00000223084 RHBDL2Q9NX52 303 aa10.13□□□□□ -0.79
LSM5-201ENST00000223084 SLC23A1Q9UHI7 598 aa10.13□□□□□ -0.79
LSM5-201ENST00000223084 SERPINE3A8MV23 424 aa10.12□□□□□ -0.79
LSM5-201ENST00000223084 RGS11O94810 467 aa10.12□□□□□ -0.79
LSM5-201ENST00000223084 OR2F2O95006 317 aa10.12□□□□□ -0.79
LSM5-201ENST00000223084 CEACAM6P40199 344 aa10.12□□□□□ -0.79
LSM5-201ENST00000223084 OR3A3P47888 321 aa10.12□□□□□ -0.79
LSM5-201ENST00000223084 SERPINB10P48595 397 aa10.12□□□□□ -0.79
LSM5-201ENST00000223084 ZNF137PP52743 207 aa10.12□□□□□ -0.79
LSM5-201ENST00000223084 HERPUD1Q15011 391 aa10.12□□□□□ -0.79
LSM5-201ENST00000223084 STEAP3Q658P3 488 aa10.12□□□□□ -0.79
LSM5-201ENST00000223084 THNSL2Q86YJ6 484 aa10.12□□□□□ -0.79
LSM5-201ENST00000223084 TGIF2LXQ8IUE1 241 aa10.12□□□□□ -0.79
LSM5-201ENST00000223084 ODF3L1Q8IXM7 274 aa10.12□□□□□ -0.79
LSM5-201ENST00000223084 Q8N2B8 174 aa10.12□□□□□ -0.79
LSM5-201ENST00000223084 OR2AK2Q8NG84 335 aa10.12□□□□□ -0.79
LSM5-201ENST00000223084 OR2T6Q8NHC8 308 aa10.12□□□□□ -0.79
LSM5-201ENST00000223084 PRSS22Q9GZN4 317 aa10.12□□□□□ -0.79
LSM5-201ENST00000223084 MGAT4AQ9UM21 535 aa10.12□□□□□ -0.79
LSM5-201ENST00000223084 IGKV1D-8A0A087WSZ0 117 aa10.11□□□□□ -0.79
LSM5-201ENST00000223084 TMEM235A6NFC5 223 aa10.11□□□□□ -0.79
LSM5-201ENST00000223084 FABP7O15540 132 aa10.11□□□□□ -0.79
LSM5-201ENST00000223084 HSPA12AO43301 675 aa10.11□□□□□ -0.79
LSM5-201ENST00000223084 LANCL1O43813 399 aa10.11□□□□□ -0.79
LSM5-201ENST00000223084 AMY1AP04745 511 aa10.11□□□□□ -0.79
LSM5-201ENST00000223084 AMY2AP04746 511 aa10.11□□□□□ -0.79
LSM5-201ENST00000223084 GSTT2P0CG29 244 aa10.11□□□□□ -0.79
LSM5-201ENST00000223084 GSTT2BP0CG30 244 aa10.11□□□□□ -0.79
LSM5-201ENST00000223084 VSIG10L2P0DP72 767 aa10.11□□□□□ -0.79
LSM5-201ENST00000223084 TMEM11P17152 192 aa10.11□□□□□ -0.79
LSM5-201ENST00000223084 TALDO1P37837 337 aa10.11□□□□□ -0.79
LSM5-201ENST00000223084 ZNF260Q3ZCT1 412 aa10.11□□□□□ -0.79
LSM5-201ENST00000223084 ABCA11PQ4W5N1 156 aa10.11□□□□□ -0.79
LSM5-201ENST00000223084 IGSF11Q5DX21 431 aa10.11□□□□□ -0.79
LSM5-201ENST00000223084 LY6G6FQ5SQ64 297 aa10.11□□□□□ -0.79
LSM5-201ENST00000223084 GPR107Q5VW38 600 aa10.11□□□□□ -0.79
LSM5-201ENST00000223084 C16orf82Q7Z2V1 217 aa10.11□□□□□ -0.79
LSM5-201ENST00000223084 KLHDC1Q8N7A1 406 aa10.11□□□□□ -0.79
LSM5-201ENST00000223084 DTX3Q8N9I9 347 aa10.11□□□□□ -0.79
LSM5-201ENST00000223084 NUDCD2Q8WVJ2 157 aa10.11□□□□□ -0.79
LSM5-201ENST00000223084 CITED1Q99966 193 aa10.11□□□□□ -0.79
LSM5-201ENST00000223084 C11orf54Q9H0W9 315 aaPredicted RBP10.11□□□□□ -0.79
LSM5-201ENST00000223084 IFI27L2Q9H2X8 130 aa10.11□□□□□ -0.79
LSM5-201ENST00000223084 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.11□□□□□ -0.79
LSM5-201ENST00000223084 SERTAD4Q9NUC0 356 aa10.11□□□□□ -0.79
LSM5-201ENST00000223084 SPATA2Q9UM82 520 aa10.11□□□□□ -0.79
LSM5-201ENST00000223084 ETV7Q9Y603 341 aa10.11□□□□□ -0.79
LSM5-201ENST00000223084 WNK1Q9H4A3 2382 aa10.1□□□□□ -0.79
LSM5-201ENST00000223084 TRAV18A0A075B6X5 111 aa10.1□□□□□ -0.79
LSM5-201ENST00000223084 SAA2-SAA4A0A096LPE2 208 aa10.1□□□□□ -0.79
LSM5-201ENST00000223084 BET1O15155 118 aa10.1□□□□□ -0.79
LSM5-201ENST00000223084 TFAP2AP05549 437 aa10.1□□□□□ -0.79
LSM5-201ENST00000223084 SAA2P0DJI9 122 aaPredicted RBP10.1□□□□□ -0.79
LSM5-201ENST00000223084 ZBTB25P24278 435 aa10.1□□□□□ -0.79
LSM5-201ENST00000223084 ALDH3B2P48448 385 aa10.1□□□□□ -0.79
LSM5-201ENST00000223084 SCAND1P57086 179 aa10.1□□□□□ -0.79
LSM5-201ENST00000223084 EBI3Q14213 229 aa10.1□□□□□ -0.79
LSM5-201ENST00000223084 RPL39P5Q59GN2 51 aa10.1□□□□□ -0.79
LSM5-201ENST00000223084 ARSJQ5FYB0 599 aaPredicted RBP10.1□□□□□ -0.79
LSM5-201ENST00000223084 HACD4Q5VWC8 232 aa10.1□□□□□ -0.79
LSM5-201ENST00000223084 ANKRD13BQ86YJ7 626 aa10.1□□□□□ -0.79
LSM5-201ENST00000223084 CROCCP3Q8IVE0 287 aa10.1□□□□□ -0.79
LSM5-201ENST00000223084 C11orf44Q8N8P7 122 aa10.1□□□□□ -0.79
LSM5-201ENST00000223084 OR4A4PQ8NGN8 299 aa10.1□□□□□ -0.79
LSM5-201ENST00000223084 PHF21AQ96BD5 680 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms