RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 HEPN1Q6WQI6 88 aa18.75■□□□□ 0.59
CCDC9-201ENST00000221922 ZNF497Q6ZNH5 498 aa18.75■□□□□ 0.59
CCDC9-201ENST00000221922 ZNF295-AS1Q8N0V1 137 aa18.75■□□□□ 0.59
CCDC9-201ENST00000221922 MUCL1Q96DR8 90 aa18.75■□□□□ 0.59
CCDC9-201ENST00000221922 RBMXL1Q96E39 390 aaKnown RBP18.75■□□□□ 0.59
CCDC9-201ENST00000221922 TCEAL7Q9BRU2 100 aa18.75■□□□□ 0.59
CCDC9-201ENST00000221922 A0A087WWC5 75 aa18.74■□□□□ 0.59
CCDC9-201ENST00000221922 SIRPB1O00241 398 aa18.74■□□□□ 0.59
CCDC9-201ENST00000221922 SLC33A1O00400 549 aaPredicted RBP18.74■□□□□ 0.59
CCDC9-201ENST00000221922 SH2D1BO14796 132 aa18.74■□□□□ 0.59
CCDC9-201ENST00000221922 DFFBO76075 338 aa18.74■□□□□ 0.59
CCDC9-201ENST00000221922 SCAF4O95104 1147 aaKnown RBP18.74■□□□□ 0.59
CCDC9-201ENST00000221922 NXPH2O95156 264 aa18.74■□□□□ 0.59
CCDC9-201ENST00000221922 S100A9P06702 114 aaKnown RBP18.74■□□□□ 0.59
CCDC9-201ENST00000221922 PSG7Q13046 419 aa18.74■□□□□ 0.59
CCDC9-201ENST00000221922 VWA1Q6PCB0 445 aa18.74■□□□□ 0.59
CCDC9-201ENST00000221922 TRAV1-1A0A0B4J248 108 aa18.73■□□□□ 0.59
CCDC9-201ENST00000221922 TXNL1O43396 289 aa18.73■□□□□ 0.59
CCDC9-201ENST00000221922 NXPH3O95157 252 aa18.73■□□□□ 0.59
CCDC9-201ENST00000221922 HBE1P02100 147 aa18.73■□□□□ 0.59
CCDC9-201ENST00000221922 EIF2S3P41091 472 aaKnown RBP18.73■□□□□ 0.59
CCDC9-201ENST00000221922 HAGHQ16775 308 aa18.73■□□□□ 0.59
CCDC9-201ENST00000221922 STX12Q86Y82 276 aa18.73■□□□□ 0.59
CCDC9-201ENST00000221922 OR10V1Q8NGI7 309 aa18.73■□□□□ 0.59
CCDC9-201ENST00000221922 CLDND2Q8NHS1 167 aa18.73■□□□□ 0.59
CCDC9-201ENST00000221922 RAB40CQ96S21 281 aa18.73■□□□□ 0.59
CCDC9-201ENST00000221922 ERRFI1Q9UJM3 462 aaPredicted RBP18.73■□□□□ 0.59
CCDC9-201ENST00000221922 DMXL1Q9Y485 3027 aa18.73■□□□□ 0.59
CCDC9-201ENST00000221922 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.73■□□□□ 0.59
CCDC9-201ENST00000221922 IGKV3-15P01624 115 aa18.73■□□□□ 0.59
CCDC9-201ENST00000221922 OR8U8P0C7N1 319 aa18.73■□□□□ 0.59
CCDC9-201ENST00000221922 TUBG1P23258 451 aa18.73■□□□□ 0.59
CCDC9-201ENST00000221922 IGFBP7Q16270 282 aa18.73■□□□□ 0.59
CCDC9-201ENST00000221922 NANPQ8TBE9 248 aa18.73■□□□□ 0.59
CCDC9-201ENST00000221922 IL1F10Q8WWZ1 152 aa18.73■□□□□ 0.59
CCDC9-201ENST00000221922 RAB39BQ96DA2 213 aa18.73■□□□□ 0.59
CCDC9-201ENST00000221922 TUBG2Q9NRH3 451 aa18.73■□□□□ 0.59
CCDC9-201ENST00000221922 PLSCR4Q9NRQ2 329 aa18.73■□□□□ 0.59
CCDC9-201ENST00000221922 TRAPPC2LQ9UL33 140 aa18.73■□□□□ 0.59
CCDC9-201ENST00000221922 AP4M1O00189 453 aa18.72■□□□□ 0.59
CCDC9-201ENST00000221922 CDIPTO14735 213 aa18.72■□□□□ 0.59
CCDC9-201ENST00000221922 SERPINE2P07093 398 aa18.72■□□□□ 0.59
CCDC9-201ENST00000221922 OR2B8PP59922 312 aa18.72■□□□□ 0.59
CCDC9-201ENST00000221922 RPL23AP62750 156 aaKnown RBP18.72■□□□□ 0.59
CCDC9-201ENST00000221922 KLF14Q8TD94 323 aaPredicted RBP18.72■□□□□ 0.59
CCDC9-201ENST00000221922 ZNF251Q9BRH9 671 aa18.72■□□□□ 0.59
CCDC9-201ENST00000221922 LRFN3Q9BTN0 628 aa18.72■□□□□ 0.59
CCDC9-201ENST00000221922 IFNA17P01571 189 aa18.72■□□□□ 0.59
CCDC9-201ENST00000221922 PSG2P11465 335 aa18.72■□□□□ 0.59
CCDC9-201ENST00000221922 RAB2AP61019 212 aa18.72■□□□□ 0.59
CCDC9-201ENST00000221922 ALKBH6Q3KRA9 238 aa18.72■□□□□ 0.59
CCDC9-201ENST00000221922 SLC16A13Q7RTY0 426 aa18.72■□□□□ 0.59
CCDC9-201ENST00000221922 WDR31Q8NA23 367 aa18.72■□□□□ 0.59
CCDC9-201ENST00000221922 LSM10Q969L4 123 aaKnown RBP18.72■□□□□ 0.59
CCDC9-201ENST00000221922 DKK4Q9UBT3 224 aa18.72■□□□□ 0.59
CCDC9-201ENST00000221922 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.71■□□□□ 0.59
CCDC9-201ENST00000221922 OR51H1Q8NH63 302 aa18.71■□□□□ 0.59
CCDC9-201ENST00000221922 WSB1Q9Y6I7 421 aa18.71■□□□□ 0.59
CCDC9-201ENST00000221922 C3orf80F5H4A9 247 aa18.7■□□□□ 0.58
CCDC9-201ENST00000221922 IGLV2-14P01704 120 aa18.7■□□□□ 0.58
CCDC9-201ENST00000221922 FOXF2Q12947 444 aa18.7■□□□□ 0.58
CCDC9-201ENST00000221922 KHDC3LQ587J8 217 aa18.7■□□□□ 0.58
CCDC9-201ENST00000221922 ZNF429Q86V71 674 aa18.7■□□□□ 0.58
CCDC9-201ENST00000221922 CYB561D1Q8N8Q1 229 aa18.7■□□□□ 0.58
CCDC9-201ENST00000221922 OR10G4Q8NGN3 311 aa18.7■□□□□ 0.58
CCDC9-201ENST00000221922 OBP2BQ9NPH6 170 aa18.7■□□□□ 0.58
CCDC9-201ENST00000221922 MBNL3Q9NUK0 354 aaKnown RBP18.7■□□□□ 0.58
CCDC9-201ENST00000221922 OR1A1Q9P1Q5 309 aa18.7■□□□□ 0.58
CCDC9-201ENST00000221922 WIPI2Q9Y4P8 454 aa18.7■□□□□ 0.58
CCDC9-201ENST00000221922 GRPP07492 148 aa18.7■□□□□ 0.58
CCDC9-201ENST00000221922 NQO2P16083 231 aa18.7■□□□□ 0.58
CCDC9-201ENST00000221922 MPV17P39210 176 aa18.7■□□□□ 0.58
CCDC9-201ENST00000221922 Q6ZRM9 215 aa18.7■□□□□ 0.58
CCDC9-201ENST00000221922 H0YL77 283 aa18.69■□□□□ 0.58
CCDC9-201ENST00000221922 TNFSF13O75888 250 aa18.69■□□□□ 0.58
CCDC9-201ENST00000221922 IFNA5P01569 189 aa18.69■□□□□ 0.58
CCDC9-201ENST00000221922 IGKV1-39P01597 117 aa18.69■□□□□ 0.58
CCDC9-201ENST00000221922 IGKV1D-39P04432 117 aa18.69■□□□□ 0.58
CCDC9-201ENST00000221922 TAGLN2P37802 199 aaKnown RBP18.69■□□□□ 0.58
CCDC9-201ENST00000221922 UBE2KP61086 200 aa18.69■□□□□ 0.58
CCDC9-201ENST00000221922 Q6ZS92 163 aa18.69■□□□□ 0.58
CCDC9-201ENST00000221922 THNSL2Q86YJ6 484 aa18.69■□□□□ 0.58
CCDC9-201ENST00000221922 TCTEX1D2Q8WW35 142 aa18.69■□□□□ 0.58
CCDC9-201ENST00000221922 HES4Q9HCC6 221 aa18.69■□□□□ 0.58
CCDC9-201ENST00000221922 MBD3L4A6NDZ8 208 aaPredicted RBP18.69■□□□□ 0.58
CCDC9-201ENST00000221922 MBD3L3A6NE82 208 aaPredicted RBP18.69■□□□□ 0.58
CCDC9-201ENST00000221922 MBD3L5A6NJ08 208 aaPredicted RBP18.69■□□□□ 0.58
CCDC9-201ENST00000221922 HAND1O96004 215 aa18.69■□□□□ 0.58
CCDC9-201ENST00000221922 DLK1P80370 383 aa18.69■□□□□ 0.58
CCDC9-201ENST00000221922 TESK1Q15569 626 aa18.69■□□□□ 0.58
CCDC9-201ENST00000221922 SLC35E3Q7Z769 313 aa18.69■□□□□ 0.58
CCDC9-201ENST00000221922 MBD3L2Q8NHZ7 208 aaPredicted RBP18.69■□□□□ 0.58
CCDC9-201ENST00000221922 TVP23CQ96ET8 276 aa18.69■□□□□ 0.58
CCDC9-201ENST00000221922 CXXC4Q9H2H0 198 aa18.69■□□□□ 0.58
CCDC9-201ENST00000221922 WDR1O75083 606 aa18.68■□□□□ 0.58
CCDC9-201ENST00000221922 CGAP01215 116 aa18.68■□□□□ 0.58
CCDC9-201ENST00000221922 FBP1P09467 338 aa18.68■□□□□ 0.58
CCDC9-201ENST00000221922 BCL2L14Q9BZR8 327 aa18.68■□□□□ 0.58
CCDC9-201ENST00000221922 TINAGQ9UJW2 476 aa18.68■□□□□ 0.58
CCDC9-201ENST00000221922 PROCRQ9UNN8 238 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms