RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 BCL2L2Q92843 193 aaPredicted RBP11.26□□□□□ -0.61
SRP54-201ENST00000216774 WDR61Q9GZS3 305 aaKnown RBP11.26□□□□□ -0.61
SRP54-201ENST00000216774 VSIRQ9H7M9 311 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 VAX2Q9UIW0 290 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 KCNS2Q9ULS6 477 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 WIPI2Q9Y4P8 454 aa11.26□□□□□ -0.61
SRP54-201ENST00000216774 RBM7Q9Y580 266 aaKnown RBP11.26□□□□□ -0.61
SRP54-201ENST00000216774 ELOA3CA0A087WX78 387 aaPredicted RBP11.25□□□□□ -0.61
SRP54-201ENST00000216774 TRAV20A0A0B4J274 112 aa11.25□□□□□ -0.61
SRP54-201ENST00000216774 A0A1W2PR80 420 aa11.25□□□□□ -0.61
SRP54-201ENST00000216774 C21orf140B9A014 251 aa11.25□□□□□ -0.61
SRP54-201ENST00000216774 C9orf172C9J069 976 aa11.25□□□□□ -0.61
SRP54-201ENST00000216774 PDGFBP01127 241 aaPredicted RBP11.25□□□□□ -0.61
SRP54-201ENST00000216774 FAM210BQ96KR6 192 aa11.25□□□□□ -0.61
SRP54-201ENST00000216774 SDF2L1Q9HCN8 221 aa11.25□□□□□ -0.61
SRP54-201ENST00000216774 PRSS50Q9UI38 385 aa11.25□□□□□ -0.61
SRP54-201ENST00000216774 SIRPB1O00241 398 aa11.25□□□□□ -0.61
SRP54-201ENST00000216774 MT-CO3P00414 261 aa11.25□□□□□ -0.61
SRP54-201ENST00000216774 FAM209BQ5JX69 171 aa11.25□□□□□ -0.61
SRP54-201ENST00000216774 DCAF10Q5QP82 559 aa11.25□□□□□ -0.61
SRP54-201ENST00000216774 FBXW9Q5XUX1 488 aa11.25□□□□□ -0.61
SRP54-201ENST00000216774 DBX2Q6ZNG2 339 aa11.25□□□□□ -0.61
SRP54-201ENST00000216774 MDP1Q86V88 176 aa11.25□□□□□ -0.61
SRP54-201ENST00000216774 PRR18Q8N4B5 295 aa11.25□□□□□ -0.61
SRP54-201ENST00000216774 TMEM105Q8N8V8 129 aa11.25□□□□□ -0.61
SRP54-201ENST00000216774 SCCPDHQ8NBX0 429 aa11.25□□□□□ -0.61
SRP54-201ENST00000216774 BCL2L14Q9BZR8 327 aa11.25□□□□□ -0.61
SRP54-201ENST00000216774 CTDSP1Q9GZU7 261 aa11.25□□□□□ -0.61
SRP54-201ENST00000216774 OR51B6Q9H340 312 aa11.25□□□□□ -0.61
SRP54-201ENST00000216774 ZMAT5Q9UDW3 170 aaKnown RBP11.25□□□□□ -0.61
SRP54-201ENST00000216774 TIMM9Q9Y5J7 89 aa11.25□□□□□ -0.61
SRP54-201ENST00000216774 ATXN7O15265 892 aaPredicted RBP11.24□□□□□ -0.61
SRP54-201ENST00000216774 TRGC2P03986 189 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 ZNF883P0CG24 379 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 ZNF16P17020 682 aaPredicted RBP11.24□□□□□ -0.61
SRP54-201ENST00000216774 SPINK2P20155 84 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 CEACAM6P40199 344 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 NKX6-1P78426 367 aaPredicted RBP11.24□□□□□ -0.61
SRP54-201ENST00000216774 ZNF146Q15072 292 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 TBC1D28Q2M2D7 210 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 SSX7Q7RTT5 188 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 DRAM1Q8N682 238 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 TAF15Q92804 592 aaKnown RBP eCLIP11.24□□□□□ -0.61
SRP54-201ENST00000216774 OR4C12Q96R67 309 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 FREM2Q5SZK8 3169 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 TRBV24-1A0A075B6N3 115 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 TRAV39A0A0B4J263 110 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 MAP1LC3B2A6NCE7 125 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 C19orf67A6NJJ6 358 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 SH2D1BO14796 132 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 PPP1R2P9O14990 202 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 WDR1O75083 606 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 OPN1MWP04001 364 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 PGA5P0DJD9 388 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 OPN1MW2P0DN77 364 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 OPN1MW3P0DN78 364 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 PYY3Q5JQD4 70 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 SPANXN5Q5MJ07 72 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 SPATA46Q5T0L3 261 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 TMEM14EPQ6UXP3 125 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 CENPVQ7Z7K6 275 aaPredicted RBP11.24□□□□□ -0.61
SRP54-201ENST00000216774 WDR86Q86TI4 376 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 FGFRL1Q8N441 504 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 ZBTB34Q8NCN2 500 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 AGMATQ9BSE5 352 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 MAP1LC3BQ9GZQ8 125 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 PLA2G3Q9NZ20 509 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 TINAGQ9UJW2 476 aa11.24□□□□□ -0.61
SRP54-201ENST00000216774 KLF13Q9Y2Y9 288 aaPredicted RBP11.24□□□□□ -0.61
SRP54-201ENST00000216774 C3orf80F5H4A9 247 aa11.23□□□□□ -0.61
SRP54-201ENST00000216774 FGF8P55075 233 aaPredicted RBP11.23□□□□□ -0.61
SRP54-201ENST00000216774 SLC38A11Q08AI6 406 aa11.23□□□□□ -0.61
SRP54-201ENST00000216774 C3AR1Q16581 482 aa11.23□□□□□ -0.61
SRP54-201ENST00000216774 SPNS3Q6ZMD2 512 aa11.23□□□□□ -0.61
SRP54-201ENST00000216774 LINC00696Q6ZRV3 163 aa11.23□□□□□ -0.61
SRP54-201ENST00000216774 C12orf49Q9H741 205 aa11.23□□□□□ -0.61
SRP54-201ENST00000216774 FOXJ2Q9P0K8 574 aa11.23□□□□□ -0.61
SRP54-201ENST00000216774 NXPH2O95156 264 aa11.23□□□□□ -0.61
SRP54-201ENST00000216774 SP1P08047 785 aa11.23□□□□□ -0.61
SRP54-201ENST00000216774 MEOX1P50221 254 aa11.23□□□□□ -0.61
SRP54-201ENST00000216774 TNFRSF9Q07011 255 aa11.23□□□□□ -0.61
SRP54-201ENST00000216774 MRPL49Q13405 166 aaKnown RBP11.23□□□□□ -0.61
SRP54-201ENST00000216774 C1orf210Q8IVY1 113 aa11.23□□□□□ -0.61
SRP54-201ENST00000216774 ZNF645Q8N7E2 425 aa11.23□□□□□ -0.61
SRP54-201ENST00000216774 HSPB7Q9UBY9 170 aa11.23□□□□□ -0.61
SRP54-201ENST00000216774 CEBPZOSA8MTT3 80 aa11.22□□□□□ -0.61
SRP54-201ENST00000216774 KLRC4-KLRK1H3BQV0 150 aa11.22□□□□□ -0.61
SRP54-201ENST00000216774 MSMO1Q15800 293 aa11.22□□□□□ -0.61
SRP54-201ENST00000216774 GABRA6Q16445 453 aa11.22□□□□□ -0.61
SRP54-201ENST00000216774 ATP6V1FQ16864 119 aa11.22□□□□□ -0.61
SRP54-201ENST00000216774 DNLZQ5SXM8 178 aa11.22□□□□□ -0.61
SRP54-201ENST00000216774 WDR25Q64LD2 544 aaPredicted RBP11.22□□□□□ -0.61
SRP54-201ENST00000216774 HIST3H2BBQ8N257 126 aa11.22□□□□□ -0.61
SRP54-201ENST00000216774 RBKSQ9H477 322 aa11.22□□□□□ -0.61
SRP54-201ENST00000216774 SMOC1Q9H4F8 434 aa11.22□□□□□ -0.61
SRP54-201ENST00000216774 ZNF407Q9C0G0 2248 aa11.21□□□□□ -0.61
SRP54-201ENST00000216774 UBE2L5PA0A1B0GUS4 154 aa11.21□□□□□ -0.61
SRP54-201ENST00000216774 ZNF729A6NN14 1252 aaPredicted RBP11.21□□□□□ -0.61
SRP54-201ENST00000216774 SMPD2O60906 423 aa11.21□□□□□ -0.61
SRP54-201ENST00000216774 ZNF737O75373 536 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms