RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 GPX4P36969 197 aaPredicted RBP11.12□□□□□ -0.63
CTNS-201ENST00000046640 KIR2DS4P43632 304 aa11.12□□□□□ -0.63
CTNS-201ENST00000046640 KIR2DS1Q14954 304 aa11.12□□□□□ -0.63
CTNS-201ENST00000046640 ELOBQ15370 118 aa11.12□□□□□ -0.63
CTNS-201ENST00000046640 SAXO1Q8IYX7 474 aa11.12□□□□□ -0.63
CTNS-201ENST00000046640 ZNF383Q8NA42 475 aa11.12□□□□□ -0.63
CTNS-201ENST00000046640 PLPPR1Q8TBJ4 325 aa11.12□□□□□ -0.63
CTNS-201ENST00000046640 SLC25A31Q9H0C2 315 aa11.12□□□□□ -0.63
CTNS-201ENST00000046640 VSIRQ9H7M9 311 aa11.12□□□□□ -0.63
CTNS-201ENST00000046640 ZDHHC11Q9H8X9 412 aa11.12□□□□□ -0.63
CTNS-201ENST00000046640 PLSCR2Q9NRY7 297 aa11.12□□□□□ -0.63
CTNS-201ENST00000046640 LYRM2Q9NU23 88 aaPredicted RBP11.12□□□□□ -0.63
CTNS-201ENST00000046640 TRAPPC2LQ9UL33 140 aa11.12□□□□□ -0.63
CTNS-201ENST00000046640 DMRT1Q9Y5R6 373 aa11.12□□□□□ -0.63
CTNS-201ENST00000046640 SMPD2O60906 423 aa11.12□□□□□ -0.63
CTNS-201ENST00000046640 PITX3O75364 302 aa11.12□□□□□ -0.63
CTNS-201ENST00000046640 PGLYRP1O75594 196 aaPredicted RBP11.12□□□□□ -0.63
CTNS-201ENST00000046640 MPV17P39210 176 aa11.12□□□□□ -0.63
CTNS-201ENST00000046640 FOXF2Q12947 444 aa11.12□□□□□ -0.63
CTNS-201ENST00000046640 CLEC12BQ2HXU8 276 aa11.12□□□□□ -0.63
CTNS-201ENST00000046640 RHOVQ96L33 236 aa11.12□□□□□ -0.63
CTNS-201ENST00000046640 NIPSNAP3BQ9BS92 247 aa11.12□□□□□ -0.63
CTNS-201ENST00000046640 GPR61Q9BZJ8 451 aa11.12□□□□□ -0.63
CTNS-201ENST00000046640 OBP2BQ9NPH6 170 aa11.12□□□□□ -0.63
CTNS-201ENST00000046640 UFSP2Q9NUQ7 469 aa11.12□□□□□ -0.63
CTNS-201ENST00000046640 AKAP13Q12802 2813 aa11.11□□□□□ -0.63
CTNS-201ENST00000046640 FAM90A10PA6NDY2 464 aa11.11□□□□□ -0.63
CTNS-201ENST00000046640 FAM90A18PA6NE21 464 aa11.11□□□□□ -0.63
CTNS-201ENST00000046640 FAM90A16PA6NEW6 464 aa11.11□□□□□ -0.63
CTNS-201ENST00000046640 FAM90A20PA6NIJ5 464 aa11.11□□□□□ -0.63
CTNS-201ENST00000046640 FAM90A8PA6NJQ4 464 aa11.11□□□□□ -0.63
CTNS-201ENST00000046640 FAM90A7PA6NKC0 464 aa11.11□□□□□ -0.63
CTNS-201ENST00000046640 FAM90A22PA8MWA6 464 aa11.11□□□□□ -0.63
CTNS-201ENST00000046640 FAM90A12PA8MX19 464 aa11.11□□□□□ -0.63
CTNS-201ENST00000046640 FAM90A5PA8MXJ8 464 aa11.11□□□□□ -0.63
CTNS-201ENST00000046640 FAM90A23PA8MXZ1 464 aa11.11□□□□□ -0.63
CTNS-201ENST00000046640 WNT9BO14905 357 aa11.11□□□□□ -0.63
CTNS-201ENST00000046640 HMGB3O15347 200 aaKnown RBP11.11□□□□□ -0.63
CTNS-201ENST00000046640 NXPH2O95156 264 aa11.11□□□□□ -0.63
CTNS-201ENST00000046640 CNOT4O95628 575 aaKnown RBP11.11□□□□□ -0.63
CTNS-201ENST00000046640 OR2H2O95918 312 aa11.11□□□□□ -0.63
CTNS-201ENST00000046640 FAM90A15PP0C7V4 464 aa11.11□□□□□ -0.63
CTNS-201ENST00000046640 FAM90A13PP0C7W8 464 aa11.11□□□□□ -0.63
CTNS-201ENST00000046640 FAM90A14PP0C7W9 464 aa11.11□□□□□ -0.63
CTNS-201ENST00000046640 FAM90A24PP0C7X0 464 aa11.11□□□□□ -0.63
CTNS-201ENST00000046640 RNF224P0DH78 156 aa11.11□□□□□ -0.63
CTNS-201ENST00000046640 PSG7Q13046 419 aa11.11□□□□□ -0.63
CTNS-201ENST00000046640 DEFB109BQ30KR1 87 aa11.11□□□□□ -0.63
CTNS-201ENST00000046640 KCNS2Q9ULS6 477 aa11.11□□□□□ -0.63
CTNS-201ENST00000046640 OR5B21A6NL26 309 aa11.11□□□□□ -0.63
CTNS-201ENST00000046640 CDS2O95674 445 aa11.11□□□□□ -0.63
CTNS-201ENST00000046640 PSG2P11465 335 aa11.11□□□□□ -0.63
CTNS-201ENST00000046640 FABP6P51161 128 aa11.11□□□□□ -0.63
CTNS-201ENST00000046640 GP6Q9HCN6 339 aa11.11□□□□□ -0.63
CTNS-201ENST00000046640 RYDENQ9NUL5 291 aaKnown RBP11.11□□□□□ -0.63
CTNS-201ENST00000046640 INTS1Q8N201 2190 aaKnown RBP11.11□□□□□ -0.63
CTNS-201ENST00000046640 LMO1P25800 156 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 DEFA6Q01524 100 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 IL24Q13007 206 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 ZNF610Q8N9Z0 462 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 TVP23CQ96ET8 276 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 GMPPAQ96IJ6 420 aaPredicted RBP11.1□□□□□ -0.63
CTNS-201ENST00000046640 ZNF665Q9H7R5 613 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 RNF150Q9ULK6 438 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 SMG1Q96Q15 3661 aaKnown RBP11.1□□□□□ -0.63
CTNS-201ENST00000046640 HEATR1Q9H583 2144 aaKnown RBP11.1□□□□□ -0.63
CTNS-201ENST00000046640 ATMQ13315 3056 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 WDR1O75083 606 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 METTL15P1P0C7V9 234 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 HOXA5P20719 270 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 PMELP40967 661 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 RPS16P62249 146 aaKnown RBP11.1□□□□□ -0.63
CTNS-201ENST00000046640 SPIN2AQ99865 258 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 SPIN2BQ9BPZ2 258 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 RTL8AQ9BWD3 113 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 MSL2Q9HCI7 577 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 TREM2Q9NZC2 230 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 J3QT63 122 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 HIST1H2BKO60814 126 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 TUSC2O75896 110 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 HIST1H2BJP06899 126 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 MMP9P14780 707 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 HIST1H2BOP23527 126 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 HIST1H2BBP33778 126 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 HIST1H2BDP58876 126 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 HIST1H2BCP62807 126 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 TGFBR3Q03167 851 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 HIST2H2BEQ16778 126 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.1□□□□□ -0.63
CTNS-201ENST00000046640 Q6P435 159 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 ZNF880Q6PDB4 577 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 TPRX1Q8N7U7 411 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 C9orf106Q8NAJ2 232 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 HIST1H2BHQ93079 126 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 HIST1H2BNQ99877 126 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 HIST1H2BMQ99879 126 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 C11orf1Q9H5F2 150 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 GAR1Q9NY12 217 aaKnown RBP11.1□□□□□ -0.63
CTNS-201ENST00000046640 KIAA1456Q9P272 454 aa11.1□□□□□ -0.63
CTNS-201ENST00000046640 OR2W1Q9Y3N9 320 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms