RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Igkv14-100A0A0G2JG36 117 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 1700084M14RikB1AT01 78 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Olfr914E9PW59 316 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Prdm13E9PZZ1 754 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Vmn2r66K7N6R9 851 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Gm8857L7N291 182 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Amy1P00687 511 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 P01655 112 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Hspb1P14602 209 aaKnown RBP13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 B3gat2P59270 324 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Rab3cP62823 227 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Pip5k1aP70182 546 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 ArhgdibQ61599 200 aaKnown RBP13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Zfp819Q80V81 607 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Zpld1Q8BGZ8 415 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Scgb2b27Q8R1E9 112 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 GcaQ8VC88 220 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 CdiptQ8VDP6 213 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Cst6Q9D1B1 149 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Wbp2nlQ9D529 359 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Q9DAE8 263 aa13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 SncgQ9Z0F7 123 aaKnown RBP13.67□□□□□ -0.22
Trim39-203ENSMUST00000113706 Awat1A2ADU9 328 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Zfp942B8JJA7 486 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 9130019O22RikG3X941 543 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Olfr1564K7N6V7 318 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Utf1Q6J1H4 339 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Olfr1111Q7TR55 312 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Mfsd9Q8C0T7 466 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Atxn7l3A2AWT3 347 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Wnt5aP22725 380 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Olfr125Q14AJ9 320 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Cd55bQ61476 407 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Olfr1283Q7TQY4 305 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Map6Q7TSJ2 906 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Aig1Q9D8B1 262 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Ackr1Q9QUI6 334 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Tbl1xQ9QXE7 527 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Mmp24Q9R0S2 618 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Igkv6-15A0A140T8M5 115 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Gm34653A0A1L1SR01 368 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Tmsb15aA2AEH9 79 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Tmem185aA2AF53 350 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Gm21833J3QPK1 500 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Irf2P23906 349 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Esp1Q3LHH8 102 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Cbx5Q61686 191 aaKnown RBP13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Olfr1211Q7TR09 311 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Lrrtm1Q8K377 522 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Olfr995Q8VF74 315 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Olfr1239Q8VGM8 305 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Taf9Q8VI33 264 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Ufsp2Q99K23 461 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Atg12Q9CQY1 141 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Il36bQ9D6Z6 183 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 IckQ9JKV2 629 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Lhx6Q9R1R0 363 aa13.66□□□□□ -0.22
Trim39-203ENSMUST00000113706 Ighv5-15A0A0A6YWC7 117 aa13.65□□□□□ -0.22
Trim39-203ENSMUST00000113706 Ube2dnl2A2AFH2 155 aa13.65□□□□□ -0.22
Trim39-203ENSMUST00000113706 Gm21970F6XX07 295 aa13.65□□□□□ -0.22
Trim39-203ENSMUST00000113706 LepP41160 167 aa13.65□□□□□ -0.22
Trim39-203ENSMUST00000113706 Vmn1r223Q5SSA0 361 aa13.65□□□□□ -0.22
Trim39-203ENSMUST00000113706 Fam214bQ8BR27 538 aa13.65□□□□□ -0.22
Trim39-203ENSMUST00000113706 Q8C4X7 151 aa13.65□□□□□ -0.22
Trim39-203ENSMUST00000113706 Vmn1r233Q8R294 319 aa13.65□□□□□ -0.22
Trim39-203ENSMUST00000113706 Egln1Q91YE3 400 aa13.65□□□□□ -0.22
Trim39-203ENSMUST00000113706 Tmprss2Q9JIQ8 490 aa13.65□□□□□ -0.22
Trim39-203ENSMUST00000113706 Cx3cr1Q9Z0D9 354 aa13.65□□□□□ -0.22
Trim39-203ENSMUST00000113706 Lrrc29A0A1B0GQY9 621 aa13.65□□□□□ -0.22
Trim39-203ENSMUST00000113706 Mettl11bB2RXM4 283 aa13.65□□□□□ -0.22
Trim39-203ENSMUST00000113706 Rps2P25444 293 aaKnown RBP13.65□□□□□ -0.22
Trim39-203ENSMUST00000113706 Hist1h1dP43277 221 aaKnown RBP13.65□□□□□ -0.22
Trim39-203ENSMUST00000113706 Stk17bQ8BG48 372 aa13.65□□□□□ -0.22
Trim39-203ENSMUST00000113706 Rcc1Q8VE37 421 aa13.65□□□□□ -0.22
Trim39-203ENSMUST00000113706 Icam4Q9ERM2 262 aa13.65□□□□□ -0.22
Trim39-203ENSMUST00000113706 Igkv19-93A0A0G2JFZ3 115 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Vmn1r138D3YTY2 306 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Sult2a3D3Z1W5 285 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Gm8693E9PW18 306 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Gm4498K9J7G4 306 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Vmn1r118L7N273 306 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Phlda2O08969 144 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Wsb1O54927 421 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Il5P04401 133 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Pax2P32114 414 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 InmtP40936 264 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Tex30Q3TUU5 225 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Cnep1r1Q3UJ81 125 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Tssk5Q8C1R0 372 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Il34Q8R1R4 235 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Ms4a4dQ99N05 225 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Dkk1O54908 272 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 H2-DMaP28078 261 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Cxcl5P50228 132 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 G6pc3Q6NSQ9 346 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Esco2Q8CIB9 592 aaKnown RBP13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Elp5Q99L85 300 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Elp4Q9ER73 422 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Sema7aQ9QUR8 664 aa13.64□□□□□ -0.23
Trim39-203ENSMUST00000113706 Trbv15A0A0A6YYE3 115 aa13.64□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 40.4 ms