RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 USF1P22415 310 aaPredicted RBP5.34□□□□□ -1.56
RTTN-215ENST00000639487 OR1E2P47887 323 aa5.34□□□□□ -1.56
RTTN-215ENST00000639487 NANOS3P60323 173 aaKnown RBP5.34□□□□□ -1.56
RTTN-215ENST00000639487 ZNF616Q08AN1 781 aa5.34□□□□□ -1.56
RTTN-215ENST00000639487 SLC25A48Q6ZT89 311 aaKnown RBP5.34□□□□□ -1.56
RTTN-215ENST00000639487 LAX1Q8IWV1 398 aa5.34□□□□□ -1.56
RTTN-215ENST00000639487 PAQR4Q8N4S7 273 aaPredicted RBP5.34□□□□□ -1.56
RTTN-215ENST00000639487 OR10W1Q8NGF6 305 aa5.34□□□□□ -1.56
RTTN-215ENST00000639487 OR10K1Q8NGX5 313 aa5.34□□□□□ -1.56
RTTN-215ENST00000639487 HEXA-AS1Q9H8Q6 139 aa5.34□□□□□ -1.56
RTTN-215ENST00000639487 RNF121Q9H920 327 aa5.34□□□□□ -1.56
RTTN-215ENST00000639487 YAE1D1Q9NRH1 226 aa5.34□□□□□ -1.56
RTTN-215ENST00000639487 OR6C3Q9NZP0 311 aa5.34□□□□□ -1.56
RTTN-215ENST00000639487 ADAM18Q9Y3Q7 739 aa5.34□□□□□ -1.56
RTTN-215ENST00000639487 PRR14LQ5THK1 2151 aa5.34□□□□□ -1.56
RTTN-215ENST00000639487 DNAH7Q8WXX0 4024 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 TRAPPC6AO75865 159 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 METTL15P1P0C7V9 234 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 CD80P33681 288 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 LOXL3P58215 753 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 ZNF79Q15937 498 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 NKPD1Q17RQ9 610 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 MRPL21Q7Z2W9 205 aaKnown RBP5.33□□□□□ -1.56
RTTN-215ENST00000639487 WDR53Q7Z5U6 358 aaPredicted RBP5.33□□□□□ -1.56
RTTN-215ENST00000639487 GDPD1Q8N9F7 314 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 OR9Q1Q8NGQ5 310 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 OR13C5Q8NGS8 318 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 GEMIN7Q9H840 131 aaKnown RBP5.33□□□□□ -1.56
RTTN-215ENST00000639487 GSTK1Q9Y2Q3 226 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 C5orf42Q9H799 3197 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 TRAV26-1A0A087WT03 109 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 A0A1B0GVI7 797 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 OPN1SWP03999 348 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 AKR1C3P42330 323 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 OR3A1P47881 315 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 ARF6P62330 175 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 RPL19P84098 196 aaKnown RBP5.33□□□□□ -1.56
RTTN-215ENST00000639487 GAMTQ14353 236 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 SPHARQ15513 63 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 ATP6V1FQ16864 119 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 SPATA46Q5T0L3 261 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 ZNF66Q6ZN08 573 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 SSX7Q7RTT5 188 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 CCDC190Q86UF4 302 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 HOGA1Q86XE5 327 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 OR10Q1Q8NGQ4 319 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 OR4K13Q8NH42 304 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 OR5AK2Q8NH90 309 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 KCNG3Q8TAE7 436 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 ZNF431Q8TF32 576 aaPredicted RBP5.33□□□□□ -1.56
RTTN-215ENST00000639487 PGAM5Q96HS1 289 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 CCDC32Q9BV29 185 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 SNHG12Q9BXW3 62 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 CLEC4MQ9H2X3 399 aaPredicted RBP5.33□□□□□ -1.56
RTTN-215ENST00000639487 SLC45A2Q9UMX9 530 aa5.33□□□□□ -1.56
RTTN-215ENST00000639487 RBM7Q9Y580 266 aaKnown RBP5.33□□□□□ -1.56
RTTN-215ENST00000639487 IGKV1-27A0A075B6S5 117 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 TRBV6-7A0A0A0MS04 114 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 LOC100289279A0A1B0GTE1 492 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 LILRA1O75019 489 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 H2BFMP0C1H6 154 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 FABP6P51161 128 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 PTTG1IPP53801 180 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 MFGE8Q08431 387 aaPredicted RBP5.32□□□□□ -1.56
RTTN-215ENST00000639487 FAM27E3Q08E93 113 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 SNAI3Q3KNW1 292 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 GON4LQ3T8J9 2241 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 ANGPTL5Q86XS5 388 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 Q8N7P7 452 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 TMEM229BQ8NBD8 167 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 OR6N1Q8NGY5 312 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 RNF125Q96EQ8 232 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 HYLS1Q96M11 299 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 DNAJC4Q9NNZ3 241 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 KIF25Q9UIL4 384 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 USP34Q70CQ2 3546 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 GTF3C1Q12789 2109 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 A6NDX4 124 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 SIVA1O15304 175 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 XRCC3O43542 346 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 NCR1O76036 304 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 RGS11O94810 467 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 RPLP1P05386 114 aaKnown RBP5.32□□□□□ -1.56
RTTN-215ENST00000639487 PRDX4Q13162 271 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 TMEM249Q2WGJ8 235 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 TMEM177Q53S58 311 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 TMEM144Q7Z5S9 345 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 EIF4E3Q8N5X7 224 aaKnown RBP5.32□□□□□ -1.56
RTTN-215ENST00000639487 OTULINQ96BN8 352 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 RAB3CQ96E17 227 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 ZNF837Q96EG3 531 aaPredicted RBP5.32□□□□□ -1.56
RTTN-215ENST00000639487 C18orf12Q96KH6 178 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 HARBI1Q96MB7 349 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 TSSK2Q96PF2 358 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 ALKBH7Q9BT30 221 aaPredicted RBP5.32□□□□□ -1.56
RTTN-215ENST00000639487 RSRP1Q9BUV0 290 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 GPR173Q9NS66 373 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 CISD1Q9NZ45 108 aaKnown RBP5.32□□□□□ -1.56
RTTN-215ENST00000639487 ZNF319Q9P2F9 582 aa5.32□□□□□ -1.56
RTTN-215ENST00000639487 NLKQ9UBE8 527 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms