RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 WI2-2373I1.2A0A1W2PRP0 233 aa15.8■□□□□ 0.12
CLN6-222ENST00000637667 UBE2QL1A1L167 161 aa15.8■□□□□ 0.12
CLN6-222ENST00000637667 OGFRL1Q5TC84 451 aaPredicted RBP15.8■□□□□ 0.12
CLN6-222ENST00000637667 STEAP3Q658P3 488 aa15.8■□□□□ 0.12
CLN6-222ENST00000637667 TEX38Q6PEX7 206 aa15.8■□□□□ 0.12
CLN6-222ENST00000637667 ZNF695Q8IW36 515 aa15.8■□□□□ 0.12
CLN6-222ENST00000637667 NANOGP1Q8N7R0 232 aa15.8■□□□□ 0.12
CLN6-222ENST00000637667 OR8H1Q8NGG4 311 aa15.8■□□□□ 0.12
CLN6-222ENST00000637667 TFAP2CQ92754 450 aa15.8■□□□□ 0.12
CLN6-222ENST00000637667 DPF1Q92782 380 aa15.8■□□□□ 0.12
CLN6-222ENST00000637667 CYYR1Q96J86 154 aa15.8■□□□□ 0.12
CLN6-222ENST00000637667 P2RX4Q99571 388 aa15.8■□□□□ 0.12
CLN6-222ENST00000637667 RASL11BQ9BPW5 248 aa15.8■□□□□ 0.12
CLN6-222ENST00000637667 MCRIP2Q9BUT9 160 aaKnown RBP15.8■□□□□ 0.12
CLN6-222ENST00000637667 TAF9BQ9HBM6 251 aa15.8■□□□□ 0.12
CLN6-222ENST00000637667 FKBP14Q9NWM8 211 aa15.8■□□□□ 0.12
CLN6-222ENST00000637667 ERGIC3Q9Y282 383 aa15.8■□□□□ 0.12
CLN6-222ENST00000637667 PDCD6O75340 191 aa15.79■□□□□ 0.12
CLN6-222ENST00000637667 PNLIPRP3Q17RR3 467 aa15.79■□□□□ 0.12
CLN6-222ENST00000637667 FAM46BQ96A09 425 aa15.79■□□□□ 0.12
CLN6-222ENST00000637667 GON7Q9BXV9 100 aa15.79■□□□□ 0.12
CLN6-222ENST00000637667 OR2S2Q9NQN1 319 aa15.79■□□□□ 0.12
CLN6-222ENST00000637667 MBNL3Q9NUK0 354 aaKnown RBP15.79■□□□□ 0.12
CLN6-222ENST00000637667 KCNIP1Q9NZI2 227 aa15.79■□□□□ 0.12
CLN6-222ENST00000637667 GHRLQ9UBU3 117 aa15.79■□□□□ 0.12
CLN6-222ENST00000637667 CASQ2O14958 399 aaPredicted RBP15.78■□□□□ 0.12
CLN6-222ENST00000637667 LANCL1O43813 399 aa15.78■□□□□ 0.12
CLN6-222ENST00000637667 GPR50Q13585 617 aa15.78■□□□□ 0.12
CLN6-222ENST00000637667 INSL4Q14641 139 aa15.78■□□□□ 0.12
CLN6-222ENST00000637667 ZNF554Q86TJ5 538 aa15.78■□□□□ 0.12
CLN6-222ENST00000637667 FAM71E2Q8N5Q1 922 aa15.78■□□□□ 0.12
CLN6-222ENST00000637667 RBMXL1Q96E39 390 aaKnown RBP15.78■□□□□ 0.12
CLN6-222ENST00000637667 CST11Q9H112 138 aa15.78■□□□□ 0.12
CLN6-222ENST00000637667 RRP9O43818 475 aaKnown RBP15.77■□□□□ 0.12
CLN6-222ENST00000637667 RPLP1P05386 114 aaKnown RBP15.77■□□□□ 0.12
CLN6-222ENST00000637667 F2RL1P55085 397 aa15.77■□□□□ 0.12
CLN6-222ENST00000637667 LSAMPQ13449 338 aa15.77■□□□□ 0.12
CLN6-222ENST00000637667 FOXE3Q13461 319 aa15.77■□□□□ 0.12
CLN6-222ENST00000637667 GNMTQ14749 295 aa15.77■□□□□ 0.12
CLN6-222ENST00000637667 MORN2Q502X0 79 aa15.77■□□□□ 0.12
CLN6-222ENST00000637667 ACSM3Q53FZ2 586 aa15.77■□□□□ 0.12
CLN6-222ENST00000637667 DEFB121Q5J5C9 76 aa15.77■□□□□ 0.12
CLN6-222ENST00000637667 CXorf66Q5JRM2 361 aaPredicted RBP15.77■□□□□ 0.12
CLN6-222ENST00000637667 UNQ9370/PRO34162Q6UXP9 181 aa15.77■□□□□ 0.12
CLN6-222ENST00000637667 OR52L2PQ8NGH6 319 aa15.77■□□□□ 0.12
CLN6-222ENST00000637667 MRPL30Q8TCC3 161 aaKnown RBP15.77■□□□□ 0.12
CLN6-222ENST00000637667 RAX2Q96IS3 184 aa15.77■□□□□ 0.12
CLN6-222ENST00000637667 DUX3Q96PT4 197 aa15.77■□□□□ 0.12
CLN6-222ENST00000637667 HSPB9Q9BQS6 159 aa15.77■□□□□ 0.12
CLN6-222ENST00000637667 CCL24O00175 119 aa15.76■□□□□ 0.11
CLN6-222ENST00000637667 UBBP0CG47 229 aa15.76■□□□□ 0.11
CLN6-222ENST00000637667 SOX6P35712 828 aa15.76■□□□□ 0.11
CLN6-222ENST00000637667 PPP1CCP36873 323 aaKnown RBP15.76■□□□□ 0.11
CLN6-222ENST00000637667 GP2P55259 537 aaKnown RBP15.76■□□□□ 0.11
CLN6-222ENST00000637667 GABPB1Q06547 395 aaPredicted RBP15.76■□□□□ 0.11
CLN6-222ENST00000637667 NKAPLQ5M9Q1 402 aa15.76■□□□□ 0.11
CLN6-222ENST00000637667 C6orf141Q5SZD1 244 aa15.76■□□□□ 0.11
CLN6-222ENST00000637667 FAM27D1Q5T7N8 215 aa15.76■□□□□ 0.11
CLN6-222ENST00000637667 LCNL1Q6ZST4 164 aa15.76■□□□□ 0.11
CLN6-222ENST00000637667 C5orf24Q7Z6I8 188 aa15.76■□□□□ 0.11
CLN6-222ENST00000637667 MS4A15Q8N5U1 240 aa15.76■□□□□ 0.11
CLN6-222ENST00000637667 RNF152Q8N8N0 203 aa15.76■□□□□ 0.11
CLN6-222ENST00000637667 ABHD14AQ9BUJ0 271 aa15.76■□□□□ 0.11
CLN6-222ENST00000637667 DCLRE1BQ9H816 532 aa15.76■□□□□ 0.11
CLN6-222ENST00000637667 JPT1Q9UK76 154 aa15.76■□□□□ 0.11
CLN6-222ENST00000637667 H0YHG0 523 aa15.75■□□□□ 0.11
CLN6-222ENST00000637667 CDK1P06493 297 aa15.75■□□□□ 0.11
CLN6-222ENST00000637667 ELANEP08246 267 aa15.75■□□□□ 0.11
CLN6-222ENST00000637667 CHATP28329 748 aa15.75■□□□□ 0.11
CLN6-222ENST00000637667 HTD2P86397 168 aa15.75■□□□□ 0.11
CLN6-222ENST00000637667 RNLSQ5VYX0 342 aa15.75■□□□□ 0.11
CLN6-222ENST00000637667 LRRTM1Q86UE6 522 aa15.75■□□□□ 0.11
CLN6-222ENST00000637667 NEDD4LQ96PU5 975 aa15.75■□□□□ 0.11
CLN6-222ENST00000637667 MND1Q9BWT6 205 aa15.75■□□□□ 0.11
CLN6-222ENST00000637667 VCXQ9H320 206 aa15.75■□□□□ 0.11
CLN6-222ENST00000637667 VSIG8P0DPA2 414 aa15.74■□□□□ 0.11
CLN6-222ENST00000637667 VDAC1P21796 283 aa15.74■□□□□ 0.11
CLN6-222ENST00000637667 CDX1P47902 265 aaPredicted RBP15.74■□□□□ 0.11
CLN6-222ENST00000637667 CFHR3Q02985 330 aa15.74■□□□□ 0.11
CLN6-222ENST00000637667 MMDQ15546 238 aa15.74■□□□□ 0.11
CLN6-222ENST00000637667 C1orf100Q5SVJ3 147 aa15.74■□□□□ 0.11
CLN6-222ENST00000637667 GLT8D1Q68CQ7 371 aa15.74■□□□□ 0.11
CLN6-222ENST00000637667 OR10K2Q6IF99 312 aa15.74■□□□□ 0.11
CLN6-222ENST00000637667 PHYHIPQ92561 330 aa15.74■□□□□ 0.11
CLN6-222ENST00000637667 SULT4A1Q9BR01 284 aa15.74■□□□□ 0.11
CLN6-222ENST00000637667 TMED9Q9BVK6 235 aa15.74■□□□□ 0.11
CLN6-222ENST00000637667 MRPL20Q9BYC9 149 aaKnown RBP15.74■□□□□ 0.11
CLN6-222ENST00000637667 ZNF580Q9UK33 172 aa15.74■□□□□ 0.11
CLN6-222ENST00000637667 PTGES3LE9PB15 166 aa15.73■□□□□ 0.11
CLN6-222ENST00000637667 YPEL1O60688 119 aa15.73■□□□□ 0.11
CLN6-222ENST00000637667 RGS11O94810 467 aa15.73■□□□□ 0.11
CLN6-222ENST00000637667 IGHG4P01861 327 aa15.73■□□□□ 0.11
CLN6-222ENST00000637667 IGF1P05019 195 aa15.73■□□□□ 0.11
CLN6-222ENST00000637667 SLC2A2P11168 524 aaPredicted RBP15.73■□□□□ 0.11
CLN6-222ENST00000637667 RAB25P57735 213 aa15.73■□□□□ 0.11
CLN6-222ENST00000637667 RPS27AP62979 156 aaKnown RBP15.73■□□□□ 0.11
CLN6-222ENST00000637667 KIR2DS1Q14954 304 aa15.73■□□□□ 0.11
CLN6-222ENST00000637667 DEFB136Q30KP8 78 aa15.73■□□□□ 0.11
CLN6-222ENST00000637667 RBM48Q5RL73 367 aaKnown RBP15.73■□□□□ 0.11
CLN6-222ENST00000637667 ODF3L1Q8IXM7 274 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms