RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 VGLL3A8MV65 326 aa12.47□□□□□ -0.41
SNRNP48-203ENST00000634363 NPIPB11E5RHQ5 1161 aa12.47□□□□□ -0.41
SNRNP48-203ENST00000634363 TOR1AO14656 332 aa12.47□□□□□ -0.41
SNRNP48-203ENST00000634363 SOCS1O15524 211 aa12.47□□□□□ -0.41
SNRNP48-203ENST00000634363 SPINT2O43291 252 aa12.47□□□□□ -0.41
SNRNP48-203ENST00000634363 ORC5O43913 435 aa12.47□□□□□ -0.41
SNRNP48-203ENST00000634363 CGB3P0DN86 165 aa12.47□□□□□ -0.41
SNRNP48-203ENST00000634363 CGB7P0DN87 165 aa12.47□□□□□ -0.41
SNRNP48-203ENST00000634363 CD34P28906 385 aa12.47□□□□□ -0.41
SNRNP48-203ENST00000634363 GDNFP39905 211 aa12.47□□□□□ -0.41
SNRNP48-203ENST00000634363 LSM3P62310 102 aaKnown RBP12.47□□□□□ -0.41
SNRNP48-203ENST00000634363 DEFB121Q5J5C9 76 aa12.47□□□□□ -0.41
SNRNP48-203ENST00000634363 GAPTQ8N292 157 aa12.47□□□□□ -0.41
SNRNP48-203ENST00000634363 FAM89BQ8N5H3 189 aa12.47□□□□□ -0.41
SNRNP48-203ENST00000634363 OR10A7Q8NGE5 316 aa12.47□□□□□ -0.41
SNRNP48-203ENST00000634363 OR13F1Q8NGS4 319 aa12.47□□□□□ -0.41
SNRNP48-203ENST00000634363 RFESDQ8TAC1 157 aa12.47□□□□□ -0.41
SNRNP48-203ENST00000634363 ARL11Q969Q4 196 aa12.47□□□□□ -0.41
SNRNP48-203ENST00000634363 FAAP24Q9BTP7 215 aa12.47□□□□□ -0.41
SNRNP48-203ENST00000634363 FUNDC2Q9BWH2 189 aa12.47□□□□□ -0.41
SNRNP48-203ENST00000634363 LINC00574Q9H8X3 128 aa12.47□□□□□ -0.41
SNRNP48-203ENST00000634363 CHMP1AQ9HD42 196 aaPredicted RBP12.47□□□□□ -0.41
SNRNP48-203ENST00000634363 KCNIP1Q9NZI2 227 aa12.47□□□□□ -0.41
SNRNP48-203ENST00000634363 HILPDAQ9Y5L2 63 aa12.47□□□□□ -0.41
SNRNP48-203ENST00000634363 A0A087X0M5 115 aa12.46□□□□□ -0.41
SNRNP48-203ENST00000634363 A0A1B0GX30 115 aa12.46□□□□□ -0.41
SNRNP48-203ENST00000634363 METTL21EPA6NDL7 271 aa12.46□□□□□ -0.41
SNRNP48-203ENST00000634363 CLEC2LP0C7M8 214 aa12.46□□□□□ -0.41
SNRNP48-203ENST00000634363 HTR1DP28221 377 aa12.46□□□□□ -0.41
SNRNP48-203ENST00000634363 VDAC2P45880 294 aaPredicted RBP12.46□□□□□ -0.41
SNRNP48-203ENST00000634363 TMEM95Q3KNT9 176 aa12.46□□□□□ -0.41
SNRNP48-203ENST00000634363 VAX1Q5SQQ9 334 aa12.46□□□□□ -0.41
SNRNP48-203ENST00000634363 MINOS1Q5TGZ0 78 aa12.46□□□□□ -0.41
SNRNP48-203ENST00000634363 BAIAP2L2Q6UXY1 529 aa12.46□□□□□ -0.41
SNRNP48-203ENST00000634363 PRR18Q8N4B5 295 aa12.46□□□□□ -0.41
SNRNP48-203ENST00000634363 OR5AU1Q8NGC0 362 aa12.46□□□□□ -0.41
SNRNP48-203ENST00000634363 PTX4Q96A99 478 aa12.46□□□□□ -0.41
SNRNP48-203ENST00000634363 ZNF286AQ9HBT8 521 aa12.46□□□□□ -0.41
SNRNP48-203ENST00000634363 HSF4Q9ULV5 492 aa12.46□□□□□ -0.41
SNRNP48-203ENST00000634363 MINOS1-NBL1R4GNA1 71 aa12.46□□□□□ -0.41
SNRNP48-203ENST00000634363 F2RL2O00254 374 aa12.45□□□□□ -0.42
SNRNP48-203ENST00000634363 SDCBPO00560 298 aaPredicted RBP12.45□□□□□ -0.42
SNRNP48-203ENST00000634363 PF4V1P10720 104 aa12.45□□□□□ -0.42
SNRNP48-203ENST00000634363 PRRX1P54821 245 aa12.45□□□□□ -0.42
SNRNP48-203ENST00000634363 MRPS15P82914 257 aaKnown RBP12.45□□□□□ -0.42
SNRNP48-203ENST00000634363 PLA2G7Q13093 441 aa12.45□□□□□ -0.42
SNRNP48-203ENST00000634363 TMEM30BQ3MIR4 351 aa12.45□□□□□ -0.42
SNRNP48-203ENST00000634363 LDLRAD2Q5SZI1 272 aa12.45□□□□□ -0.42
SNRNP48-203ENST00000634363 IDNKQ5T6J7 187 aa12.45□□□□□ -0.42
SNRNP48-203ENST00000634363 CROCCP3Q8IVE0 287 aa12.45□□□□□ -0.42
SNRNP48-203ENST00000634363 OR9G1Q8NH87 305 aa12.45□□□□□ -0.42
SNRNP48-203ENST00000634363 UBALD1Q8TB05 177 aa12.45□□□□□ -0.42
SNRNP48-203ENST00000634363 MRPL30Q8TCC3 161 aaKnown RBP12.45□□□□□ -0.42
SNRNP48-203ENST00000634363 LGALS14Q8TCE9 139 aa12.45□□□□□ -0.42
SNRNP48-203ENST00000634363 CREB3L1Q96BA8 519 aa12.45□□□□□ -0.42
SNRNP48-203ENST00000634363 RAB3CQ96E17 227 aa12.45□□□□□ -0.42
SNRNP48-203ENST00000634363 ARHGAP5-AS1Q96IT6 56 aa12.45□□□□□ -0.42
SNRNP48-203ENST00000634363 WNT10AQ9GZT5 417 aa12.45□□□□□ -0.42
SNRNP48-203ENST00000634363 ATG5Q9H1Y0 275 aa12.45□□□□□ -0.42
SNRNP48-203ENST00000634363 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.45□□□□□ -0.42
SNRNP48-203ENST00000634363 AMMECR1Q9Y4X0 333 aaPredicted RBP12.45□□□□□ -0.42
SNRNP48-203ENST00000634363 FOXI3A8MTJ6 420 aaPredicted RBP12.44□□□□□ -0.42
SNRNP48-203ENST00000634363 C12orf77C9JDV5 145 aa12.44□□□□□ -0.42
SNRNP48-203ENST00000634363 C15orf65H3BRN8 121 aa12.44□□□□□ -0.42
SNRNP48-203ENST00000634363 SNRPBP14678 240 aaKnown RBP12.44□□□□□ -0.42
SNRNP48-203ENST00000634363 RCC1P18754 421 aaPredicted RBP12.44□□□□□ -0.42
SNRNP48-203ENST00000634363 CEACAM3P40198 252 aa12.44□□□□□ -0.42
SNRNP48-203ENST00000634363 GNG10P50151 68 aa12.44□□□□□ -0.42
SNRNP48-203ENST00000634363 HLA-DRB5Q30154 266 aa12.44□□□□□ -0.42
SNRNP48-203ENST00000634363 MOB1BQ7L9L4 216 aa12.44□□□□□ -0.42
SNRNP48-203ENST00000634363 GPR141Q7Z602 305 aa12.44□□□□□ -0.42
SNRNP48-203ENST00000634363 CENPVQ7Z7K6 275 aaPredicted RBP12.44□□□□□ -0.42
SNRNP48-203ENST00000634363 ZNF554Q86TJ5 538 aa12.44□□□□□ -0.42
SNRNP48-203ENST00000634363 OR4P4Q8NGL7 312 aa12.44□□□□□ -0.42
SNRNP48-203ENST00000634363 OR10R2Q8NGX6 335 aa12.44□□□□□ -0.42
SNRNP48-203ENST00000634363 SETD6Q8TBK2 473 aa12.44□□□□□ -0.42
SNRNP48-203ENST00000634363 WIPF2Q8TF74 440 aaPredicted RBP12.44□□□□□ -0.42
SNRNP48-203ENST00000634363 CYYR1Q96J86 154 aa12.44□□□□□ -0.42
SNRNP48-203ENST00000634363 PECRQ9BY49 303 aa12.44□□□□□ -0.42
SNRNP48-203ENST00000634363 RIMS4Q9H426 269 aaPredicted RBP12.44□□□□□ -0.42
SNRNP48-203ENST00000634363 TAF9BQ9HBM6 251 aa12.44□□□□□ -0.42
SNRNP48-203ENST00000634363 C12orf4Q9NQ89 552 aa12.44□□□□□ -0.42
SNRNP48-203ENST00000634363 MBNL3Q9NUK0 354 aaKnown RBP12.44□□□□□ -0.42
SNRNP48-203ENST00000634363 GNG12Q9UBI6 72 aa12.44□□□□□ -0.42
SNRNP48-203ENST00000634363 AK3Q9UIJ7 227 aa12.44□□□□□ -0.42
SNRNP48-203ENST00000634363 LEUTXA8MZ59 168 aa12.43□□□□□ -0.42
SNRNP48-203ENST00000634363 TMEM127O75204 238 aa12.43□□□□□ -0.42
SNRNP48-203ENST00000634363 SCGNO76038 276 aa12.43□□□□□ -0.42
SNRNP48-203ENST00000634363 IGLV1-47P01700 117 aa12.43□□□□□ -0.42
SNRNP48-203ENST00000634363 IGHV3-7P01780 117 aa12.43□□□□□ -0.42
SNRNP48-203ENST00000634363 HBZP02008 142 aa12.43□□□□□ -0.42
SNRNP48-203ENST00000634363 PF4P02776 101 aa12.43□□□□□ -0.42
SNRNP48-203ENST00000634363 TGFBR1P36897 503 aa12.43□□□□□ -0.42
SNRNP48-203ENST00000634363 SERPINB10P48595 397 aa12.43□□□□□ -0.42
SNRNP48-203ENST00000634363 ARHGDIBP52566 201 aa12.43□□□□□ -0.42
SNRNP48-203ENST00000634363 TMEM50BP56557 158 aa12.43□□□□□ -0.42
SNRNP48-203ENST00000634363 SCAND1P57086 179 aa12.43□□□□□ -0.42
SNRNP48-203ENST00000634363 NCS1P62166 190 aa12.43□□□□□ -0.42
SNRNP48-203ENST00000634363 PLAC9Q5JTB6 97 aa12.43□□□□□ -0.42
SNRNP48-203ENST00000634363 SLC16A12Q6ZSM3 486 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms