RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 LPAR5Q9H1C0 372 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 PLEKHA3Q9HB20 300 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 GPR84Q9NQS5 396 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 SPHK2Q9NRA0 654 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 UQCC1Q9NVA1 299 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 C11orf21Q9P2W6 132 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 RNF7Q9UBF6 113 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 CHD9Q3L8U1 2897 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 COL1A1P02452 1464 aaPredicted RBP3.93□□□□□ -1.78
SDCBP-213ENST00000630925 COL4A6Q14031 1691 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 DOCK3Q8IZD9 2030 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 A0A1B0GWB2 263 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 hADV38S2A0JD32 116 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 MYBPHLA2RUH7 354 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 ZNF850A8MQ14 1090 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 ZNF705EA8MWA4 302 aaPredicted RBP3.93□□□□□ -1.78
SDCBP-213ENST00000630925 MMP23AO75900 390 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 PIAS1O75925 651 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 TOMM40O96008 361 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 SELEP16581 610 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 PFN2P35080 140 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 GPM6AP51674 278 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 TAS2R30P59541 319 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 RPS27AP62979 156 aaKnown RBP3.93□□□□□ -1.78
SDCBP-213ENST00000630925 MXD1Q05195 221 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 MEF2CQ06413 473 aaPredicted RBP3.93□□□□□ -1.78
SDCBP-213ENST00000630925 LY6DQ14210 128 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 MORN2Q502X0 79 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 GSG1LQ6UXU4 331 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 FAM57BQ71RH2 274 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 C8orf59Q8N0T1 100 aaPredicted RBP3.93□□□□□ -1.78
SDCBP-213ENST00000630925 ZNF843Q8N446 348 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 BLNKQ8WV28 456 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.93□□□□□ -1.78
SDCBP-213ENST00000630925 OR5P3Q8WZ94 311 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 SLC7A6Q92536 515 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 DCUN1D4Q92564 292 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 RITA1Q96K30 269 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 BBC3Q96PG8 261 aaPredicted RBP3.93□□□□□ -1.78
SDCBP-213ENST00000630925 TP53RKQ96S44 253 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 TMEM222Q9H0R3 208 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 CDC42EP4Q9H3Q1 356 aaKnown RBP3.93□□□□□ -1.78
SDCBP-213ENST00000630925 TMPRSS5Q9H3S3 457 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 MMP26Q9NRE1 261 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 TAAR2Q9P1P5 351 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 SSR3Q9UNL2 185 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 ST3GAL6Q9Y274 331 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 LAMTOR2Q9Y2Q5 125 aa3.93□□□□□ -1.78
SDCBP-213ENST00000630925 YTHDF2Q9Y5A9 579 aaKnown RBP3.93□□□□□ -1.78
SDCBP-213ENST00000630925 MAST2Q6P0Q8 1798 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 PLXNA3P51805 1871 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 CKAP5Q14008 2032 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 ZFHX2Q9C0A1 2572 aaPredicted RBP3.92□□□□□ -1.78
SDCBP-213ENST00000630925 SIGLEC16A6NMB1 481 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 A8MWP6 167 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 COPEO14579 308 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 C6orf47O95873 294 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 EPPINO95925 133 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 CSN2P05814 226 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 RBMY1CP0DJD4 496 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 PSG2P11465 335 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 GGT1P19440 569 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 TNFRSF1BP20333 461 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 CA6P23280 308 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 PRTN3P24158 256 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 MYCNOSP40205 109 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 MARCKSL1P49006 195 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 EMP1P54849 157 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 NSUN5P1Q3KNT7 163 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 HSD17B12Q53GQ0 312 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 TMEM207Q6UWW9 146 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 Q6ZSV7 163 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 TGIF2LYQ8IUE0 185 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 ODF3L1Q8IXM7 274 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 ZCCHC24Q8N2G6 241 aaKnown RBP3.92□□□□□ -1.78
SDCBP-213ENST00000630925 ZNF433Q8N7K0 673 aaPredicted RBP3.92□□□□□ -1.78
SDCBP-213ENST00000630925 OR1L3Q8NH93 324 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 NEIL3Q8TAT5 605 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 MZB1Q8WU39 189 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 C17orf77Q96MU5 243 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 IP6K3Q96PC2 410 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 PITX2Q99697 317 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 SNHG12Q9BXW3 62 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 ULBP3Q9BZM4 244 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 TMEM45AQ9NWC5 275 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 DNAJC27Q9NZQ0 273 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 UBR2Q8IWV8 1755 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 VWA8A3KMH1 1905 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 MYH15Q9Y2K3 1946 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 DENND4AQ7Z401 1863 aa3.92□□□□□ -1.78
SDCBP-213ENST00000630925 MED23Q9ULK4 1368 aa3.91□□□□□ -1.78
SDCBP-213ENST00000630925 TRAV8-4A0A0B4J246 113 aa3.91□□□□□ -1.78
SDCBP-213ENST00000630925 A0A0X1KG70 313 aa3.91□□□□□ -1.78
SDCBP-213ENST00000630925 TEX50A0A1B0GTY4 177 aa3.91□□□□□ -1.78
SDCBP-213ENST00000630925 SMIM31A0A1B0GVY4 71 aa3.91□□□□□ -1.78
SDCBP-213ENST00000630925 A0A1B0GXF2 115 aa3.91□□□□□ -1.78
SDCBP-213ENST00000630925 RBFOX3A6NFN3 312 aa3.91□□□□□ -1.78
SDCBP-213ENST00000630925 OTOL1A6NHN0 477 aaPredicted RBP3.91□□□□□ -1.78
SDCBP-213ENST00000630925 ZNF726A6NNF4 738 aa3.91□□□□□ -1.78
SDCBP-213ENST00000630925 MPTX1A8MV57 137 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms