RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 GPA33Q99795 319 aa12.27□□□□□ -0.45
UBE3A-220ENST00000630424 IGHV3OR16-10A0A075B7F0 116 aa12.26□□□□□ -0.45
UBE3A-220ENST00000630424 MC5RP33032 325 aa12.26□□□□□ -0.45
UBE3A-220ENST00000630424 FOXB2Q5VYV0 432 aa12.26□□□□□ -0.45
UBE3A-220ENST00000630424 LYZL2Q7Z4W2 148 aa12.26□□□□□ -0.45
UBE3A-220ENST00000630424 LURAP1Q96LR2 239 aa12.26□□□□□ -0.45
UBE3A-220ENST00000630424 OR4C12Q96R67 309 aa12.26□□□□□ -0.45
UBE3A-220ENST00000630424 CCL19Q99731 98 aa12.26□□□□□ -0.45
UBE3A-220ENST00000630424 BCORQ6W2J9 1755 aa12.26□□□□□ -0.45
UBE3A-220ENST00000630424 PPIAL4CA0A0B4J2A2 164 aa12.26□□□□□ -0.45
UBE3A-220ENST00000630424 TEX50A0A1B0GTY4 177 aa12.26□□□□□ -0.45
UBE3A-220ENST00000630424 NKX2-6A6NCS4 301 aa12.26□□□□□ -0.45
UBE3A-220ENST00000630424 SYNGR3O43761 229 aa12.26□□□□□ -0.45
UBE3A-220ENST00000630424 TIAF1O95411 115 aa12.26□□□□□ -0.45
UBE3A-220ENST00000630424 P01737 135 aa12.26□□□□□ -0.45
UBE3A-220ENST00000630424 HBZP02008 142 aa12.26□□□□□ -0.45
UBE3A-220ENST00000630424 CTSBP07858 339 aa12.26□□□□□ -0.45
UBE3A-220ENST00000630424 PPIAL4GP0DN37 164 aa12.26□□□□□ -0.45
UBE3A-220ENST00000630424 PDLIM4P50479 330 aa12.26□□□□□ -0.45
UBE3A-220ENST00000630424 OR4A5Q8NH83 315 aa12.26□□□□□ -0.45
UBE3A-220ENST00000630424 ABHD17AQ96GS6 310 aa12.26□□□□□ -0.45
UBE3A-220ENST00000630424 RHOVQ96L33 236 aa12.26□□□□□ -0.45
UBE3A-220ENST00000630424 ASAH2BP0C7U1 165 aa12.26□□□□□ -0.45
UBE3A-220ENST00000630424 KIR2DL2P43627 348 aaPredicted RBP12.26□□□□□ -0.45
UBE3A-220ENST00000630424 PCOLCEQ15113 449 aa12.26□□□□□ -0.45
UBE3A-220ENST00000630424 HCP5Q6MZN7 132 aa12.26□□□□□ -0.45
UBE3A-220ENST00000630424 ZNF561Q8N587 486 aa12.26□□□□□ -0.45
UBE3A-220ENST00000630424 STXBP6Q8NFX7 210 aa12.26□□□□□ -0.45
UBE3A-220ENST00000630424 SLC35B3Q9H1N7 401 aa12.26□□□□□ -0.45
UBE3A-220ENST00000630424 RCC2Q9P258 522 aaKnown RBP12.26□□□□□ -0.45
UBE3A-220ENST00000630424 METTL1Q9UBP6 276 aaKnown RBP12.26□□□□□ -0.45
UBE3A-220ENST00000630424 TO15178 435 aa12.25□□□□□ -0.45
UBE3A-220ENST00000630424 CYB5R3P00387 301 aaPredicted RBP12.25□□□□□ -0.45
UBE3A-220ENST00000630424 HOXB1P14653 301 aaPredicted RBP12.25□□□□□ -0.45
UBE3A-220ENST00000630424 FDX2Q6P4F2 183 aa12.25□□□□□ -0.45
UBE3A-220ENST00000630424 TEPPQ6URK8 271 aa12.25□□□□□ -0.45
UBE3A-220ENST00000630424 DIDO1Q9BTC0 2240 aaKnown RBP12.25□□□□□ -0.45
UBE3A-220ENST00000630424 CDRT15L2A8MXV6 281 aa12.25□□□□□ -0.45
UBE3A-220ENST00000630424 C11orf94C9JXX5 98 aa12.25□□□□□ -0.45
UBE3A-220ENST00000630424 MFNGO00587 321 aa12.25□□□□□ -0.45
UBE3A-220ENST00000630424 VAMP3Q15836 100 aa12.25□□□□□ -0.45
UBE3A-220ENST00000630424 PPP1R32Q7Z5V6 425 aa12.25□□□□□ -0.45
UBE3A-220ENST00000630424 PHOX2AO14813 284 aa12.25□□□□□ -0.45
UBE3A-220ENST00000630424 MELTFP08582 738 aa12.25□□□□□ -0.45
UBE3A-220ENST00000630424 RPEL1Q2QD12 228 aa12.25□□□□□ -0.45
UBE3A-220ENST00000630424 LRRC75BQ2VPJ9 315 aa12.25□□□□□ -0.45
UBE3A-220ENST00000630424 C19orf35Q6ZS72 473 aa12.25□□□□□ -0.45
UBE3A-220ENST00000630424 OR8G5Q8NG78 346 aa12.25□□□□□ -0.45
UBE3A-220ENST00000630424 KIAA1551Q9HCM1 1747 aa12.25□□□□□ -0.45
UBE3A-220ENST00000630424 A0A0U1RQV5 110 aa12.25□□□□□ -0.45
UBE3A-220ENST00000630424 HNRNPA3P51991 378 aaKnown RBP12.25□□□□□ -0.45
UBE3A-220ENST00000630424 EIF4EBP2Q13542 120 aaPredicted RBP12.25□□□□□ -0.45
UBE3A-220ENST00000630424 RRN3P1Q2M238 152 aa12.25□□□□□ -0.45
UBE3A-220ENST00000630424 TEX261Q6UWH6 196 aa12.25□□□□□ -0.45
UBE3A-220ENST00000630424 SNRNP40Q96DI7 357 aaKnown RBP12.25□□□□□ -0.45
UBE3A-220ENST00000630424 DCTN5Q9BTE1 182 aa12.25□□□□□ -0.45
UBE3A-220ENST00000630424 U3KQ87 197 aa12.25□□□□□ -0.45
UBE3A-220ENST00000630424 BDP1A6H8Y1 2624 aa12.24□□□□□ -0.45
UBE3A-220ENST00000630424 DCAF12L2Q5VW00 463 aa12.24□□□□□ -0.45
UBE3A-220ENST00000630424 IGSF23A1L1A6 192 aa12.24□□□□□ -0.45
UBE3A-220ENST00000630424 PTP4A3O75365 173 aa12.24□□□□□ -0.45
UBE3A-220ENST00000630424 CD1BP29016 333 aa12.24□□□□□ -0.45
UBE3A-220ENST00000630424 IZUMO4Q1ZYL8 232 aa12.24□□□□□ -0.45
UBE3A-220ENST00000630424 TM4SF20Q53R12 229 aa12.24□□□□□ -0.45
UBE3A-220ENST00000630424 LPAR5Q9H1C0 372 aa12.24□□□□□ -0.45
UBE3A-220ENST00000630424 KLHDC2Q9Y2U9 406 aa12.24□□□□□ -0.45
UBE3A-220ENST00000630424 LEUTXA8MZ59 168 aa12.24□□□□□ -0.45
UBE3A-220ENST00000630424 OR2H2O95918 312 aa12.24□□□□□ -0.45
UBE3A-220ENST00000630424 PF4P02776 101 aa12.24□□□□□ -0.45
UBE3A-220ENST00000630424 P2RY1P47900 373 aa12.24□□□□□ -0.45
UBE3A-220ENST00000630424 RANP62826 216 aaKnown RBP12.24□□□□□ -0.45
UBE3A-220ENST00000630424 DDB2Q92466 427 aa12.24□□□□□ -0.45
UBE3A-220ENST00000630424 IFNL4K9M1U5 179 aa12.24□□□□□ -0.45
UBE3A-220ENST00000630424 RHBDL1O75783 438 aa12.24□□□□□ -0.45
UBE3A-220ENST00000630424 CDS2O95674 445 aa12.24□□□□□ -0.45
UBE3A-220ENST00000630424 C16orf82Q7Z2V1 217 aa12.24□□□□□ -0.45
UBE3A-220ENST00000630424 SNX22Q96L94 193 aa12.24□□□□□ -0.45
UBE3A-220ENST00000630424 HYPMO75409 117 aa12.23□□□□□ -0.45
UBE3A-220ENST00000630424 HPRT1P00492 218 aa12.23□□□□□ -0.45
UBE3A-220ENST00000630424 PGA4P0DJD7 388 aa12.23□□□□□ -0.45
UBE3A-220ENST00000630424 USF1P22415 310 aaPredicted RBP12.23□□□□□ -0.45
UBE3A-220ENST00000630424 SPANXN1Q5VSR9 72 aa12.23□□□□□ -0.45
UBE3A-220ENST00000630424 CENPVQ7Z7K6 275 aaPredicted RBP12.23□□□□□ -0.45
UBE3A-220ENST00000630424 CALHM1Q8IU99 346 aa12.23□□□□□ -0.45
UBE3A-220ENST00000630424 GCSAMQ8N6F7 178 aa12.23□□□□□ -0.45
UBE3A-220ENST00000630424 KLF14Q8TD94 323 aaPredicted RBP12.23□□□□□ -0.45
UBE3A-220ENST00000630424 TIMP4Q99727 224 aa12.23□□□□□ -0.45
UBE3A-220ENST00000630424 MMP26Q9NRE1 261 aa12.23□□□□□ -0.45
UBE3A-220ENST00000630424 MIOXQ9UGB7 285 aa12.23□□□□□ -0.45
UBE3A-220ENST00000630424 CCDC88CQ9P219 2028 aa12.23□□□□□ -0.45
UBE3A-220ENST00000630424 LOC105371242A0A075B767 164 aa12.23□□□□□ -0.45
UBE3A-220ENST00000630424 LTBRP36941 435 aa12.23□□□□□ -0.45
UBE3A-220ENST00000630424 CEBPDP49716 269 aaPredicted RBP12.23□□□□□ -0.45
UBE3A-220ENST00000630424 SULT1A1P50225 295 aa12.23□□□□□ -0.45
UBE3A-220ENST00000630424 FGF12P61328 243 aa12.23□□□□□ -0.45
UBE3A-220ENST00000630424 TOMM20LQ6UXN7 152 aa12.23□□□□□ -0.45
UBE3A-220ENST00000630424 HIGD1AQ9Y241 93 aa12.23□□□□□ -0.45
UBE3A-220ENST00000630424 SHANK3Q9BYB0 1731 aa12.23□□□□□ -0.45
UBE3A-220ENST00000630424 CKAP5Q14008 2032 aa12.23□□□□□ -0.45
UBE3A-220ENST00000630424 IGHV1-69-2A0A0G2JMI3 117 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms