RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 DAPK2Q9UIK4 370 aa11.31□□□□□ -0.6
SNRPA1-216ENST00000626000 A0A0A6YYD4 124 aa11.3□□□□□ -0.6
SNRPA1-216ENST00000626000 CLPSL1A2RUU4 121 aa11.3□□□□□ -0.6
SNRPA1-216ENST00000626000 LY6LH3BQJ8 138 aa11.3□□□□□ -0.6
SNRPA1-216ENST00000626000 M0QZK8 103 aa11.3□□□□□ -0.6
SNRPA1-216ENST00000626000 YPEL1O60688 119 aa11.3□□□□□ -0.6
SNRPA1-216ENST00000626000 TSPAN9O75954 239 aa11.3□□□□□ -0.6
SNRPA1-216ENST00000626000 GAPDHP04406 335 aaKnown RBP11.3□□□□□ -0.6
SNRPA1-216ENST00000626000 FAM106CPP0CH98 169 aa11.3□□□□□ -0.6
SNRPA1-216ENST00000626000 HIST1H1DP16402 221 aaKnown RBP11.3□□□□□ -0.6
SNRPA1-216ENST00000626000 RCC1P18754 421 aaPredicted RBP11.3□□□□□ -0.6
SNRPA1-216ENST00000626000 GNG10P50151 68 aa11.3□□□□□ -0.6
SNRPA1-216ENST00000626000 PITPNAQ00169 270 aa11.3□□□□□ -0.6
SNRPA1-216ENST00000626000 ZNF880Q6PDB4 577 aa11.3□□□□□ -0.6
SNRPA1-216ENST00000626000 SHISA2Q6UWI4 295 aa11.3□□□□□ -0.6
SNRPA1-216ENST00000626000 PRR18Q8N4B5 295 aa11.3□□□□□ -0.6
SNRPA1-216ENST00000626000 ARHGAP5-AS1Q96IT6 56 aa11.3□□□□□ -0.6
SNRPA1-216ENST00000626000 YPEL2Q96QA6 119 aa11.3□□□□□ -0.6
SNRPA1-216ENST00000626000 PECRQ9BY49 303 aa11.3□□□□□ -0.6
SNRPA1-216ENST00000626000 ATG5Q9H1Y0 275 aa11.3□□□□□ -0.6
SNRPA1-216ENST00000626000 FBN3Q75N90 2809 aa11.29□□□□□ -0.6
SNRPA1-216ENST00000626000 TRAV39A0A0B4J263 110 aa11.29□□□□□ -0.6
SNRPA1-216ENST00000626000 FAM172BPA6NC97 362 aa11.29□□□□□ -0.6
SNRPA1-216ENST00000626000 TALDO1P37837 337 aa11.29□□□□□ -0.6
SNRPA1-216ENST00000626000 SERPINB10P48595 397 aa11.29□□□□□ -0.6
SNRPA1-216ENST00000626000 ZNF137PP52743 207 aa11.29□□□□□ -0.6
SNRPA1-216ENST00000626000 MXD1Q05195 221 aa11.29□□□□□ -0.6
SNRPA1-216ENST00000626000 ZNF816Q0VGE8 651 aaPredicted RBP11.29□□□□□ -0.6
SNRPA1-216ENST00000626000 SRSF7Q16629 238 aaKnown RBP eCLIP11.29□□□□□ -0.6
SNRPA1-216ENST00000626000 SLC25A48Q6ZT89 311 aaKnown RBP11.29□□□□□ -0.6
SNRPA1-216ENST00000626000 NR2C2APQ86WQ0 139 aa11.29□□□□□ -0.6
SNRPA1-216ENST00000626000 THNSL2Q86YJ6 484 aa11.29□□□□□ -0.6
SNRPA1-216ENST00000626000 OR13F1Q8NGS4 319 aa11.29□□□□□ -0.6
SNRPA1-216ENST00000626000 OR2T6Q8NHC8 308 aa11.29□□□□□ -0.6
SNRPA1-216ENST00000626000 EDARADDQ8WWZ3 215 aa11.29□□□□□ -0.6
SNRPA1-216ENST00000626000 KCTD12Q96CX2 325 aaKnown RBP11.29□□□□□ -0.6
SNRPA1-216ENST00000626000 ZNF747Q9BV97 191 aa11.29□□□□□ -0.6
SNRPA1-216ENST00000626000 AK3Q9UIJ7 227 aa11.29□□□□□ -0.6
SNRPA1-216ENST00000626000 A6NDX4 124 aa11.28□□□□□ -0.6
SNRPA1-216ENST00000626000 RAB27BO00194 218 aa11.28□□□□□ -0.6
SNRPA1-216ENST00000626000 MFNGO00587 321 aa11.28□□□□□ -0.6
SNRPA1-216ENST00000626000 ITGB1BP1O14713 200 aa11.28□□□□□ -0.6
SNRPA1-216ENST00000626000 HSD17B6O14756 317 aa11.28□□□□□ -0.6
SNRPA1-216ENST00000626000 GSTP1P09211 210 aaKnown RBP11.28□□□□□ -0.6
SNRPA1-216ENST00000626000 ZBTB25P24278 435 aa11.28□□□□□ -0.6
SNRPA1-216ENST00000626000 TMEM50BP56557 158 aa11.28□□□□□ -0.6
SNRPA1-216ENST00000626000 HLA-DRB3P79483 266 aa11.28□□□□□ -0.6
SNRPA1-216ENST00000626000 ARFRP1Q13795 201 aa11.28□□□□□ -0.6
SNRPA1-216ENST00000626000 LY6EQ16553 131 aa11.28□□□□□ -0.6
SNRPA1-216ENST00000626000 LDLRAD2Q5SZI1 272 aa11.28□□□□□ -0.6
SNRPA1-216ENST00000626000 OLFML2AQ68BL7 652 aa11.28□□□□□ -0.6
SNRPA1-216ENST00000626000 BAIAP2L2Q6UXY1 529 aa11.28□□□□□ -0.6
SNRPA1-216ENST00000626000 DYNAPQ8N1N2 210 aa11.28□□□□□ -0.6
SNRPA1-216ENST00000626000 OR2AK2Q8NG84 335 aa11.28□□□□□ -0.6
SNRPA1-216ENST00000626000 SETD6Q8TBK2 473 aa11.28□□□□□ -0.6
SNRPA1-216ENST00000626000 PIFOQ8TCI5 191 aa11.28□□□□□ -0.6
SNRPA1-216ENST00000626000 Q9N2K0 584 aa11.28□□□□□ -0.6
SNRPA1-216ENST00000626000 RHBDL2Q9NX52 303 aa11.28□□□□□ -0.6
SNRPA1-216ENST00000626000 HSPA12AO43301 675 aa11.27□□□□□ -0.61
SNRPA1-216ENST00000626000 SLC2A2P11168 524 aaPredicted RBP11.27□□□□□ -0.61
SNRPA1-216ENST00000626000 DTYMKP23919 212 aa11.27□□□□□ -0.61
SNRPA1-216ENST00000626000 PNLIPRP3Q17RR3 467 aa11.27□□□□□ -0.61
SNRPA1-216ENST00000626000 MORN2Q502X0 79 aa11.27□□□□□ -0.61
SNRPA1-216ENST00000626000 PLA1AQ53H76 456 aa11.27□□□□□ -0.61
SNRPA1-216ENST00000626000 PLAC9Q5JTB6 97 aa11.27□□□□□ -0.61
SNRPA1-216ENST00000626000 IDNKQ5T6J7 187 aa11.27□□□□□ -0.61
SNRPA1-216ENST00000626000 FAM71F2Q6NXP2 309 aa11.27□□□□□ -0.61
SNRPA1-216ENST00000626000 ZNF439Q8NDP4 499 aa11.27□□□□□ -0.61
SNRPA1-216ENST00000626000 OR4A4PQ8NGN8 299 aa11.27□□□□□ -0.61
SNRPA1-216ENST00000626000 OR1L1Q8NH94 360 aa11.27□□□□□ -0.61
SNRPA1-216ENST00000626000 LGALS14Q8TCE9 139 aa11.27□□□□□ -0.61
SNRPA1-216ENST00000626000 IL1F10Q8WWZ1 152 aa11.27□□□□□ -0.61
SNRPA1-216ENST00000626000 LEAP2Q969E1 77 aa11.27□□□□□ -0.61
SNRPA1-216ENST00000626000 ABHD14AQ9BUJ0 271 aa11.27□□□□□ -0.61
SNRPA1-216ENST00000626000 FUNDC2Q9BWH2 189 aa11.27□□□□□ -0.61
SNRPA1-216ENST00000626000 PRSS22Q9GZN4 317 aa11.27□□□□□ -0.61
SNRPA1-216ENST00000626000 DIABLOQ9NR28 239 aa11.27□□□□□ -0.61
SNRPA1-216ENST00000626000 PIPOXQ9P0Z9 390 aa11.27□□□□□ -0.61
SNRPA1-216ENST00000626000 SPATA2Q9UM82 520 aa11.27□□□□□ -0.61
SNRPA1-216ENST00000626000 RNF114Q9Y508 228 aa11.27□□□□□ -0.61
SNRPA1-216ENST00000626000 SMIM30A4D0T7 59 aa11.26□□□□□ -0.61
SNRPA1-216ENST00000626000 TRDCB7Z8K6 153 aa11.26□□□□□ -0.61
SNRPA1-216ENST00000626000 LANCL1O43813 399 aa11.26□□□□□ -0.61
SNRPA1-216ENST00000626000 OR2F2O95006 317 aa11.26□□□□□ -0.61
SNRPA1-216ENST00000626000 SMIM18P0DKX4 95 aa11.26□□□□□ -0.61
SNRPA1-216ENST00000626000 MDKP21741 143 aaPredicted RBP11.26□□□□□ -0.61
SNRPA1-216ENST00000626000 EFNB2P52799 333 aa11.26□□□□□ -0.61
SNRPA1-216ENST00000626000 HABP2Q14520 560 aaPredicted RBP11.26□□□□□ -0.61
SNRPA1-216ENST00000626000 Q6ZS49 121 aa11.26□□□□□ -0.61
SNRPA1-216ENST00000626000 Q6ZSV7 163 aa11.26□□□□□ -0.61
SNRPA1-216ENST00000626000 GPR141Q7Z602 305 aa11.26□□□□□ -0.61
SNRPA1-216ENST00000626000 ANKRD13BQ86YJ7 626 aa11.26□□□□□ -0.61
SNRPA1-216ENST00000626000 TGIF2LXQ8IUE1 241 aa11.26□□□□□ -0.61
SNRPA1-216ENST00000626000 ACOT12Q8WYK0 555 aa11.26□□□□□ -0.61
SNRPA1-216ENST00000626000 DCSTAMPQ9H295 470 aa11.26□□□□□ -0.61
SNRPA1-216ENST00000626000 IGHV3-43A0A0B4J1X8 118 aa11.25□□□□□ -0.61
SNRPA1-216ENST00000626000 A0A1W2PPI3 338 aa11.25□□□□□ -0.61
SNRPA1-216ENST00000626000 TIMM23O14925 209 aa11.25□□□□□ -0.61
SNRPA1-216ENST00000626000 GABARAPO95166 117 aa11.25□□□□□ -0.61
SNRPA1-216ENST00000626000 FCGR3AP08637 254 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms