RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 JPT1Q9UK76 154 aa13.71□□□□□ -0.21
LDB3-208ENST00000623007 LAMP3Q9UQV4 416 aa13.71□□□□□ -0.21
LDB3-208ENST00000623007 POMT1Q9Y6A1 747 aa13.71□□□□□ -0.21
LDB3-208ENST00000623007 H0YIZ8 118 aa13.7□□□□□ -0.22
LDB3-208ENST00000623007 SPDEFO95238 335 aa13.7□□□□□ -0.22
LDB3-208ENST00000623007 HBZP02008 142 aa13.7□□□□□ -0.22
LDB3-208ENST00000623007 OR4A8P0C604 315 aa13.7□□□□□ -0.22
LDB3-208ENST00000623007 ADIPOQQ15848 244 aa13.7□□□□□ -0.22
LDB3-208ENST00000623007 PRR18Q8N4B5 295 aa13.7□□□□□ -0.22
LDB3-208ENST00000623007 ZCCHC14Q8WYQ9 949 aaKnown RBP13.7□□□□□ -0.22
LDB3-208ENST00000623007 MARVELD3Q96A59 401 aa13.7□□□□□ -0.22
LDB3-208ENST00000623007 PFDN2Q9UHV9 154 aa13.7□□□□□ -0.22
LDB3-208ENST00000623007 PPP1R3CQ9UQK1 317 aa13.7□□□□□ -0.22
LDB3-208ENST00000623007 IGKV1D-17A0A075B6S4 117 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 IGHV3-64DA0A0J9YX35 117 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 A0A1B0GU03 582 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 ITGB1BP1O14713 200 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 JTBO76095 146 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 GAPDHP04406 335 aaKnown RBP13.69□□□□□ -0.22
LDB3-208ENST00000623007 RPL12P30050 165 aaKnown RBP13.69□□□□□ -0.22
LDB3-208ENST00000623007 CEBPDP49716 269 aaPredicted RBP13.69□□□□□ -0.22
LDB3-208ENST00000623007 TEX36Q5VZQ5 186 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 UNQ6494/PRO21346Q6UXR6 183 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 CD177Q8N6Q3 437 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 OR4D5Q8NGN0 318 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 ANGPTL6Q8NI99 470 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 WFIKKN1Q96NZ8 548 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 ZNF665Q9H7R5 613 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 OR5AC2Q9NZP5 309 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 OR1A1Q9P1Q5 309 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 SESN1Q9Y6P5 492 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 ZGRF1Q86YA3 2104 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 ODAMA1E959 279 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 ERVH48-1M5A8F1 160 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 CCL21O00585 134 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 CD3EP07766 207 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 RRASP10301 218 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 NKX2-1P43699 371 aaPredicted RBP13.69□□□□□ -0.22
LDB3-208ENST00000623007 P2RX3P56373 397 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 SNTB1Q13884 538 aaKnown RBP13.69□□□□□ -0.22
LDB3-208ENST00000623007 EFNB3Q15768 340 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 ZNF66Q6ZN08 573 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 FAM219AQ8IW50 185 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 BAP18Q8IXM2 172 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 ARL11Q969Q4 196 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 PRORYQ9H606 182 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 KCNS2Q9ULS6 477 aa13.69□□□□□ -0.22
LDB3-208ENST00000623007 SHANK1Q9Y566 2161 aa13.68□□□□□ -0.22
LDB3-208ENST00000623007 TRAV38-1A0A0B4J264 116 aa13.68□□□□□ -0.22
LDB3-208ENST00000623007 NKX6-3A6NJ46 265 aa13.68□□□□□ -0.22
LDB3-208ENST00000623007 MBPP02686 304 aaPredicted RBP13.68□□□□□ -0.22
LDB3-208ENST00000623007 EGR1P18146 543 aa13.68□□□□□ -0.22
LDB3-208ENST00000623007 NMSQ5H8A3 153 aa13.68□□□□□ -0.22
LDB3-208ENST00000623007 ALKAL2Q6UX46 152 aa13.68□□□□□ -0.22
LDB3-208ENST00000623007 C22orf34Q6ZV56 151 aa13.68□□□□□ -0.22
LDB3-208ENST00000623007 CD300LFQ8TDQ1 290 aa13.68□□□□□ -0.22
LDB3-208ENST00000623007 C14orf79Q96F83 325 aa13.68□□□□□ -0.22
LDB3-208ENST00000623007 LSM5Q9Y4Y9 91 aaKnown RBP13.68□□□□□ -0.22
LDB3-208ENST00000623007 CHD3Q12873 2000 aaKnown RBP13.67□□□□□ -0.22
LDB3-208ENST00000623007 B9A039 149 aa13.67□□□□□ -0.22
LDB3-208ENST00000623007 GPR137BO60478 399 aa13.67□□□□□ -0.22
LDB3-208ENST00000623007 OR8U9P0C7N5 309 aa13.67□□□□□ -0.22
LDB3-208ENST00000623007 HKR1P10072 659 aa13.67□□□□□ -0.22
LDB3-208ENST00000623007 APOBEC3AP31941 199 aaPredicted RBP13.67□□□□□ -0.22
LDB3-208ENST00000623007 BEX5Q5H9J7 111 aa13.67□□□□□ -0.22
LDB3-208ENST00000623007 STUMQ69YW2 141 aa13.67□□□□□ -0.22
LDB3-208ENST00000623007 OR8U1Q8NH10 309 aa13.67□□□□□ -0.22
LDB3-208ENST00000623007 LHFPL5Q8TAF8 219 aa13.67□□□□□ -0.22
LDB3-208ENST00000623007 MRGPRDQ8TDS7 321 aa13.67□□□□□ -0.22
LDB3-208ENST00000623007 HSD17B10Q99714 261 aaKnown RBP13.67□□□□□ -0.22
LDB3-208ENST00000623007 SLC25A31Q9H0C2 315 aa13.67□□□□□ -0.22
LDB3-208ENST00000623007 OR2S2Q9NQN1 319 aa13.67□□□□□ -0.22
LDB3-208ENST00000623007 AKAP13Q12802 2813 aa13.67□□□□□ -0.22
LDB3-208ENST00000623007 BORCS7-ASMTA0A0B4J1R7 106 aa13.66□□□□□ -0.22
LDB3-208ENST00000623007 ANKRD34BA5PLL1 514 aa13.66□□□□□ -0.22
LDB3-208ENST00000623007 YPEL1O60688 119 aa13.66□□□□□ -0.22
LDB3-208ENST00000623007 SCGB1D2O95969 90 aa13.66□□□□□ -0.22
LDB3-208ENST00000623007 GLIPR1P48060 266 aa13.66□□□□□ -0.22
LDB3-208ENST00000623007 RAB7AP51149 207 aa13.66□□□□□ -0.22
LDB3-208ENST00000623007 TLE1Q04724 770 aa13.66□□□□□ -0.22
LDB3-208ENST00000623007 OR1L1Q8NH94 360 aa13.66□□□□□ -0.22
LDB3-208ENST00000623007 RNASE11Q8TAA1 199 aaKnown RBP13.66□□□□□ -0.22
LDB3-208ENST00000623007 RRNAD1Q96FB5 475 aaKnown RBP13.66□□□□□ -0.22
LDB3-208ENST00000623007 YPEL2Q96QA6 119 aa13.66□□□□□ -0.22
LDB3-208ENST00000623007 LPAR3Q9UBY5 353 aa13.66□□□□□ -0.22
LDB3-208ENST00000623007 CACFD1Q9UGQ2 172 aa13.66□□□□□ -0.22
LDB3-208ENST00000623007 PTPRQQ9UMZ3 2332 aa13.66□□□□□ -0.22
LDB3-208ENST00000623007 NUDT19A8MXV4 375 aa13.66□□□□□ -0.22
LDB3-208ENST00000623007 LEUTXA8MZ59 168 aa13.66□□□□□ -0.22
LDB3-208ENST00000623007 F2RL2O00254 374 aa13.66□□□□□ -0.22
LDB3-208ENST00000623007 WRBO00258 174 aa13.66□□□□□ -0.22
LDB3-208ENST00000623007 NMBP08949 121 aa13.66□□□□□ -0.22
LDB3-208ENST00000623007 DRAM1Q8N682 238 aa13.66□□□□□ -0.22
LDB3-208ENST00000623007 BOLLQ8N9W6 283 aaKnown RBP13.66□□□□□ -0.22
LDB3-208ENST00000623007 RNF141Q8WVD5 230 aa13.66□□□□□ -0.22
LDB3-208ENST00000623007 SAP30LQ9HAJ7 183 aa13.66□□□□□ -0.22
LDB3-208ENST00000623007 COA4Q9NYJ1 87 aa13.66□□□□□ -0.22
LDB3-208ENST00000623007 GAB2Q9UQC2 676 aa13.66□□□□□ -0.22
LDB3-208ENST00000623007 TRGV10A0A0A0MS01 117 aa13.65□□□□□ -0.22
LDB3-208ENST00000623007 NKX2-6A6NCS4 301 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms