RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 GAPDHP04406 335 aaKnown RBP11.37□□□□□ -0.59
SIRPA-204ENST00000622179 CTSSP25774 331 aa11.37□□□□□ -0.59
SIRPA-204ENST00000622179 ERVS71-1P61550 626 aa11.37□□□□□ -0.59
SIRPA-204ENST00000622179 TNFAIP6P98066 277 aaPredicted RBP11.37□□□□□ -0.59
SIRPA-204ENST00000622179 FAM89BQ8N5H3 189 aa11.37□□□□□ -0.59
SIRPA-204ENST00000622179 MTCH1Q9NZJ7 389 aa11.37□□□□□ -0.59
SIRPA-204ENST00000622179 KCNMB2Q9Y691 235 aa11.37□□□□□ -0.59
SIRPA-204ENST00000622179 PPP5D1E7EU14 171 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 RRP8O43159 456 aaKnown RBP11.36□□□□□ -0.59
SIRPA-204ENST00000622179 EIF3GO75821 320 aaKnown RBP eCLIP11.36□□□□□ -0.59
SIRPA-204ENST00000622179 NEURL1O76050 574 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 MBP02144 154 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 SULT1A1P50225 295 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 RAB13P51153 203 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 ZNF528Q3MIS6 628 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 NCR3LG1Q68D85 454 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 ATRAIDQ6UW56 229 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 BMPERQ8N8U9 685 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 CCL17Q92583 94 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 MARVELD3Q96A59 401 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 E9PLN8 166 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 SRSF10O75494 262 aaKnown RBP11.36□□□□□ -0.59
SIRPA-204ENST00000622179 CRYBA1P05813 215 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 GGNQ86UU5 652 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 RBMXL3Q8N7X1 1067 aaKnown RBP11.36□□□□□ -0.59
SIRPA-204ENST00000622179 ABHD14BQ96IU4 210 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 TMEM68Q96MH6 324 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 RSRP1Q9BUV0 290 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 REPIN1Q9BWE0 567 aaKnown RBP11.36□□□□□ -0.59
SIRPA-204ENST00000622179 COMMD5Q9GZQ3 224 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 PCDH15Q96QU1 1955 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 A0A1W2PPQ1 181 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 LHX2P50458 406 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 C1QTNF5Q9BXJ0 243 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 A0A1B0GU03 582 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 A0A1W2PPE2 198 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 A0A1W2PPE3 182 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 IGFBP7Q16270 282 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 RTL8BQ17RB0 113 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 NSUN5P2Q63ZY6 315 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 OR1L1Q8NH94 360 aa11.36□□□□□ -0.59
SIRPA-204ENST00000622179 HOXD4P09016 255 aaPredicted RBP11.35□□□□□ -0.59
SIRPA-204ENST00000622179 RD3LP0DJH9 198 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 CLDN18P56856 261 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 ABLIM2Q6H8Q1 611 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 LINC00596Q86U02 117 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 SELENOHQ8IZQ5 122 aaKnown RBP11.35□□□□□ -0.59
SIRPA-204ENST00000622179 UBAC2Q8NBM4 344 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 TMEM45BQ96B21 275 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 GUCD1Q96NT3 240 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 RSG1Q9BU20 258 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 LINC00470Q9BZP3 86 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 IGKV1-12A0A0C4DH73 117 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 IGKV1D-12P01611 117 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 COX5BP10606 129 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 CD200P41217 278 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 COL10A1Q03692 680 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 ETV3LQ6ZN32 361 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 KLF14Q8TD94 323 aaPredicted RBP11.35□□□□□ -0.59
SIRPA-204ENST00000622179 CLN8Q9UBY8 286 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 LY6G6EA0A0G2JKS1 128 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 FAM90A10PA6NDY2 464 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 FAM90A18PA6NE21 464 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 FAM90A16PA6NEW6 464 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 FAM90A20PA6NIJ5 464 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 FAM90A8PA6NJQ4 464 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 FAM90A7PA6NKC0 464 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 ZNF705FA8MVS1 300 aaPredicted RBP11.35□□□□□ -0.59
SIRPA-204ENST00000622179 FAM90A22PA8MWA6 464 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 FAM90A12PA8MX19 464 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 FAM90A5PA8MXJ8 464 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 A8MXK9 166 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 FAM90A23PA8MXZ1 464 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 FAM90A15PP0C7V4 464 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 FAM90A13PP0C7W8 464 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 FAM90A14PP0C7W9 464 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 FAM90A24PP0C7X0 464 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 ZNF705DP0CH99 300 aaPredicted RBP11.35□□□□□ -0.59
SIRPA-204ENST00000622179 ZNF705BP0CI00 300 aaPredicted RBP11.35□□□□□ -0.59
SIRPA-204ENST00000622179 MRPL41Q8IXM3 137 aaKnown RBP11.35□□□□□ -0.59
SIRPA-204ENST00000622179 DTD1Q8TEA8 209 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 U3KQA8 63 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 OR7C2O60412 319 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 ZNF737O75373 536 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 MGST1P10620 155 aaKnown RBP11.35□□□□□ -0.59
SIRPA-204ENST00000622179 CRYGSP22914 178 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 OR10G4Q8NGN3 311 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 OR10G9Q8NGN4 311 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 OR10G7Q8NGN6 311 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 OR5P3Q8WZ94 311 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 GPR146Q96CH1 333 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 R3HDM4Q96D70 268 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 KCNIP2Q9NS61 270 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 ZNF581Q9P0T4 197 aa11.35□□□□□ -0.59
SIRPA-204ENST00000622179 CADP27708 2225 aa11.34□□□□□ -0.59
SIRPA-204ENST00000622179 HBZP02008 142 aa11.34□□□□□ -0.59
SIRPA-204ENST00000622179 ZNF883P0CG24 379 aa11.34□□□□□ -0.59
SIRPA-204ENST00000622179 LDLRAD3Q86YD5 345 aa11.34□□□□□ -0.59
SIRPA-204ENST00000622179 BOD1Q96IK1 185 aa11.34□□□□□ -0.59
SIRPA-204ENST00000622179 DIDO1Q9BTC0 2240 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms