RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 ZNF230Q9UIE0 474 aaPredicted RBP11.56□□□□□ -0.56
CBWD3-217ENST00000621474 POMT1Q9Y6A1 747 aa11.56□□□□□ -0.56
CBWD3-217ENST00000621474 IGKV1D-8A0A087WSZ0 117 aa11.55□□□□□ -0.56
CBWD3-217ENST00000621474 A0A0A6YYH2 397 aa11.55□□□□□ -0.56
CBWD3-217ENST00000621474 A6NJ64 397 aa11.55□□□□□ -0.56
CBWD3-217ENST00000621474 VGLL3A8MV65 326 aa11.55□□□□□ -0.56
CBWD3-217ENST00000621474 SSX5O60225 188 aa11.55□□□□□ -0.56
CBWD3-217ENST00000621474 EIF4EP06730 217 aaKnown RBP11.55□□□□□ -0.56
CBWD3-217ENST00000621474 CD3GP09693 182 aa11.55□□□□□ -0.56
CBWD3-217ENST00000621474 PTHLHP12272 177 aa11.55□□□□□ -0.56
CBWD3-217ENST00000621474 TMEM30BQ3MIR4 351 aa11.55□□□□□ -0.56
CBWD3-217ENST00000621474 Q3ZCU0 254 aa11.55□□□□□ -0.56
CBWD3-217ENST00000621474 MORN2Q502X0 79 aa11.55□□□□□ -0.56
CBWD3-217ENST00000621474 TMEM86BQ8N661 226 aa11.55□□□□□ -0.56
CBWD3-217ENST00000621474 C8orf31Q8N9H6 132 aa11.55□□□□□ -0.56
CBWD3-217ENST00000621474 OR10V1Q8NGI7 309 aa11.55□□□□□ -0.56
CBWD3-217ENST00000621474 SETD6Q8TBK2 473 aa11.55□□□□□ -0.56
CBWD3-217ENST00000621474 ZFAND2BQ8WV99 257 aa11.55□□□□□ -0.56
CBWD3-217ENST00000621474 NUDCD2Q8WVJ2 157 aa11.55□□□□□ -0.56
CBWD3-217ENST00000621474 MAFIPQ8WZ33 124 aa11.55□□□□□ -0.56
CBWD3-217ENST00000621474 GALMQ96C23 342 aa11.55□□□□□ -0.56
CBWD3-217ENST00000621474 SSX3Q99909 188 aa11.55□□□□□ -0.56
CBWD3-217ENST00000621474 OR2S2Q9NQN1 319 aa11.55□□□□□ -0.56
CBWD3-217ENST00000621474 TNFRSF19Q9NS68 423 aa11.55□□□□□ -0.56
CBWD3-217ENST00000621474 DPM3Q9P2X0 92 aa11.55□□□□□ -0.56
CBWD3-217ENST00000621474 COMMD3Q9UBI1 195 aa11.55□□□□□ -0.56
CBWD3-217ENST00000621474 JPT1Q9UK76 154 aa11.55□□□□□ -0.56
CBWD3-217ENST00000621474 HILPDAQ9Y5L2 63 aa11.55□□□□□ -0.56
CBWD3-217ENST00000621474 GSTP1P09211 210 aaKnown RBP11.54□□□□□ -0.56
CBWD3-217ENST00000621474 ZNF182P17025 639 aaPredicted RBP11.54□□□□□ -0.56
CBWD3-217ENST00000621474 PPP1CCP36873 323 aaKnown RBP11.54□□□□□ -0.56
CBWD3-217ENST00000621474 PRRX1P54821 245 aa11.54□□□□□ -0.56
CBWD3-217ENST00000621474 FBLN7Q53RD9 439 aa11.54□□□□□ -0.56
CBWD3-217ENST00000621474 CT45A1Q5HYN5 189 aa11.54□□□□□ -0.56
CBWD3-217ENST00000621474 SLC25A48Q6ZT89 311 aaKnown RBP11.54□□□□□ -0.56
CBWD3-217ENST00000621474 IZUMO1Q8IYV9 350 aa11.54□□□□□ -0.56
CBWD3-217ENST00000621474 LINC00311Q8N616 119 aa11.54□□□□□ -0.56
CBWD3-217ENST00000621474 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.54□□□□□ -0.56
CBWD3-217ENST00000621474 DTX3Q8N9I9 347 aa11.54□□□□□ -0.56
CBWD3-217ENST00000621474 CT45A3Q8NHU0 189 aa11.54□□□□□ -0.56
CBWD3-217ENST00000621474 TAF15Q92804 592 aaKnown RBP eCLIP11.54□□□□□ -0.56
CBWD3-217ENST00000621474 GNG12Q9UBI6 72 aa11.54□□□□□ -0.56
CBWD3-217ENST00000621474 TRAV18A0A075B6X5 111 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 H3BUX3 64 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 TOR1AO14656 332 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 XRCC3O43542 346 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 YPEL1O60688 119 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 RAB13P51153 203 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 ARFRP1Q13795 201 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 ARL6IP1Q15041 203 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 AANATQ16613 207 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 LRRC75BQ2VPJ9 315 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 PLA1AQ53H76 456 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 TPTE2P1Q5T6R2 138 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 Q6ZS49 121 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 FAM216AQ8WUB2 273 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 IL1F10Q8WWZ1 152 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 ACOT12Q8WYK0 555 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 ST6GALNAC6Q969X2 333 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 YPEL2Q96QA6 119 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 PARP12Q9H0J9 701 aaKnown RBP11.53□□□□□ -0.56
CBWD3-217ENST00000621474 RAB9BQ9NP90 201 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 OR1A1Q9P1Q5 309 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 LEUTXA8MZ59 168 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 TRDCB7Z8K6 153 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 TRIM77I1YAP6 450 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 HPGDSO60760 199 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 GSTT2P0CG29 244 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 GSTT2BP0CG30 244 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 ELK1P19419 428 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 DYNLT3P51808 116 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 SRSF7Q16629 238 aaKnown RBP eCLIP11.53□□□□□ -0.56
CBWD3-217ENST00000621474 PNLIPRP3Q17RR3 467 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 C16orf87Q6PH81 154 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 ODF3L1Q8IXM7 274 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 S100A16Q96FQ6 103 aaKnown RBP11.53□□□□□ -0.56
CBWD3-217ENST00000621474 CMTM3Q96MX0 182 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 OCSTAMPQ9BR26 566 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 DPAGT1Q9H3H5 408 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 AUNIPQ9H7T9 357 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 VPREB3Q9UKI3 123 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 MGAT4AQ9UM21 535 aa11.53□□□□□ -0.56
CBWD3-217ENST00000621474 A0A1W2PPI3 338 aa11.52□□□□□ -0.57
CBWD3-217ENST00000621474 APOA1P02647 267 aa11.52□□□□□ -0.57
CBWD3-217ENST00000621474 DTYMKP23919 212 aa11.52□□□□□ -0.57
CBWD3-217ENST00000621474 ZNF137PP52743 207 aa11.52□□□□□ -0.57
CBWD3-217ENST00000621474 MRPS15P82914 257 aaKnown RBP11.52□□□□□ -0.57
CBWD3-217ENST00000621474 IGSF11Q5DX21 431 aa11.52□□□□□ -0.57
CBWD3-217ENST00000621474 LY6G6FQ5SQ64 297 aa11.52□□□□□ -0.57
CBWD3-217ENST00000621474 STEAP3Q658P3 488 aa11.52□□□□□ -0.57
CBWD3-217ENST00000621474 CCBE1Q6UXH8 406 aaPredicted RBP11.52□□□□□ -0.57
CBWD3-217ENST00000621474 GCDHQ92947 438 aaPredicted RBP11.52□□□□□ -0.57
CBWD3-217ENST00000621474 CREB3L1Q96BA8 519 aa11.52□□□□□ -0.57
CBWD3-217ENST00000621474 PHF21AQ96BD5 680 aa11.52□□□□□ -0.57
CBWD3-217ENST00000621474 CABLES2Q9BTV7 478 aa11.52□□□□□ -0.57
CBWD3-217ENST00000621474 C19orf24Q9BVV8 132 aa11.52□□□□□ -0.57
CBWD3-217ENST00000621474 SLIRPQ9GZT3 109 aaKnown RBP11.52□□□□□ -0.57
CBWD3-217ENST00000621474 DIABLOQ9NR28 239 aa11.52□□□□□ -0.57
CBWD3-217ENST00000621474 CCDC59Q9P031 241 aaKnown RBP11.52□□□□□ -0.57
CBWD3-217ENST00000621474 SLC23A1Q9UHI7 598 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms