RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 FAM185AQ8N0U4 392 aa17.96■□□□□ 0.46
LIME1-210ENST00000621325 TP53TG5Q9Y2B4 290 aa17.96■□□□□ 0.46
LIME1-210ENST00000621325 DMRT1Q9Y5R6 373 aa17.96■□□□□ 0.46
LIME1-210ENST00000621325 PROB1E7EW31 1015 aa17.95■□□□□ 0.46
LIME1-210ENST00000621325 K7EPK0 472 aa17.95■□□□□ 0.46
LIME1-210ENST00000621325 RND3P61587 244 aa17.95■□□□□ 0.46
LIME1-210ENST00000621325 LRP11Q86VZ4 500 aa17.95■□□□□ 0.46
LIME1-210ENST00000621325 SVBPQ8N300 66 aa17.95■□□□□ 0.46
LIME1-210ENST00000621325 FAM71E2Q8N5Q1 922 aa17.95■□□□□ 0.46
LIME1-210ENST00000621325 TMED6Q8WW62 240 aa17.95■□□□□ 0.46
LIME1-210ENST00000621325 CABLES2Q9BTV7 478 aa17.95■□□□□ 0.46
LIME1-210ENST00000621325 ERRFI1Q9UJM3 462 aaPredicted RBP17.95■□□□□ 0.46
LIME1-210ENST00000621325 TRAPPC2LQ9UL33 140 aa17.95■□□□□ 0.46
LIME1-210ENST00000621325 M0R1B8 84 aa17.94■□□□□ 0.46
LIME1-210ENST00000621325 SLC31A2O15432 143 aa17.94■□□□□ 0.46
LIME1-210ENST00000621325 RPL12P30050 165 aaKnown RBP17.94■□□□□ 0.46
LIME1-210ENST00000621325 SSX2Q16385 188 aa17.94■□□□□ 0.46
LIME1-210ENST00000621325 MBNL2Q5VZF2 373 aaKnown RBP17.94■□□□□ 0.46
LIME1-210ENST00000621325 FAM180AQ6UWF9 173 aa17.94■□□□□ 0.46
LIME1-210ENST00000621325 CLEC9AQ6UXN8 241 aa17.94■□□□□ 0.46
LIME1-210ENST00000621325 WDR82Q6UXN9 313 aa17.94■□□□□ 0.46
LIME1-210ENST00000621325 C14orf144Q96I85 54 aa17.94■□□□□ 0.46
LIME1-210ENST00000621325 SCNM1Q9BWG6 230 aa17.94■□□□□ 0.46
LIME1-210ENST00000621325 ZFP57Q9NU63 452 aa17.94■□□□□ 0.46
LIME1-210ENST00000621325 OR2W1Q9Y3N9 320 aa17.94■□□□□ 0.46
LIME1-210ENST00000621325 NKX2-6A6NCS4 301 aa17.94■□□□□ 0.46
LIME1-210ENST00000621325 TIMP3P35625 211 aa17.94■□□□□ 0.46
LIME1-210ENST00000621325 MDH2P40926 338 aaKnown RBP17.94■□□□□ 0.46
LIME1-210ENST00000621325 PCP4P48539 62 aa17.94■□□□□ 0.46
LIME1-210ENST00000621325 FAM57AQ8TBR7 257 aa17.94■□□□□ 0.46
LIME1-210ENST00000621325 A0A1W2PPE3 182 aa17.93■□□□□ 0.46
LIME1-210ENST00000621325 RNF212Q495C1 297 aa17.93■□□□□ 0.46
LIME1-210ENST00000621325 RPL7L1Q6DKI1 246 aaKnown RBP17.93■□□□□ 0.46
LIME1-210ENST00000621325 C22orf34Q6ZV56 151 aa17.93■□□□□ 0.46
LIME1-210ENST00000621325 SPACA3Q8IXA5 215 aa17.93■□□□□ 0.46
LIME1-210ENST00000621325 MEGF10Q96KG7 1140 aa17.93■□□□□ 0.46
LIME1-210ENST00000621325 TREM2Q9NZC2 230 aa17.93■□□□□ 0.46
LIME1-210ENST00000621325 DUSP13Q9UII6 198 aa17.93■□□□□ 0.46
LIME1-210ENST00000621325 SPCS3P61009 180 aa17.93■□□□□ 0.46
LIME1-210ENST00000621325 RAB5BP61020 215 aa17.93■□□□□ 0.46
LIME1-210ENST00000621325 FABP9Q0Z7S8 132 aa17.93■□□□□ 0.46
LIME1-210ENST00000621325 TIMM23BQ5SRD1 257 aa17.93■□□□□ 0.46
LIME1-210ENST00000621325 SELENOHQ8IZQ5 122 aaKnown RBP17.93■□□□□ 0.46
LIME1-210ENST00000621325 FAM169BQ8N8A8 192 aa17.93■□□□□ 0.46
LIME1-210ENST00000621325 TMEM56Q96MV1 263 aa17.93■□□□□ 0.46
LIME1-210ENST00000621325 PARP12Q9H0J9 701 aaKnown RBP17.93■□□□□ 0.46
LIME1-210ENST00000621325 TMED3Q9Y3Q3 217 aa17.93■□□□□ 0.46
LIME1-210ENST00000621325 TMEM56-RWDD3S4R434 201 aa17.93■□□□□ 0.46
LIME1-210ENST00000621325 PGLYRP1O75594 196 aaPredicted RBP17.92■□□□□ 0.46
LIME1-210ENST00000621325 TUBG1P23258 451 aa17.92■□□□□ 0.46
LIME1-210ENST00000621325 TAS2R60P59551 318 aa17.92■□□□□ 0.46
LIME1-210ENST00000621325 AKIRIN2Q53H80 203 aa17.92■□□□□ 0.46
LIME1-210ENST00000621325 KRTCAP3Q53RY4 240 aa17.92■□□□□ 0.46
LIME1-210ENST00000621325 ZNF695Q8IW36 515 aa17.92■□□□□ 0.46
LIME1-210ENST00000621325 SPAG16Q8N0X2 631 aa17.92■□□□□ 0.46
LIME1-210ENST00000621325 BSCL2Q96G97 398 aaPredicted RBP17.92■□□□□ 0.46
LIME1-210ENST00000621325 SMIM3Q9BZL3 60 aa17.92■□□□□ 0.46
LIME1-210ENST00000621325 TLNRD1Q9H1K6 362 aa17.92■□□□□ 0.46
LIME1-210ENST00000621325 TUBG2Q9NRH3 451 aa17.92■□□□□ 0.46
LIME1-210ENST00000621325 TAAR3PQ9P1P4 343 aa17.92■□□□□ 0.46
LIME1-210ENST00000621325 ZDHHC8Q9ULC8 765 aa17.92■□□□□ 0.46
LIME1-210ENST00000621325 C1QTNF9BB2RNN3 333 aa17.92■□□□□ 0.46
LIME1-210ENST00000621325 CEACAM8P31997 349 aaPredicted RBP17.92■□□□□ 0.46
LIME1-210ENST00000621325 NPBWR1P48145 328 aa17.92■□□□□ 0.46
LIME1-210ENST00000621325 CISD2Q8N5K1 135 aaKnown RBP17.92■□□□□ 0.46
LIME1-210ENST00000621325 SSUH2Q9Y2M2 353 aa17.92■□□□□ 0.46
LIME1-210ENST00000621325 PTBP3O95758 552 aaKnown RBP17.91■□□□□ 0.46
LIME1-210ENST00000621325 FAM27E3Q08E93 113 aa17.91■□□□□ 0.46
LIME1-210ENST00000621325 TESK1Q15569 626 aa17.91■□□□□ 0.46
LIME1-210ENST00000621325 ACP7Q6ZNF0 438 aa17.91■□□□□ 0.46
LIME1-210ENST00000621325 CMTM1Q8IZ96 169 aa17.91■□□□□ 0.46
LIME1-210ENST00000621325 OR2Z1Q8NG97 314 aa17.91■□□□□ 0.46
LIME1-210ENST00000621325 TAF9BQ9HBM6 251 aa17.91■□□□□ 0.46
LIME1-210ENST00000621325 FBXL17Q9UF56 701 aa17.91■□□□□ 0.46
LIME1-210ENST00000621325 ZGRF1Q86YA3 2104 aa17.91■□□□□ 0.46
LIME1-210ENST00000621325 TMEM218A2RU14 115 aa17.91■□□□□ 0.46
LIME1-210ENST00000621325 CDS2O95674 445 aa17.91■□□□□ 0.46
LIME1-210ENST00000621325 BMP5P22003 454 aa17.91■□□□□ 0.46
LIME1-210ENST00000621325 NFYBP25208 207 aa17.91■□□□□ 0.46
LIME1-210ENST00000621325 TMEM33P57088 247 aa17.91■□□□□ 0.46
LIME1-210ENST00000621325 OR4D5Q8NGN0 318 aa17.91■□□□□ 0.46
LIME1-210ENST00000621325 ERGIC1Q969X5 290 aa17.91■□□□□ 0.46
LIME1-210ENST00000621325 MBNL3Q9NUK0 354 aaKnown RBP17.91■□□□□ 0.46
LIME1-210ENST00000621325 METRNQ9UJH8 293 aa17.91■□□□□ 0.46
LIME1-210ENST00000621325 MOB1BQ7L9L4 216 aa17.9■□□□□ 0.46
LIME1-210ENST00000621325 Q8NA96 180 aa17.9■□□□□ 0.46
LIME1-210ENST00000621325 TCEAL7Q9BRU2 100 aa17.9■□□□□ 0.46
LIME1-210ENST00000621325 SFXN3Q9BWM7 321 aa17.9■□□□□ 0.46
LIME1-210ENST00000621325 CHD3Q12873 2000 aaKnown RBP17.9■□□□□ 0.46
LIME1-210ENST00000621325 IGLV2-14P01704 120 aa17.9■□□□□ 0.46
LIME1-210ENST00000621325 UCP1P25874 307 aa17.9■□□□□ 0.46
LIME1-210ENST00000621325 SRPXP78539 464 aa17.9■□□□□ 0.46
LIME1-210ENST00000621325 AESQ08117 197 aa17.9■□□□□ 0.46
LIME1-210ENST00000621325 VHLLQ6RSH7 139 aa17.9■□□□□ 0.46
LIME1-210ENST00000621325 OR10V1Q8NGI7 309 aa17.9■□□□□ 0.46
LIME1-210ENST00000621325 OR51H1Q8NH63 302 aa17.9■□□□□ 0.46
LIME1-210ENST00000621325 WIPI2Q9Y4P8 454 aa17.9■□□□□ 0.46
LIME1-210ENST00000621325 ICE1Q9Y2F5 2266 aa17.9■□□□□ 0.46
LIME1-210ENST00000621325 E5RGE8 158 aa17.89■□□□□ 0.45
LIME1-210ENST00000621325 HSPA12AO43301 675 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms