RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 TOLLIPQ9H0E2 274 aa6.6□□□□□ -1.35
CPNE3-209ENST00000620393 GAL3ST2Q9H3Q3 398 aa6.6□□□□□ -1.35
CPNE3-209ENST00000620393 OR2S2Q9NQN1 319 aa6.6□□□□□ -1.35
CPNE3-209ENST00000620393 SLC2A8Q9NY64 477 aa6.6□□□□□ -1.35
CPNE3-209ENST00000620393 IDI2-AS1Q9NZ38 188 aa6.6□□□□□ -1.35
CPNE3-209ENST00000620393 TACC2O95359 2948 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 ABCA12Q86UK0 2595 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 KRTAP9-6A0A140TA67 174 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 FAM157AC9JC47 383 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 M0R1W7 72 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 HSPA12AO43301 675 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 ENSAO43768 121 aaKnown RBP6.59□□□□□ -1.35
CPNE3-209ENST00000620393 YPEL1O60688 119 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 TUSC2O75896 110 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 MMP23AO75900 390 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 RBP4P02753 201 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 NFYAP23511 347 aaPredicted RBP6.59□□□□□ -1.35
CPNE3-209ENST00000620393 OMGP23515 440 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 BTCP35070 178 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 CCR6P51684 374 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 ERVFRD-1P60508 538 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 LCN2P80188 198 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 TMEM30BQ3MIR4 351 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 MORN2Q502X0 79 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 PLA1AQ53H76 456 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 LY6G6FQ5SQ64 297 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 IDO2Q6ZQW0 420 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 LHFPL1Q86WI0 220 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 H1FOOQ8IZA3 346 aaPredicted RBP6.59□□□□□ -1.35
CPNE3-209ENST00000620393 DACT3Q96B18 629 aaPredicted RBP6.59□□□□□ -1.35
CPNE3-209ENST00000620393 Q96MF0 132 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 YPEL2Q96QA6 119 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 SLC25A21Q9BQT8 299 aaPredicted RBP6.59□□□□□ -1.35
CPNE3-209ENST00000620393 GINS4Q9BRT9 223 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 ZNF2Q9BSG1 426 aaPredicted RBP6.59□□□□□ -1.35
CPNE3-209ENST00000620393 TMPRSS13Q9BYE2 586 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 DPAGT1Q9H3H5 408 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 MMP26Q9NRE1 261 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 GFOD1Q9NXC2 390 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 RDH8Q9NYR8 311 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 OR1A1Q9P1Q5 309 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 SLC23A1Q9UHI7 598 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 JPT1Q9UK76 154 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 CENPEQ02224 2701 aa6.59□□□□□ -1.35
CPNE3-209ENST00000620393 POLQO75417 2590 aa6.59□□□□□ -1.36
CPNE3-209ENST00000620393 APCP25054 2843 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 TANC2Q9HCD6 1990 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 HECTD1Q9ULT8 2610 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 IGHV2-70DA0A0C4DH43 119 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 hCG_1809904A0A1W2PP81 198 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 A0A1W2PPE2 198 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 A0A1W2PR64 198 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 A0A1W2PRV1 198 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 OR5H14A6NHG9 310 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 B4DSR2 109 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 ITGB1BP1O14713 200 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 RGS11O94810 467 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 NDUFB6O95139 128 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 PTTG1O95997 202 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 PPYP01298 95 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 TCRBP04435 133 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 AADACP22760 399 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 NFYBP25208 207 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 UCP3P55916 312 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 ARF6P62330 175 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 PAX8Q06710 450 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 OXA1LQ15070 435 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 LTC4SQ16873 150 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 Q3ZCU0 254 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 SCGB2B2Q4G0G5 96 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 PRAMEF5Q5TYX0 476 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 AADACL3Q5VUY0 350 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 FAM53AQ6NSI3 398 aaPredicted RBP6.58□□□□□ -1.36
CPNE3-209ENST00000620393 KIR3DL3Q8N743 410 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 Q8N7P7 452 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 OR10V1Q8NGI7 309 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 OR13C8Q8NGS7 320 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 ENKURQ8TC29 256 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 CHPT1Q8WUD6 406 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 MRGPRFQ96AM1 343 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 MOB3AQ96BX8 217 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 SCGB3A2Q96PL1 93 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 COPZ2Q9P299 210 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 GNG12Q9UBI6 72 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 ZNF69Q9UC07 566 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 GPR132Q9UNW8 380 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 OR2W1Q9Y3N9 320 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 INSIG2Q9Y5U4 225 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 KPTNQ9Y664 436 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 SESN1Q9Y6P5 492 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 UNC79Q9P2D8 2635 aa6.58□□□□□ -1.36
CPNE3-209ENST00000620393 A0A087X0M5 115 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 IGHV3-43A0A0B4J1X8 118 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 A0A1B0GX30 115 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 FAM172BPA6NC97 362 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 MSMBP08118 114 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 OR8U9P0C7N5 309 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 IGHV1-8P0DP01 117 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 IGHV3-43DP0DP04 118 aa6.57□□□□□ -1.36
CPNE3-209ENST00000620393 SPNP16150 400 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms