RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 TAF9BQ9HBM6 251 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.62□□□□□ -1.35
NEK3-209ENST00000618856 AK3Q9UIJ7 227 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 PITPNC1Q9UKF7 332 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 TRAPPC2LQ9UL33 140 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 AMMECR1Q9Y4X0 333 aaPredicted RBP6.62□□□□□ -1.35
NEK3-209ENST00000618856 HILPDAQ9Y5L2 63 aa6.62□□□□□ -1.35
NEK3-209ENST00000618856 SDCBPO00560 298 aaPredicted RBP6.61□□□□□ -1.35
NEK3-209ENST00000618856 MFNGO00587 321 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 ITGB1BP1O14713 200 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 SPINT2O43291 252 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 YPEL1O60688 119 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 CRYBA1P05813 215 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 SLC2A2P11168 524 aaPredicted RBP6.61□□□□□ -1.35
NEK3-209ENST00000618856 VEGFCP49767 419 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 RAB7AP51149 207 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 KRTAP10-3P60369 221 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 MADCAM1Q13477 382 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 DIAPH2-AS1Q14236 149 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 LY6EQ16553 131 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 SRSF7Q16629 238 aaKnown RBP eCLIP6.61□□□□□ -1.35
NEK3-209ENST00000618856 MORN2Q502X0 79 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 DHRS7BQ6IAN0 325 aaPredicted RBP6.61□□□□□ -1.35
NEK3-209ENST00000618856 CCDC144NLQ6NUI1 221 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 SFXN4Q6P4A7 337 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 SHISA2Q6UWI4 295 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 Q6ZS49 121 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 Q6ZTK2 550 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 MOB1BQ7L9L4 216 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 C16orf82Q7Z2V1 217 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 C5orf24Q7Z6I8 188 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 OR8H3Q8N146 312 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 C3orf56Q8N813 242 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 OR13F1Q8NGS4 319 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 OR10R2Q8NGX6 335 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 NDNFQ8TB73 568 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 NEK7Q8TDX7 302 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 YPEL2Q96QA6 119 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 CITED1Q99966 193 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 CHCHD6Q9BRQ6 235 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 TOLLIPQ9H0E2 274 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 Q9N2K0 584 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 PLEKHJ1Q9NW61 149 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 JPT1Q9UK76 154 aa6.61□□□□□ -1.35
NEK3-209ENST00000618856 A0A0B4J203 849 aa6.6□□□□□ -1.35
NEK3-209ENST00000618856 SLC31A2O15432 143 aa6.6□□□□□ -1.35
NEK3-209ENST00000618856 DIRAS3O95661 229 aa6.6□□□□□ -1.35
NEK3-209ENST00000618856 IGHV3-7P01780 117 aa6.6□□□□□ -1.35
NEK3-209ENST00000618856 AMY1AP04745 511 aa6.6□□□□□ -1.35
NEK3-209ENST00000618856 AMY2AP04746 511 aa6.6□□□□□ -1.35
NEK3-209ENST00000618856 CLEC2LP0C7M8 214 aa6.6□□□□□ -1.35
NEK3-209ENST00000618856 BRS3P32247 399 aa6.6□□□□□ -1.35
NEK3-209ENST00000618856 LTC4SQ16873 150 aa6.6□□□□□ -1.35
NEK3-209ENST00000618856 TIMM50Q3ZCQ8 353 aa6.6□□□□□ -1.35
NEK3-209ENST00000618856 C11orf88Q6PI97 169 aa6.6□□□□□ -1.35
NEK3-209ENST00000618856 ODF3L1Q8IXM7 274 aa6.6□□□□□ -1.35
NEK3-209ENST00000618856 Q8N6K4 173 aa6.6□□□□□ -1.35
NEK3-209ENST00000618856 DTX3Q8N9I9 347 aa6.6□□□□□ -1.35
NEK3-209ENST00000618856 UBALD1Q8TB05 177 aa6.6□□□□□ -1.35
NEK3-209ENST00000618856 RTN4IP1Q8WWV3 396 aaPredicted RBP6.6□□□□□ -1.35
NEK3-209ENST00000618856 RAB3CQ96E17 227 aa6.6□□□□□ -1.35
NEK3-209ENST00000618856 RBM14Q96PK6 669 aaKnown RBP6.6□□□□□ -1.35
NEK3-209ENST00000618856 AGMATQ9BSE5 352 aa6.6□□□□□ -1.35
NEK3-209ENST00000618856 HDHD3Q9BSH5 251 aaPredicted RBP6.6□□□□□ -1.35
NEK3-209ENST00000618856 ZNF702PQ9H963 129 aa6.6□□□□□ -1.35
NEK3-209ENST00000618856 C12orf4Q9NQ89 552 aa6.6□□□□□ -1.35
NEK3-209ENST00000618856 ABCB10Q9NRK6 738 aa6.6□□□□□ -1.35
NEK3-209ENST00000618856 SERTAD4Q9NUC0 356 aa6.6□□□□□ -1.35
NEK3-209ENST00000618856 KCNIP1Q9NZI2 227 aa6.6□□□□□ -1.35
NEK3-209ENST00000618856 MGAT4AQ9UM21 535 aa6.6□□□□□ -1.35
NEK3-209ENST00000618856 RNF114Q9Y508 228 aa6.6□□□□□ -1.35
NEK3-209ENST00000618856 MGAM2Q2M2H8 2515 aa6.59□□□□□ -1.35
NEK3-209ENST00000618856 IGHV3-43A0A0B4J1X8 118 aa6.59□□□□□ -1.35
NEK3-209ENST00000618856 IGHV1-3A0A0C4DH29 117 aa6.59□□□□□ -1.35
NEK3-209ENST00000618856 IGKV1-6A0A0C4DH72 117 aa6.59□□□□□ -1.35
NEK3-209ENST00000618856 LOC100506127A0A0U1RQW1 187 aa6.59□□□□□ -1.35
NEK3-209ENST00000618856 A0A1W2PPE3 182 aa6.59□□□□□ -1.35
NEK3-209ENST00000618856 METTL21EPA6NDL7 271 aa6.59□□□□□ -1.35
NEK3-209ENST00000618856 SERPINE3A8MV23 424 aa6.59□□□□□ -1.35
NEK3-209ENST00000618856 LCE2BO14633 110 aa6.59□□□□□ -1.35
NEK3-209ENST00000618856 HSD17B6O14756 317 aa6.59□□□□□ -1.35
NEK3-209ENST00000618856 TIMM23O14925 209 aa6.59□□□□□ -1.35
NEK3-209ENST00000618856 TXNL1O43396 289 aa6.59□□□□□ -1.35
NEK3-209ENST00000618856 AIREO43918 545 aa6.59□□□□□ -1.35
NEK3-209ENST00000618856 OR2F2O95006 317 aa6.59□□□□□ -1.35
NEK3-209ENST00000618856 GAPDHP04406 335 aaKnown RBP6.59□□□□□ -1.35
NEK3-209ENST00000618856 IGHV3-43DP0DP04 118 aa6.59□□□□□ -1.35
NEK3-209ENST00000618856 HIST1H1DP16402 221 aaKnown RBP6.59□□□□□ -1.35
NEK3-209ENST00000618856 TGFBR1P36897 503 aa6.59□□□□□ -1.35
NEK3-209ENST00000618856 RPS19P39019 145 aaKnown RBP6.59□□□□□ -1.35
NEK3-209ENST00000618856 MNDAP41218 407 aa6.59□□□□□ -1.35
NEK3-209ENST00000618856 ALDH3B2P48448 385 aa6.59□□□□□ -1.35
NEK3-209ENST00000618856 GNG10P50151 68 aa6.59□□□□□ -1.35
NEK3-209ENST00000618856 ARHGDIBP52566 201 aa6.59□□□□□ -1.35
NEK3-209ENST00000618856 HLA-DRB3P79483 266 aa6.59□□□□□ -1.35
NEK3-209ENST00000618856 GNMTQ14749 295 aa6.59□□□□□ -1.35
NEK3-209ENST00000618856 ARL6IP1Q15041 203 aa6.59□□□□□ -1.35
NEK3-209ENST00000618856 PLA1AQ53H76 456 aa6.59□□□□□ -1.35
NEK3-209ENST00000618856 FAM71F2Q6NXP2 309 aa6.59□□□□□ -1.35
NEK3-209ENST00000618856 TMEM219Q86XT9 240 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms