RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 PPTC7Q8NI37 304 aa3□□□□□ -1.93
SMC5-204ENST00000618375 KCNG3Q8TAE7 436 aa3□□□□□ -1.93
SMC5-204ENST00000618375 OR51E1Q8TCB6 317 aa3□□□□□ -1.93
SMC5-204ENST00000618375 MARCH1Q8TCQ1 289 aa3□□□□□ -1.93
SMC5-204ENST00000618375 C2orf15Q8WU43 125 aaKnown RBP3□□□□□ -1.93
SMC5-204ENST00000618375 TMEM37Q8WXS4 190 aa3□□□□□ -1.93
SMC5-204ENST00000618375 APOBEC3DQ96AK3 386 aaPredicted RBP3□□□□□ -1.93
SMC5-204ENST00000618375 GNPNAT1Q96EK6 184 aaPredicted RBP3□□□□□ -1.93
SMC5-204ENST00000618375 DYNLL2Q96FJ2 89 aa3□□□□□ -1.93
SMC5-204ENST00000618375 PCED1BQ96HM7 432 aa3□□□□□ -1.93
SMC5-204ENST00000618375 KCNS1Q96KK3 526 aa3□□□□□ -1.93
SMC5-204ENST00000618375 DNAJC30Q96LL9 226 aa3□□□□□ -1.93
SMC5-204ENST00000618375 VSTM2LQ96N03 204 aa3□□□□□ -1.93
SMC5-204ENST00000618375 AP1S3Q96PC3 154 aa3□□□□□ -1.93
SMC5-204ENST00000618375 TRIB1Q96RU8 372 aa3□□□□□ -1.93
SMC5-204ENST00000618375 ANAPC13Q9BS18 74 aa3□□□□□ -1.93
SMC5-204ENST00000618375 PIMREGQ9BSJ6 248 aa3□□□□□ -1.93
SMC5-204ENST00000618375 NDFIP1Q9BT67 221 aa3□□□□□ -1.93
SMC5-204ENST00000618375 SAMD10Q9BYL1 202 aa3□□□□□ -1.93
SMC5-204ENST00000618375 VN1R1Q9GZP7 353 aa3□□□□□ -1.93
SMC5-204ENST00000618375 COA1Q9GZY4 146 aa3□□□□□ -1.93
SMC5-204ENST00000618375 NXF5Q9H1B4 397 aaKnown RBP3□□□□□ -1.93
SMC5-204ENST00000618375 IFI27L2Q9H2X8 130 aa3□□□□□ -1.93
SMC5-204ENST00000618375 MS4A5Q9H3V2 200 aa3□□□□□ -1.93
SMC5-204ENST00000618375 GPR84Q9NQS5 396 aa3□□□□□ -1.93
SMC5-204ENST00000618375 NECAP2Q9NVZ3 263 aa3□□□□□ -1.93
SMC5-204ENST00000618375 MARCH4Q9P2E8 410 aaPredicted RBP3□□□□□ -1.93
SMC5-204ENST00000618375 AK3Q9UIJ7 227 aa3□□□□□ -1.93
SMC5-204ENST00000618375 SH2B3Q9UQQ2 575 aa3□□□□□ -1.93
SMC5-204ENST00000618375 VDAC3Q9Y277 283 aa3□□□□□ -1.93
SMC5-204ENST00000618375 ZNF443Q9Y2A4 671 aaPredicted RBP3□□□□□ -1.93
SMC5-204ENST00000618375 NSG2Q9Y328 171 aa3□□□□□ -1.93
SMC5-204ENST00000618375 OARD1Q9Y530 152 aa3□□□□□ -1.93
SMC5-204ENST00000618375 LIPGQ9Y5X9 500 aa3□□□□□ -1.93
SMC5-204ENST00000618375 ZNF780BQ9Y6R6 833 aa3□□□□□ -1.93
SMC5-204ENST00000618375 UBR3Q6ZT12 1888 aa3□□□□□ -1.93
SMC5-204ENST00000618375 XIRP1Q702N8 1843 aaKnown RBP3□□□□□ -1.93
SMC5-204ENST00000618375 MYO18AQ92614 2054 aaKnown RBP2.99□□□□□ -1.93
SMC5-204ENST00000618375 ZNF831Q5JPB2 1677 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 THSD7AQ9UPZ6 1657 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 NUP98P52948 1817 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 TRBV5-5A0A0J9YX44 114 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 C7orf71A4D174 169 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 TMEM8BA6NDV4 472 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 DPRXA6NFQ7 191 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 WIPF3A6NGB9 483 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 ZNF732B4DXR9 585 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 C21orf140B9A014 251 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 H0YJW9 148 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 TMEM250H0YL14 139 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 H7C1C5 153 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 IFNL4K9M1U5 179 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 OVOL3O00110 214 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 CDC42EP2O14613 210 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 XRCC2O43543 280 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 SYNGR3O43761 229 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 PITX3O75364 302 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 CEACAM4O75871 244 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 MPZL1O95297 269 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 KRASP01116 189 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 CATP04040 527 aaKnown RBP2.99□□□□□ -1.93
SMC5-204ENST00000618375 GPX1P07203 203 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 ADH4P08319 380 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 ZNF728P0DKX0 622 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 IRF1P10914 325 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 EPORP19235 508 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 HIST1H1TP22492 207 aaPredicted RBP2.99□□□□□ -1.93
SMC5-204ENST00000618375 GATA3P23771 443 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 IL3RAP26951 378 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 AQP1P29972 269 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 OPRM1P35372 400 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 CDKN2AP42771 156 aaKnown RBP2.99□□□□□ -1.93
SMC5-204ENST00000618375 OR1D4P47884 311 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 MEOX1P50221 254 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 LHX2P50458 406 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 FOXG1P55316 489 aaPredicted RBP2.99□□□□□ -1.93
SMC5-204ENST00000618375 PAX9P55771 341 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 IL2P60568 153 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 RPL8P62917 257 aaKnown RBP2.99□□□□□ -1.93
SMC5-204ENST00000618375 HHEXQ03014 270 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 ROM1Q03395 351 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 ZNF85Q03923 595 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 ZNF117Q03924 483 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 FMODQ06828 376 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 FHL2Q14192 279 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 LY6DQ14210 128 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 OR1Q1Q15612 314 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 OR8B8Q15620 311 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 EFNB3Q15768 340 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 FAM162BQ5T6X4 162 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 CST9LP1Q5W188 147 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 ZFAND6Q6FIF0 208 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 NOXRED1Q6NXP6 359 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 ACSM6Q6P461 480 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 ZNF880Q6PDB4 577 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 Q6ZS92 163 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 LRP11Q86VZ4 500 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 HOGA1Q86XE5 327 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 SYT12Q8IV01 421 aa2.99□□□□□ -1.93
SMC5-204ENST00000618375 ZNF584Q8IVC4 421 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms