RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 TMEM78Q5T7P6 136 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 PLXND1Q9Y4D7 1925 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 FAM74A7A6NL05 159 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 DHRS7CA6NNS2 312 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 FAM157CP0CG43 387 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 PLAURQ03405 335 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 RAB24Q969Q5 203 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 OR4C46A6NHA9 309 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 INPP5JQ15735 1006 aaPredicted RBP9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 ADIPOQQ15848 244 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 CTF1Q16619 201 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 FAM53AQ6NSI3 398 aaPredicted RBP9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 PRSS50Q9UI38 385 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 IL9P15248 144 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 IGFBP6P24592 240 aaPredicted RBP9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 DRD3P35462 400 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 C3AR1Q16581 482 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 GAPTQ8N292 157 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 HLA-DRB5Q30154 266 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 ZNF658BQ4V348 819 aaPredicted RBP9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 MRGPRFQ96AM1 343 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 GPR35Q9HC97 309 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 RNF224P0DH78 156 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 SRSF5Q13243 272 aaKnown RBP9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 GGTLC2Q14390 218 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 BSXQ3C1V8 233 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 LSMEM1Q8N8F7 131 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 TINAGQ9UJW2 476 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 TTRP02766 147 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 AESQ08117 197 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 GVQW1Q8N7I0 195 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 RAB33BQ9H082 229 aa9.79□□□□□ -0.84
CCDC144B-208ENST00000618081 PPIAL4EA0A075B759 164 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 PPIAL4DF5H284 164 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 PPIAL4FP0DN26 164 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 GPR6P46095 362 aaPredicted RBP9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 ZDHHC8Q9ULC8 765 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 MRPS16Q9Y3D3 137 aaKnown RBP9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 PPIAL4AQ9Y536 164 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 CTDSPLO15194 276 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 ATXN7O15265 892 aaPredicted RBP9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 LRRC75BQ2VPJ9 315 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 TSPO2Q5TGU0 170 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 MRAP2Q96G30 205 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 LPAR5Q9H1C0 372 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 SLC52A3Q9NQ40 469 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 NOTCH3Q9UM47 2321 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 ELOA3CA0A087WX78 387 aaPredicted RBP9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 PF4V1P10720 104 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 DCAF10Q5QP82 559 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 LILRA6Q6PI73 481 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 ANKRD20A5PA0PJZ0 165 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 J3QT63 122 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 CT62P0C5K7 136 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 B2MP61769 119 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 GUCA2BQ16661 112 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 ZNF841Q6ZN19 808 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 BPIFA4PQ86YQ2 179 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 SMRP1Q8NCR6 262 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 DDB2Q92466 427 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 SCN10AQ9Y5Y9 1956 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 ADRA2AP08913 450 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 TMEM140Q9NV12 185 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 CIRBPQ14011 172 aaKnown RBP9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 FAM24BQ8N5W8 94 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 C17orf47Q8NEP4 570 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 PRDM14Q9GZV8 571 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 PITPNC1Q9UKF7 332 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 ZFP30Q9Y2G7 519 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 ABCA4P78363 2273 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 COL9A1P20849 921 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 TMEM255AQ5JRV8 349 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 CBLN3Q6UW01 205 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 CHST5Q9GZS9 411 aa9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 ZNF256Q9Y2P7 627 aaPredicted RBP9.78□□□□□ -0.84
CCDC144B-208ENST00000618081 ZNF253O75346 499 aa9.77□□□□□ -0.84
CCDC144B-208ENST00000618081 S1PR2O95136 353 aa9.77□□□□□ -0.84
CCDC144B-208ENST00000618081 MEOX2P50222 304 aa9.77□□□□□ -0.84
CCDC144B-208ENST00000618081 COL10A1Q03692 680 aa9.77□□□□□ -0.84
CCDC144B-208ENST00000618081 C1orf53Q5VUE5 145 aa9.77□□□□□ -0.84
CCDC144B-208ENST00000618081 PAXXQ9BUH6 204 aa9.77□□□□□ -0.84
CCDC144B-208ENST00000618081 OR2J1Q9GZK6 312 aa9.77□□□□□ -0.84
CCDC144B-208ENST00000618081 SLIRPQ9GZT3 109 aaKnown RBP9.77□□□□□ -0.84
CCDC144B-208ENST00000618081 SLC6A13Q9NSD5 602 aa9.77□□□□□ -0.84
CCDC144B-208ENST00000618081 MC5RP33032 325 aa9.77□□□□□ -0.85
CCDC144B-208ENST00000618081 SH2D5Q6ZV89 423 aa9.77□□□□□ -0.85
CCDC144B-208ENST00000618081 OR5AU1Q8NGC0 362 aa9.77□□□□□ -0.85
CCDC144B-208ENST00000618081 RAB37Q96AX2 223 aa9.77□□□□□ -0.85
CCDC144B-208ENST00000618081 CCL19Q99731 98 aa9.77□□□□□ -0.85
CCDC144B-208ENST00000618081 COX6CP09669 75 aa9.77□□□□□ -0.85
CCDC144B-208ENST00000618081 WNT3P56703 355 aa9.77□□□□□ -0.85
CCDC144B-208ENST00000618081 RPS4XP62701 263 aaKnown RBP9.77□□□□□ -0.85
CCDC144B-208ENST00000618081 HERPUD1Q15011 391 aa9.77□□□□□ -0.85
CCDC144B-208ENST00000618081 P2RY6Q15077 328 aa9.77□□□□□ -0.85
CCDC144B-208ENST00000618081 ATG4DQ86TL0 474 aaPredicted RBP9.77□□□□□ -0.85
CCDC144B-208ENST00000618081 ZNF738Q8NE65 137 aa9.77□□□□□ -0.85
CCDC144B-208ENST00000618081 FRRS1LQ9P0K9 344 aa9.77□□□□□ -0.85
CCDC144B-208ENST00000618081 GAPDHP04406 335 aaKnown RBP9.77□□□□□ -0.85
CCDC144B-208ENST00000618081 GAB4Q2WGN9 574 aa9.77□□□□□ -0.85
CCDC144B-208ENST00000618081 TEX30Q5JUR7 227 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms