RNA–Protein interactions for RNA: ENST00000617451.4

PTPRF-216, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5 BASIC

Gene PTPRF, Length 1,129 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-216ENST00000617451 LSAMPQ13449 338 aa19.41■□□□□ 0.7
PTPRF-216ENST00000617451 RAB12Q6IQ22 244 aa19.41■□□□□ 0.7
PTPRF-216ENST00000617451 PRR18Q8N4B5 295 aa19.41■□□□□ 0.7
PTPRF-216ENST00000617451 UBE2E2Q96LR5 201 aa19.41■□□□□ 0.7
PTPRF-216ENST00000617451 KLK15Q9H2R5 256 aa19.41■□□□□ 0.7
PTPRF-216ENST00000617451 SORL1Q92673 2214 aa19.41■□□□□ 0.7
PTPRF-216ENST00000617451 TRAV8-7A0A075B6U6 113 aa19.4■□□□□ 0.7
PTPRF-216ENST00000617451 C3orf84H3BNL1 204 aa19.4■□□□□ 0.7
PTPRF-216ENST00000617451 LALBAP00709 142 aa19.4■□□□□ 0.7
PTPRF-216ENST00000617451 RCC1P18754 421 aaPredicted RBP19.4■□□□□ 0.7
PTPRF-216ENST00000617451 CHATP28329 748 aa19.4■□□□□ 0.7
PTPRF-216ENST00000617451 INSL3P51460 131 aa19.4■□□□□ 0.7
PTPRF-216ENST00000617451 TRAT1Q6PIZ9 186 aa19.4■□□□□ 0.7
PTPRF-216ENST00000617451 MUL1Q969V5 352 aa19.4■□□□□ 0.7
PTPRF-216ENST00000617451 GNB4Q9HAV0 340 aa19.4■□□□□ 0.7
PTPRF-216ENST00000617451 CKLFQ9UBR5 152 aa19.4■□□□□ 0.7
PTPRF-216ENST00000617451 I3L521 148 aa19.39■□□□□ 0.69
PTPRF-216ENST00000617451 OR8U8P0C7N1 319 aa19.39■□□□□ 0.69
PTPRF-216ENST00000617451 MYF6P23409 242 aa19.39■□□□□ 0.69
PTPRF-216ENST00000617451 RPS11P62280 158 aaKnown RBP eCLIP19.39■□□□□ 0.69
PTPRF-216ENST00000617451 RUNX1Q01196 453 aa19.39■□□□□ 0.69
PTPRF-216ENST00000617451 MMDQ15546 238 aa19.39■□□□□ 0.69
PTPRF-216ENST00000617451 MORN2Q502X0 79 aa19.39■□□□□ 0.69
PTPRF-216ENST00000617451 ASPHD1Q5U4P2 390 aa19.39■□□□□ 0.69
PTPRF-216ENST00000617451 DMKNQ6E0U4 476 aaPredicted RBP19.39■□□□□ 0.69
PTPRF-216ENST00000617451 TMEM65Q6PI78 240 aa19.39■□□□□ 0.69
PTPRF-216ENST00000617451 GLIPR1L1Q6UWM5 242 aa19.39■□□□□ 0.69
PTPRF-216ENST00000617451 ZNF491Q8N8L2 437 aa19.39■□□□□ 0.69
PTPRF-216ENST00000617451 OR1N2Q8NGR9 330 aa19.39■□□□□ 0.69
PTPRF-216ENST00000617451 MRPS28Q9Y2Q9 187 aaKnown RBP19.39■□□□□ 0.69
PTPRF-216ENST00000617451 PEX16Q9Y5Y5 336 aa19.39■□□□□ 0.69
PTPRF-216ENST00000617451 WSB1Q9Y6I7 421 aa19.39■□□□□ 0.69
PTPRF-216ENST00000617451 G3V318 75 aa19.38■□□□□ 0.69
PTPRF-216ENST00000617451 CA11O75493 328 aa19.38■□□□□ 0.69
PTPRF-216ENST00000617451 SC5DO75845 299 aa19.38■□□□□ 0.69
PTPRF-216ENST00000617451 FSTP19883 344 aa19.38■□□□□ 0.69
PTPRF-216ENST00000617451 ADARB1P78563 741 aaKnown RBP19.38■□□□□ 0.69
PTPRF-216ENST00000617451 Q499Y3 187 aa19.38■□□□□ 0.69
PTPRF-216ENST00000617451 YIF1BQ5BJH7 314 aa19.38■□□□□ 0.69
PTPRF-216ENST00000617451 RITA1Q96K30 269 aa19.38■□□□□ 0.69
PTPRF-216ENST00000617451 TAF9BQ9HBM6 251 aa19.38■□□□□ 0.69
PTPRF-216ENST00000617451 OR2S2Q9NQN1 319 aa19.38■□□□□ 0.69
PTPRF-216ENST00000617451 CLEC2DQ9UHP7 191 aa19.38■□□□□ 0.69
PTPRF-216ENST00000617451 VSIG4Q9Y279 399 aa19.38■□□□□ 0.69
PTPRF-216ENST00000617451 IGLV1-40P01703 118 aa19.37■□□□□ 0.69
PTPRF-216ENST00000617451 ACTBP60709 375 aa19.37■□□□□ 0.69
PTPRF-216ENST00000617451 ZNF616Q08AN1 781 aa19.37■□□□□ 0.69
PTPRF-216ENST00000617451 C10orf67Q8IYJ2 551 aa19.37■□□□□ 0.69
PTPRF-216ENST00000617451 JAGN1Q8N5M9 183 aa19.37■□□□□ 0.69
PTPRF-216ENST00000617451 RDH12Q96NR8 316 aa19.37■□□□□ 0.69
PTPRF-216ENST00000617451 OR51J1Q9H342 316 aa19.37■□□□□ 0.69
PTPRF-216ENST00000617451 MBNL3Q9NUK0 354 aaKnown RBP19.37■□□□□ 0.69
PTPRF-216ENST00000617451 DIMT1Q9UNQ2 313 aaKnown RBP19.37■□□□□ 0.69
PTPRF-216ENST00000617451 SMAD5-AS1Q9Y6J3 95 aa19.37■□□□□ 0.69
PTPRF-216ENST00000617451 RYR2Q92736 4967 aa19.36■□□□□ 0.69
PTPRF-216ENST00000617451 TRBV5-7A0A0A0MS05 114 aa19.36■□□□□ 0.69
PTPRF-216ENST00000617451 IRGMA1A4Y4 181 aa19.36■□□□□ 0.69
PTPRF-216ENST00000617451 FAM90A10PA6NDY2 464 aa19.36■□□□□ 0.69
PTPRF-216ENST00000617451 FAM90A7PA6NKC0 464 aa19.36■□□□□ 0.69
PTPRF-216ENST00000617451 FAM90A23PA8MXZ1 464 aa19.36■□□□□ 0.69
PTPRF-216ENST00000617451 HLA-DRB1P01911 266 aa19.36■□□□□ 0.69
PTPRF-216ENST00000617451 GLAP06280 429 aa19.36■□□□□ 0.69
PTPRF-216ENST00000617451 MYL12AP19105 171 aa19.36■□□□□ 0.69
PTPRF-216ENST00000617451 GNB1P62873 340 aa19.36■□□□□ 0.69
PTPRF-216ENST00000617451 ODF3L1Q8IXM7 274 aa19.36■□□□□ 0.69
PTPRF-216ENST00000617451 PGLYRP3Q96LB9 341 aa19.36■□□□□ 0.69
PTPRF-216ENST00000617451 ABHD14AQ9BUJ0 271 aa19.36■□□□□ 0.69
PTPRF-216ENST00000617451 SELENOIQ9C0D9 397 aa19.36■□□□□ 0.69
PTPRF-216ENST00000617451 BANF2Q9H503 90 aa19.36■□□□□ 0.69
PTPRF-216ENST00000617451 EXOSC1Q9Y3B2 195 aaKnown RBP19.36■□□□□ 0.69
PTPRF-216ENST00000617451 IGHV7-81A0A0B4J1V7 117 aa19.35■□□□□ 0.69
PTPRF-216ENST00000617451 ATP6V0E1O15342 81 aa19.35■□□□□ 0.69
PTPRF-216ENST00000617451 LY86O95711 162 aa19.35■□□□□ 0.69
PTPRF-216ENST00000617451 FUT3P21217 361 aa19.35■□□□□ 0.69
PTPRF-216ENST00000617451 CNTFRP26992 372 aa19.35■□□□□ 0.69
PTPRF-216ENST00000617451 GNMTQ14749 295 aa19.35■□□□□ 0.69
PTPRF-216ENST00000617451 AWAT2Q6E213 333 aa19.35■□□□□ 0.69
PTPRF-216ENST00000617451 SIGIRRQ6IA17 410 aa19.35■□□□□ 0.69
PTPRF-216ENST00000617451 ZNF554Q86TJ5 538 aa19.35■□□□□ 0.69
PTPRF-216ENST00000617451 CDH26Q8IXH8 852 aa19.35■□□□□ 0.69
PTPRF-216ENST00000617451 OR52L2PQ8NGH6 319 aa19.35■□□□□ 0.69
PTPRF-216ENST00000617451 CYYR1Q96J86 154 aa19.35■□□□□ 0.69
PTPRF-216ENST00000617451 OR5B12Q96R08 314 aa19.35■□□□□ 0.69
PTPRF-216ENST00000617451 MRPL20Q9BYC9 149 aaKnown RBP19.35■□□□□ 0.69
PTPRF-216ENST00000617451 S100A14Q9HCY8 104 aa19.35■□□□□ 0.69
PTPRF-216ENST00000617451 PARP11Q9NR21 331 aa19.35■□□□□ 0.69
PTPRF-216ENST00000617451 TRAV41A0A0B4J266 112 aa19.34■□□□□ 0.69
PTPRF-216ENST00000617451 A0A1W2PPK0 400 aa19.34■□□□□ 0.69
PTPRF-216ENST00000617451 MGMTP16455 207 aa19.34■□□□□ 0.69
PTPRF-216ENST00000617451 RAB9AP51151 201 aa19.34■□□□□ 0.69
PTPRF-216ENST00000617451 C5orf24Q7Z6I8 188 aa19.34■□□□□ 0.69
PTPRF-216ENST00000617451 ZNF429Q86V71 674 aa19.34■□□□□ 0.69
PTPRF-216ENST00000617451 LYPD6Q86Y78 171 aa19.34■□□□□ 0.69
PTPRF-216ENST00000617451 PQLC1Q8N2U9 271 aa19.34■□□□□ 0.69
PTPRF-216ENST00000617451 ZFP41Q8N8Y5 198 aa19.34■□□□□ 0.69
PTPRF-216ENST00000617451 ZNF485Q8NCK3 441 aa19.34■□□□□ 0.69
PTPRF-216ENST00000617451 ZNF555Q8NEP9 628 aa19.34■□□□□ 0.69
PTPRF-216ENST00000617451 Q96M66 194 aa19.34■□□□□ 0.69
PTPRF-216ENST00000617451 OR14A2Q96R54 314 aa19.34■□□□□ 0.69
PTPRF-216ENST00000617451 NABP2Q9BQ15 211 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms