RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 SONP18583 2426 aaKnown RBP12.73□□□□□ -0.37
PCDHGC3-204ENST00000617222 A0A087X0M5 115 aa12.73□□□□□ -0.37
PCDHGC3-204ENST00000617222 IGHV2-26A0A0B4J1V2 119 aa12.73□□□□□ -0.37
PCDHGC3-204ENST00000617222 IGKV1-6A0A0C4DH72 117 aa12.73□□□□□ -0.37
PCDHGC3-204ENST00000617222 A0A1B0GX30 115 aa12.73□□□□□ -0.37
PCDHGC3-204ENST00000617222 CD34P28906 385 aa12.73□□□□□ -0.37
PCDHGC3-204ENST00000617222 ETV6P41212 452 aa12.73□□□□□ -0.37
PCDHGC3-204ENST00000617222 UBE2E1P51965 193 aa12.73□□□□□ -0.37
PCDHGC3-204ENST00000617222 MRPS10P82664 201 aaKnown RBP12.73□□□□□ -0.37
PCDHGC3-204ENST00000617222 GNMTQ14749 295 aa12.73□□□□□ -0.37
PCDHGC3-204ENST00000617222 HERPUD1Q15011 391 aa12.73□□□□□ -0.37
PCDHGC3-204ENST00000617222 TMEM30BQ3MIR4 351 aa12.73□□□□□ -0.37
PCDHGC3-204ENST00000617222 PYDC2Q56P42 97 aa12.73□□□□□ -0.37
PCDHGC3-204ENST00000617222 IGSF11Q5DX21 431 aa12.73□□□□□ -0.37
PCDHGC3-204ENST00000617222 RUSC1-AS1Q66K80 236 aa12.73□□□□□ -0.37
PCDHGC3-204ENST00000617222 BRD3OSQ6XYD6 125 aa12.73□□□□□ -0.37
PCDHGC3-204ENST00000617222 SLC23A1Q9UHI7 598 aa12.73□□□□□ -0.37
PCDHGC3-204ENST00000617222 ANXA10Q9UJ72 324 aa12.73□□□□□ -0.37
PCDHGC3-204ENST00000617222 JPT1Q9UK76 154 aa12.73□□□□□ -0.37
PCDHGC3-204ENST00000617222 ANAPC10Q9UM13 185 aa12.73□□□□□ -0.37
PCDHGC3-204ENST00000617222 PSG11Q9UQ72 335 aa12.73□□□□□ -0.37
PCDHGC3-204ENST00000617222 A0A1W2PPE3 182 aa12.72□□□□□ -0.37
PCDHGC3-204ENST00000617222 GABARAPH6UMI1 98 aa12.72□□□□□ -0.37
PCDHGC3-204ENST00000617222 TOR1AO14656 332 aa12.72□□□□□ -0.37
PCDHGC3-204ENST00000617222 BET1O15155 118 aa12.72□□□□□ -0.37
PCDHGC3-204ENST00000617222 CTDSPLO15194 276 aa12.72□□□□□ -0.37
PCDHGC3-204ENST00000617222 HSPA12AO43301 675 aa12.72□□□□□ -0.37
PCDHGC3-204ENST00000617222 RBBP9O75884 186 aa12.72□□□□□ -0.37
PCDHGC3-204ENST00000617222 ARG1P05089 322 aa12.72□□□□□ -0.37
PCDHGC3-204ENST00000617222 PPP1CCP36873 323 aaKnown RBP12.72□□□□□ -0.37
PCDHGC3-204ENST00000617222 CEACAM6P40199 344 aa12.72□□□□□ -0.37
PCDHGC3-204ENST00000617222 GNG10P50151 68 aa12.72□□□□□ -0.37
PCDHGC3-204ENST00000617222 MORN2Q502X0 79 aa12.72□□□□□ -0.37
PCDHGC3-204ENST00000617222 STEAP3Q658P3 488 aa12.72□□□□□ -0.37
PCDHGC3-204ENST00000617222 OR11H6Q8NGC7 330 aa12.72□□□□□ -0.37
PCDHGC3-204ENST00000617222 OR9G1Q8NH87 305 aa12.72□□□□□ -0.37
PCDHGC3-204ENST00000617222 SNAPC3Q92966 411 aa12.72□□□□□ -0.37
PCDHGC3-204ENST00000617222 OR1A1Q9P1Q5 309 aa12.72□□□□□ -0.37
PCDHGC3-204ENST00000617222 KLK11Q9UBX7 282 aa12.72□□□□□ -0.37
PCDHGC3-204ENST00000617222 CDC42EP3Q9UKI2 254 aa12.72□□□□□ -0.37
PCDHGC3-204ENST00000617222 SOX21Q9Y651 276 aaPredicted RBP12.72□□□□□ -0.37
PCDHGC3-204ENST00000617222 J3QR06 171 aa12.71□□□□□ -0.37
PCDHGC3-204ENST00000617222 NPFFO15130 113 aa12.71□□□□□ -0.37
PCDHGC3-204ENST00000617222 YPEL1O60688 119 aa12.71□□□□□ -0.37
PCDHGC3-204ENST00000617222 CTXN2P0C2S0 81 aa12.71□□□□□ -0.37
PCDHGC3-204ENST00000617222 NAT1P18440 290 aa12.71□□□□□ -0.37
PCDHGC3-204ENST00000617222 ZBTB25P24278 435 aa12.71□□□□□ -0.37
PCDHGC3-204ENST00000617222 PTBP1P26599 531 aaKnown RBP eCLIP12.71□□□□□ -0.37
PCDHGC3-204ENST00000617222 PRRX1P54821 245 aa12.71□□□□□ -0.37
PCDHGC3-204ENST00000617222 ARPC4P59998 168 aa12.71□□□□□ -0.37
PCDHGC3-204ENST00000617222 ZNF79Q15937 498 aa12.71□□□□□ -0.37
PCDHGC3-204ENST00000617222 CHRFAM7AQ494W8 412 aa12.71□□□□□ -0.37
PCDHGC3-204ENST00000617222 ZNF626Q68DY1 528 aa12.71□□□□□ -0.37
PCDHGC3-204ENST00000617222 LYSMD2Q8IV50 215 aa12.71□□□□□ -0.37
PCDHGC3-204ENST00000617222 PIP4P2Q8N4L2 257 aa12.71□□□□□ -0.37
PCDHGC3-204ENST00000617222 SMIM4Q8WVI0 70 aa12.71□□□□□ -0.37
PCDHGC3-204ENST00000617222 YPEL2Q96QA6 119 aa12.71□□□□□ -0.37
PCDHGC3-204ENST00000617222 CABLES2Q9BTV7 478 aa12.71□□□□□ -0.37
PCDHGC3-204ENST00000617222 MS4A7Q9GZW8 240 aaPredicted RBP12.71□□□□□ -0.37
PCDHGC3-204ENST00000617222 ZNRD1Q9P1U0 126 aa12.71□□□□□ -0.37
PCDHGC3-204ENST00000617222 ZNF69Q9UC07 566 aa12.71□□□□□ -0.37
PCDHGC3-204ENST00000617222 MTFP1Q9UDX5 166 aa12.71□□□□□ -0.37
PCDHGC3-204ENST00000617222 ODF3BA8MYP8 253 aa12.7□□□□□ -0.38
PCDHGC3-204ENST00000617222 SLC31A2O15432 143 aa12.7□□□□□ -0.38
PCDHGC3-204ENST00000617222 GSTZ1O43708 216 aaPredicted RBP12.7□□□□□ -0.38
PCDHGC3-204ENST00000617222 RGS11O94810 467 aa12.7□□□□□ -0.38
PCDHGC3-204ENST00000617222 HLA-DMAP28067 261 aa12.7□□□□□ -0.38
PCDHGC3-204ENST00000617222 RCVRNP35243 200 aa12.7□□□□□ -0.38
PCDHGC3-204ENST00000617222 ZNF134P52741 427 aa12.7□□□□□ -0.38
PCDHGC3-204ENST00000617222 LGALS4P56470 323 aa12.7□□□□□ -0.38
PCDHGC3-204ENST00000617222 BPIFB3P59826 476 aa12.7□□□□□ -0.38
PCDHGC3-204ENST00000617222 Q3ZCU0 254 aa12.7□□□□□ -0.38
PCDHGC3-204ENST00000617222 LINC00299Q6ZSB3 139 aa12.7□□□□□ -0.38
PCDHGC3-204ENST00000617222 BCL6BQ8N143 479 aaPredicted RBP12.7□□□□□ -0.38
PCDHGC3-204ENST00000617222 OR10J5Q8NHC4 309 aa12.7□□□□□ -0.38
PCDHGC3-204ENST00000617222 ZNF596Q8TC21 504 aa12.7□□□□□ -0.38
PCDHGC3-204ENST00000617222 C22orf15Q8WYQ4 148 aa12.7□□□□□ -0.38
PCDHGC3-204ENST00000617222 GINS4Q9BRT9 223 aa12.7□□□□□ -0.38
PCDHGC3-204ENST00000617222 TRBV6-7A0A0A0MS04 114 aa12.69□□□□□ -0.38
PCDHGC3-204ENST00000617222 IGLV1-47P01700 117 aa12.69□□□□□ -0.38
PCDHGC3-204ENST00000617222 PMP2P02689 132 aa12.69□□□□□ -0.38
PCDHGC3-204ENST00000617222 SRD5A1P18405 259 aa12.69□□□□□ -0.38
PCDHGC3-204ENST00000617222 EPHA1P21709 976 aa12.69□□□□□ -0.38
PCDHGC3-204ENST00000617222 SAA4P35542 130 aa12.69□□□□□ -0.38
PCDHGC3-204ENST00000617222 OR3A3P47888 321 aa12.69□□□□□ -0.38
PCDHGC3-204ENST00000617222 RFX2P48378 723 aa12.69□□□□□ -0.38
PCDHGC3-204ENST00000617222 ZNF45Q02386 682 aa12.69□□□□□ -0.38
PCDHGC3-204ENST00000617222 MIDNQ504T8 468 aa12.69□□□□□ -0.38
PCDHGC3-204ENST00000617222 CT45A1Q5HYN5 189 aa12.69□□□□□ -0.38
PCDHGC3-204ENST00000617222 LHFPL4Q7Z7J7 247 aa12.69□□□□□ -0.38
PCDHGC3-204ENST00000617222 ZNF439Q8NDP4 499 aa12.69□□□□□ -0.38
PCDHGC3-204ENST00000617222 BEND2Q8NDZ0 799 aa12.69□□□□□ -0.38
PCDHGC3-204ENST00000617222 OR5AP2Q8NGF4 316 aa12.69□□□□□ -0.38
PCDHGC3-204ENST00000617222 OR4P4Q8NGL7 312 aa12.69□□□□□ -0.38
PCDHGC3-204ENST00000617222 CT45A3Q8NHU0 189 aa12.69□□□□□ -0.38
PCDHGC3-204ENST00000617222 THAP7Q9BT49 309 aaPredicted RBP12.69□□□□□ -0.38
PCDHGC3-204ENST00000617222 SRRQ9GZT4 340 aa12.69□□□□□ -0.38
PCDHGC3-204ENST00000617222 PARP12Q9H0J9 701 aaKnown RBP12.69□□□□□ -0.38
PCDHGC3-204ENST00000617222 NECAP2Q9NVZ3 263 aa12.69□□□□□ -0.38
PCDHGC3-204ENST00000617222 RDH8Q9NYR8 311 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms