RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 PPP1CCP36873 323 aaKnown RBP6.51□□□□□ -1.37
NEK3-207ENST00000617054 TMEM187Q14656 261 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 SURF2Q15527 256 aaPredicted RBP6.51□□□□□ -1.37
NEK3-207ENST00000617054 TESK1Q15569 626 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 OR2B11Q5JQS5 317 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 GGNBP1Q5YKI7 109 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 FIP1L1Q6UN15 594 aaKnown RBP6.51□□□□□ -1.37
NEK3-207ENST00000617054 ALKAL2Q6UX46 152 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 FAM90A1Q86YD7 464 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 SLC38A6Q8IZM9 456 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 OR52M1Q8NGK5 317 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 LEAP2Q969E1 77 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 RRNAD1Q96FB5 475 aaKnown RBP6.51□□□□□ -1.37
NEK3-207ENST00000617054 CCL13Q99616 98 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 GON7Q9BXV9 100 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 IFT22Q9H7X7 185 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 COQ3Q9NZJ6 369 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 KCNS2Q9ULS6 477 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 KCNIP3Q9Y2W7 256 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 USP9XQ93008 2570 aaPredicted RBP6.51□□□□□ -1.37
NEK3-207ENST00000617054 TRBV6-7A0A0A0MS04 114 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 C3orf85A0A1B0GTC6 90 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 PRSS44E7EML9 344 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 IGLV2-14P01704 120 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 CD8AP01732 235 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 HBZP02008 142 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 TUBG1P23258 451 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 PSMB6P28072 239 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 CD200P41217 278 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 KCNJ3P48549 501 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 TLE1Q04724 770 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 EXOSC2Q13868 293 aaKnown RBP6.51□□□□□ -1.37
NEK3-207ENST00000617054 ZNF880Q6PDB4 577 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 ZNF808Q8N4W9 903 aaPredicted RBP6.51□□□□□ -1.37
NEK3-207ENST00000617054 TUBG2Q9NRH3 451 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 GLS2Q9UI32 602 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 OR2W1Q9Y3N9 320 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 MSGN1A6NI15 193 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 ZG16O60844 167 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 TUSC2O75896 110 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 LY6HO94772 140 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 LMO1P25800 156 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 CHRNB4P30926 498 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 S100A11P31949 105 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 TMEM268Q5VZI3 342 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 BTNL3Q6UXE8 466 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 FAM216BQ8N7L0 139 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 SLC35G3Q8N808 338 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 OR4A4PQ8NGN8 299 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 DCUN1D4Q92564 292 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 ARL11Q969Q4 196 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 MSI2Q96DH6 328 aaKnown RBP6.51□□□□□ -1.37
NEK3-207ENST00000617054 RIMS4Q9H426 269 aaPredicted RBP6.51□□□□□ -1.37
NEK3-207ENST00000617054 SEPSECSQ9HD40 501 aaKnown RBP6.51□□□□□ -1.37
NEK3-207ENST00000617054 LSM5Q9Y4Y9 91 aaKnown RBP6.51□□□□□ -1.37
NEK3-207ENST00000617054 SPG11Q96JI7 2443 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 RAI1Q7Z5J4 1906 aaPredicted RBP6.5□□□□□ -1.37
NEK3-207ENST00000617054 A0A1B0GWJ7 208 aa6.5□□□□□ -1.37
NEK3-207ENST00000617054 A0A1W2PPE3 182 aa6.5□□□□□ -1.37
NEK3-207ENST00000617054 SHOXO15266 292 aa6.5□□□□□ -1.37
NEK3-207ENST00000617054 LHBP01229 141 aa6.5□□□□□ -1.37
NEK3-207ENST00000617054 EPHA1P21709 976 aa6.5□□□□□ -1.37
NEK3-207ENST00000617054 IL2RGP31785 369 aa6.5□□□□□ -1.37
NEK3-207ENST00000617054 RPS23P62266 143 aaKnown RBP6.5□□□□□ -1.37
NEK3-207ENST00000617054 H1FOOQ8IZA3 346 aaPredicted RBP6.5□□□□□ -1.37
NEK3-207ENST00000617054 NUP37Q8NFH4 326 aa6.5□□□□□ -1.37
NEK3-207ENST00000617054 THAP6Q8TBB0 222 aa6.5□□□□□ -1.37
NEK3-207ENST00000617054 ABHD14BQ96IU4 210 aa6.5□□□□□ -1.37
NEK3-207ENST00000617054 VRK1Q99986 396 aaPredicted RBP6.5□□□□□ -1.37
NEK3-207ENST00000617054 TRAF4Q9BUZ4 470 aaPredicted RBP6.5□□□□□ -1.37
NEK3-207ENST00000617054 RAB18Q9NP72 206 aa6.5□□□□□ -1.37
NEK3-207ENST00000617054 OR2S2Q9NQN1 319 aa6.5□□□□□ -1.37
NEK3-207ENST00000617054 UBE2J1Q9Y385 318 aaPredicted RBP6.5□□□□□ -1.37
NEK3-207ENST00000617054 TMEM30CPA0ZSE6 113 aa6.5□□□□□ -1.37
NEK3-207ENST00000617054 RNF222A6NCQ9 220 aa6.5□□□□□ -1.37
NEK3-207ENST00000617054 TUBAL3A6NHL2 446 aa6.5□□□□□ -1.37
NEK3-207ENST00000617054 C17orf100A8MU93 164 aa6.5□□□□□ -1.37
NEK3-207ENST00000617054 TMPRSS2O15393 492 aa6.5□□□□□ -1.37
NEK3-207ENST00000617054 ZNF737O75373 536 aa6.5□□□□□ -1.37
NEK3-207ENST00000617054 PGLYRP1O75594 196 aaPredicted RBP6.5□□□□□ -1.37
NEK3-207ENST00000617054 HLA-GP17693 338 aa6.5□□□□□ -1.37
NEK3-207ENST00000617054 GNLYP22749 145 aa6.5□□□□□ -1.37
NEK3-207ENST00000617054 ASCL1P50553 236 aa6.5□□□□□ -1.37
NEK3-207ENST00000617054 NCMAPQ5T1S8 102 aa6.5□□□□□ -1.37
NEK3-207ENST00000617054 Q6ZS49 121 aa6.5□□□□□ -1.37
NEK3-207ENST00000617054 C1orf174Q8IYL3 243 aa6.5□□□□□ -1.37
NEK3-207ENST00000617054 GALMQ96C23 342 aa6.5□□□□□ -1.37
NEK3-207ENST00000617054 MBNL3Q9NUK0 354 aaKnown RBP6.5□□□□□ -1.37
NEK3-207ENST00000617054 CISD1Q9NZ45 108 aaKnown RBP6.5□□□□□ -1.37
NEK3-207ENST00000617054 IL19Q9UHD0 177 aa6.5□□□□□ -1.37
NEK3-207ENST00000617054 ZNF462Q96JM2 2506 aa6.5□□□□□ -1.37
NEK3-207ENST00000617054 GPR31O00270 319 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 HEXAP06865 529 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 MDH2P40926 338 aaKnown RBP6.49□□□□□ -1.37
NEK3-207ENST00000617054 C3orf36Q3SXR2 165 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 ANGPTL6Q8NI99 470 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 PIK3IP1Q96FE7 263 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 DNTTIP1Q9H147 329 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 SAP30LQ9HAJ7 183 aa6.49□□□□□ -1.37
NEK3-207ENST00000617054 KCNIP1Q9NZI2 227 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms