RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 ABHD1Q96SE0 405 aa16.26■□□□□ 0.19
GABPB1-212ENST00000615671 TLNRD1Q9H1K6 362 aa16.26■□□□□ 0.19
GABPB1-212ENST00000615671 AKAP11Q9UKA4 1901 aa16.26■□□□□ 0.19
GABPB1-212ENST00000615671 TMEM183BQ1AE95 376 aa16.26■□□□□ 0.19
GABPB1-212ENST00000615671 PCMT1P22061 227 aa16.26■□□□□ 0.19
GABPB1-212ENST00000615671 PSG4Q00888 419 aa16.26■□□□□ 0.19
GABPB1-212ENST00000615671 TIMP4Q99727 224 aa16.26■□□□□ 0.19
GABPB1-212ENST00000615671 WDR54Q9H977 334 aa16.26■□□□□ 0.19
GABPB1-212ENST00000615671 SNX22Q96L94 193 aa16.26■□□□□ 0.19
GABPB1-212ENST00000615671 RSG1Q9BU20 258 aa16.26■□□□□ 0.19
GABPB1-212ENST00000615671 A0A1B0GU03 582 aa16.25■□□□□ 0.19
GABPB1-212ENST00000615671 DUXBA0A1W2PPF3 345 aa16.25■□□□□ 0.19
GABPB1-212ENST00000615671 SMPD2O60906 423 aa16.25■□□□□ 0.19
GABPB1-212ENST00000615671 DEDDO75618 318 aa16.25■□□□□ 0.19
GABPB1-212ENST00000615671 PLPPR5Q32ZL2 321 aa16.25■□□□□ 0.19
GABPB1-212ENST00000615671 TEPPQ6URK8 271 aa16.25■□□□□ 0.19
GABPB1-212ENST00000615671 LPAR3Q9UBY5 353 aa16.25■□□□□ 0.19
GABPB1-212ENST00000615671 ZDHHC8Q9ULC8 765 aa16.25■□□□□ 0.19
GABPB1-212ENST00000615671 RAB29O14966 203 aa16.25■□□□□ 0.19
GABPB1-212ENST00000615671 ZNF501Q96CX3 271 aaPredicted RBP16.25■□□□□ 0.19
GABPB1-212ENST00000615671 PGLYRP3Q96LB9 341 aa16.25■□□□□ 0.19
GABPB1-212ENST00000615671 PAXXQ9BUH6 204 aa16.25■□□□□ 0.19
GABPB1-212ENST00000615671 TRAV8-7A0A075B6U6 113 aa16.25■□□□□ 0.19
GABPB1-212ENST00000615671 IGHV3-35A0A0C4DH35 117 aa16.25■□□□□ 0.19
GABPB1-212ENST00000615671 P2RY1P47900 373 aa16.25■□□□□ 0.19
GABPB1-212ENST00000615671 C1orf53Q5VUE5 145 aa16.25■□□□□ 0.19
GABPB1-212ENST00000615671 OR4A5Q8NH83 315 aa16.25■□□□□ 0.19
GABPB1-212ENST00000615671 HMGCLL1Q8TB92 370 aa16.25■□□□□ 0.19
GABPB1-212ENST00000615671 WDR73Q6P4I2 378 aa16.25■□□□□ 0.19
GABPB1-212ENST00000615671 RPS4Y2Q8TD47 263 aa16.25■□□□□ 0.19
GABPB1-212ENST00000615671 KLHDC2Q9Y2U9 406 aa16.25■□□□□ 0.19
GABPB1-212ENST00000615671 COL22A1Q8NFW1 1626 aaPredicted RBP16.25■□□□□ 0.19
GABPB1-212ENST00000615671 PRSS8Q16651 343 aa16.24■□□□□ 0.19
GABPB1-212ENST00000615671 FAM214BQ7L5A3 538 aa16.24■□□□□ 0.19
GABPB1-212ENST00000615671 ASB13Q8WXK3 278 aa16.24■□□□□ 0.19
GABPB1-212ENST00000615671 PACRGQ96M98 296 aaPredicted RBP16.24■□□□□ 0.19
GABPB1-212ENST00000615671 GAPDHP04406 335 aaKnown RBP16.24■□□□□ 0.19
GABPB1-212ENST00000615671 IL36RNQ9UBH0 155 aa16.24■□□□□ 0.19
GABPB1-212ENST00000615671 TMEM262E9PQX1 116 aa16.24■□□□□ 0.19
GABPB1-212ENST00000615671 APCSP02743 223 aa16.24■□□□□ 0.19
GABPB1-212ENST00000615671 EWSR1Q01844 656 aaKnown RBP eCLIP16.24■□□□□ 0.19
GABPB1-212ENST00000615671 DDB2Q92466 427 aa16.24■□□□□ 0.19
GABPB1-212ENST00000615671 SLIRPQ9GZT3 109 aaKnown RBP16.24■□□□□ 0.19
GABPB1-212ENST00000615671 EFNB2P52799 333 aa16.24■□□□□ 0.19
GABPB1-212ENST00000615671 NCMAPQ5T1S8 102 aa16.24■□□□□ 0.19
GABPB1-212ENST00000615671 CLRN3Q8NCR9 226 aa16.24■□□□□ 0.19
GABPB1-212ENST00000615671 IGHV3-66A0A0C4DH42 116 aa16.24■□□□□ 0.19
GABPB1-212ENST00000615671 HBZP02008 142 aa16.24■□□□□ 0.19
GABPB1-212ENST00000615671 THY1P04216 161 aa16.24■□□□□ 0.19
GABPB1-212ENST00000615671 BSXQ3C1V8 233 aa16.24■□□□□ 0.19
GABPB1-212ENST00000615671 IGSF11Q5DX21 431 aa16.24■□□□□ 0.19
GABPB1-212ENST00000615671 TCTEX1D1Q8N7M0 179 aa16.24■□□□□ 0.19
GABPB1-212ENST00000615671 CEACAM18A8MTB9 384 aa16.23■□□□□ 0.19
GABPB1-212ENST00000615671 ZNF735P0CB33 412 aa16.23■□□□□ 0.19
GABPB1-212ENST00000615671 DLK1P80370 383 aa16.23■□□□□ 0.19
GABPB1-212ENST00000615671 SSX8Q7RTT4 187 aa16.23■□□□□ 0.19
GABPB1-212ENST00000615671 H3BTX0 84 aa16.23■□□□□ 0.19
GABPB1-212ENST00000615671 DLL1O00548 723 aa16.23■□□□□ 0.19
GABPB1-212ENST00000615671 hCG_38984A0A1B0GV85 526 aa16.23■□□□□ 0.19
GABPB1-212ENST00000615671 GPA33Q99795 319 aa16.23■□□□□ 0.19
GABPB1-212ENST00000615671 ZP3P21754 424 aa16.23■□□□□ 0.19
GABPB1-212ENST00000615671 LRRC75BQ2VPJ9 315 aa16.23■□□□□ 0.19
GABPB1-212ENST00000615671 DMKNQ6E0U4 476 aaPredicted RBP16.23■□□□□ 0.19
GABPB1-212ENST00000615671 FUT9Q9Y231 359 aa16.23■□□□□ 0.19
GABPB1-212ENST00000615671 IGF2P01344 180 aa16.22■□□□□ 0.19
GABPB1-212ENST00000615671 NMUP48645 174 aa16.22■□□□□ 0.19
GABPB1-212ENST00000615671 HERPUD1Q15011 391 aa16.22■□□□□ 0.19
GABPB1-212ENST00000615671 TMEM78Q5T7P6 136 aa16.22■□□□□ 0.19
GABPB1-212ENST00000615671 GPHA2Q96T91 129 aa16.22■□□□□ 0.19
GABPB1-212ENST00000615671 ZIC3O60481 467 aa16.22■□□□□ 0.19
GABPB1-212ENST00000615671 TUBA4BQ9H853 241 aa16.22■□□□□ 0.19
GABPB1-212ENST00000615671 TMEM229AB2RXF0 380 aa16.22■□□□□ 0.19
GABPB1-212ENST00000615671 FGF9P31371 208 aaPredicted RBP16.22■□□□□ 0.19
GABPB1-212ENST00000615671 FCGR2BP31994 310 aaPredicted RBP16.22■□□□□ 0.19
GABPB1-212ENST00000615671 RPL24P83731 157 aaKnown RBP16.22■□□□□ 0.19
GABPB1-212ENST00000615671 SLC25A42Q86VD7 318 aa16.22■□□□□ 0.19
GABPB1-212ENST00000615671 ZNF519Q8TB69 540 aa16.22■□□□□ 0.19
GABPB1-212ENST00000615671 FOXJ2Q9P0K8 574 aa16.22■□□□□ 0.19
GABPB1-212ENST00000615671 RFLNBQ8N5W9 214 aa16.22■□□□□ 0.19
GABPB1-212ENST00000615671 SSTR5P35346 364 aa16.22■□□□□ 0.19
GABPB1-212ENST00000615671 KLF9Q13886 244 aaPredicted RBP16.22■□□□□ 0.19
GABPB1-212ENST00000615671 MOSPD3O75425 235 aa16.21■□□□□ 0.19
GABPB1-212ENST00000615671 OR2H2O95918 312 aa16.21■□□□□ 0.19
GABPB1-212ENST00000615671 IGHV3-48P01763 117 aa16.21■□□□□ 0.19
GABPB1-212ENST00000615671 RPL27AP46776 148 aaKnown RBP16.21■□□□□ 0.19
GABPB1-212ENST00000615671 FAM53AQ6NSI3 398 aaPredicted RBP16.21■□□□□ 0.19
GABPB1-212ENST00000615671 UQCC3Q6UW78 93 aa16.21■□□□□ 0.19
GABPB1-212ENST00000615671 TMEM189A5PLL7 270 aa16.21■□□□□ 0.19
GABPB1-212ENST00000615671 CXorf1O96002 111 aa16.21■□□□□ 0.19
GABPB1-212ENST00000615671 HIST1H1BP16401 226 aaKnown RBP16.21■□□□□ 0.19
GABPB1-212ENST00000615671 ELOBQ15370 118 aa16.21■□□□□ 0.19
GABPB1-212ENST00000615671 ADIPOQQ15848 244 aa16.21■□□□□ 0.19
GABPB1-212ENST00000615671 SLC35E3Q7Z769 313 aa16.21■□□□□ 0.19
GABPB1-212ENST00000615671 OR2T10Q8NGZ9 312 aa16.21■□□□□ 0.19
GABPB1-212ENST00000615671 Q9N2K0 584 aa16.21■□□□□ 0.19
GABPB1-212ENST00000615671 ADAMTSL1Q8N6G6 1762 aa16.21■□□□□ 0.19
GABPB1-212ENST00000615671 PPIAL4CA0A0B4J2A2 164 aa16.21■□□□□ 0.19
GABPB1-212ENST00000615671 CORTO00230 105 aa16.21■□□□□ 0.19
GABPB1-212ENST00000615671 PPIAL4GP0DN37 164 aa16.21■□□□□ 0.19
GABPB1-212ENST00000615671 CTSSP25774 331 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms