RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 ZNF85Q03923 595 aa7.58□□□□□ -1.2
VPS11-206ENST00000614944 SRSF4Q08170 494 aaKnown RBP7.58□□□□□ -1.2
VPS11-206ENST00000614944 WIPI1Q5MNZ9 446 aaPredicted RBP7.58□□□□□ -1.2
VPS11-206ENST00000614944 PLCXD3Q63HM9 321 aa7.58□□□□□ -1.2
VPS11-206ENST00000614944 ZNF627Q7L945 461 aa7.58□□□□□ -1.2
VPS11-206ENST00000614944 BCDIN3DQ7Z5W3 292 aaKnown RBP7.58□□□□□ -1.2
VPS11-206ENST00000614944 SLC35F2Q8IXU6 374 aa7.58□□□□□ -1.2
VPS11-206ENST00000614944 GLMPQ8WWB7 406 aa7.58□□□□□ -1.2
VPS11-206ENST00000614944 SRXN1Q9BYN0 137 aa7.58□□□□□ -1.2
VPS11-206ENST00000614944 WDR76Q9H967 626 aa7.58□□□□□ -1.2
VPS11-206ENST00000614944 SLC17A5Q9NRA2 495 aa7.58□□□□□ -1.2
VPS11-206ENST00000614944 CYTL1Q9NRR1 136 aa7.58□□□□□ -1.2
VPS11-206ENST00000614944 MRPL27Q9P0M9 148 aaKnown RBP7.58□□□□□ -1.2
VPS11-206ENST00000614944 SLC45A2Q9UMX9 530 aa7.58□□□□□ -1.2
VPS11-206ENST00000614944 SHISA8B8ZZ34 492 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 H3BML4 177 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 ZNF43P17038 809 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 AKR1C4P17516 323 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 SULT1A2P50226 295 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 ASPHD2Q6ICH7 369 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 FAM71F2Q6NXP2 309 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 OR10D3Q8NH80 312 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 MS4A10Q96PG2 267 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 MAGEA5P43359 124 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 GABRA2P47869 451 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 GLIPR1P48060 266 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 COL10A1Q03692 680 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.57□□□□□ -1.2
VPS11-206ENST00000614944 ZIC4Q8N9L1 334 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 FER1L6-AS1Q8NA97 138 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 SUMF2Q8NBJ7 301 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 DAZAP1Q96EP5 407 aaKnown RBP7.57□□□□□ -1.2
VPS11-206ENST00000614944 MRAP2Q96G30 205 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 WDYHV1Q96HA8 205 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 CDH20Q9HBT6 801 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 UQCR10Q9UDW1 63 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 WDR87Q6ZQQ6 2873 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 TRGV5A0A0B4J1U4 118 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 A0A1W2PNR3 127 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 NKX2-6A6NCS4 301 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 TNFSF11O14788 317 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 PLPP2O43688 288 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 GPANK1O95872 356 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 ASCL1P50553 236 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 PLP1P60201 277 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 POU3F1Q03052 451 aaPredicted RBP7.57□□□□□ -1.2
VPS11-206ENST00000614944 PET117Q6UWS5 81 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 BATF2Q8N1L9 274 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 OTOSQ8NHW6 89 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 HES7Q9BYE0 225 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 OR2S2Q9NQN1 319 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 ABRACLQ9P1F3 81 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 KLK11Q9UBX7 282 aa7.57□□□□□ -1.2
VPS11-206ENST00000614944 SNAI2O43623 268 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 ZNF205O95201 554 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 ALOX5APP20292 161 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 ID4P47928 161 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 HINT1P49773 126 aaPredicted RBP7.56□□□□□ -1.2
VPS11-206ENST00000614944 TBR1Q16650 682 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 ZNF324BQ6AW86 544 aaPredicted RBP7.56□□□□□ -1.2
VPS11-206ENST00000614944 LRRC69Q6ZNQ3 347 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 GPX8Q8TED1 209 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 SEC22AQ96IW7 307 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 EAF1Q96JC9 268 aaPredicted RBP7.56□□□□□ -1.2
VPS11-206ENST00000614944 MED20Q9H944 212 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 ELL3Q9HB65 397 aaPredicted RBP7.56□□□□□ -1.2
VPS11-206ENST00000614944 TRAV25A0A0B4J276 109 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 DAPL1A0PJW8 107 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 C11orf98E9PRG8 122 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 RAB29O14966 203 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 CDS2O95674 445 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 ABHD16AO95870 558 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 TACSTD2P09758 323 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 HLA-DOBP13765 273 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 KITLGP21583 273 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 PAFAH1B2P68402 229 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 ARF1P84077 181 aaKnown RBP7.56□□□□□ -1.2
VPS11-206ENST00000614944 GUSBP1Q15486 140 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 Q6ZN92 141 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 RBMXL3Q8N7X1 1067 aaKnown RBP7.56□□□□□ -1.2
VPS11-206ENST00000614944 LYPD6BQ8NI32 183 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 CALHM2Q9HA72 323 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 TRIM36Q9NQ86 728 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 MCTS1Q9ULC4 181 aaKnown RBP7.56□□□□□ -1.2
VPS11-206ENST00000614944 A0A1B0GTI1 187 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 NPIPA3F8WFD2 350 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 H3BQ15 152 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 SFTPDP35247 375 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 SLC6A9P48067 706 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 DMKNQ6E0U4 476 aaPredicted RBP7.56□□□□□ -1.2
VPS11-206ENST00000614944 C17orf78Q8N4C9 275 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 SMIM20Q8N5G0 67 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 DCUN1D4Q92564 292 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 SARAFQ96BY9 339 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 SLC25A38Q96DW6 304 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 OR51B2Q9Y5P1 312 aa7.56□□□□□ -1.2
VPS11-206ENST00000614944 EIF1AYO14602 144 aaKnown RBP7.55□□□□□ -1.2
VPS11-206ENST00000614944 DUS4LO95620 317 aaKnown RBP7.55□□□□□ -1.2
VPS11-206ENST00000614944 SNRPBP14678 240 aaKnown RBP7.55□□□□□ -1.2
VPS11-206ENST00000614944 CTLA4P16410 223 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms