RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 PRAMEF6Q5VXH4 476 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 CPEB3Q8NE35 698 aaKnown RBP10.76□□□□□ -0.69
MSH6-213ENST00000614496 OR10G4Q8NGN3 311 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 OR10G9Q8NGN4 311 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 OR10G7Q8NGN6 311 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 CLN8Q9UBY8 286 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 SPTBN2O15020 2390 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 HSPB1P04792 205 aaKnown RBP10.76□□□□□ -0.69
MSH6-213ENST00000614496 UMODP07911 640 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 CD63P08962 238 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 OR8U8P0C7N1 319 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 SLC10A1Q14973 349 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 CEACAM21Q3KPI0 293 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 OR4A16Q8NH70 328 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 PINX1Q96BK5 328 aaKnown RBP10.76□□□□□ -0.69
MSH6-213ENST00000614496 GALMQ96C23 342 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 FAM173AQ9BQD7 235 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 PLA2G2EQ9NZK7 142 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 IGLV3-32A0A0A0MS00 114 aa10.75□□□□□ -0.69
MSH6-213ENST00000614496 SLC25A6P12236 298 aa10.75□□□□□ -0.69
MSH6-213ENST00000614496 CD46P15529 392 aa10.75□□□□□ -0.69
MSH6-213ENST00000614496 TPRX1Q8N7U7 411 aa10.75□□□□□ -0.69
MSH6-213ENST00000614496 MRGPRDQ8TDS7 321 aa10.75□□□□□ -0.69
MSH6-213ENST00000614496 OR4C12Q96R67 309 aa10.75□□□□□ -0.69
MSH6-213ENST00000614496 SERTAD4Q9NUC0 356 aa10.75□□□□□ -0.69
MSH6-213ENST00000614496 TAAR3PQ9P1P4 343 aa10.75□□□□□ -0.69
MSH6-213ENST00000614496 VAX2Q9UIW0 290 aa10.75□□□□□ -0.69
MSH6-213ENST00000614496 CXorf65A6NEN9 183 aa10.75□□□□□ -0.69
MSH6-213ENST00000614496 RSPO1Q2MKA7 263 aaPredicted RBP10.75□□□□□ -0.69
MSH6-213ENST00000614496 MRPL14Q6P1L8 145 aaKnown RBP10.75□□□□□ -0.69
MSH6-213ENST00000614496 OR5A2Q8NGI9 324 aa10.75□□□□□ -0.69
MSH6-213ENST00000614496 TMEM9BQ9NQ34 198 aa10.75□□□□□ -0.69
MSH6-213ENST00000614496 SIRT7Q9NRC8 400 aa10.75□□□□□ -0.69
MSH6-213ENST00000614496 DOCK11Q5JSL3 2073 aa10.75□□□□□ -0.69
MSH6-213ENST00000614496 A0A1B0GU03 582 aa10.75□□□□□ -0.69
MSH6-213ENST00000614496 MUC22E2RYF6 1773 aaPredicted RBP10.75□□□□□ -0.69
MSH6-213ENST00000614496 H0Y980 276 aa10.75□□□□□ -0.69
MSH6-213ENST00000614496 CRYAAP02489 173 aa10.75□□□□□ -0.69
MSH6-213ENST00000614496 CELA3AP09093 270 aa10.75□□□□□ -0.69
MSH6-213ENST00000614496 CEBPDP49716 269 aaPredicted RBP10.75□□□□□ -0.69
MSH6-213ENST00000614496 SPNS3Q6ZMD2 512 aa10.75□□□□□ -0.69
MSH6-213ENST00000614496 OR10A7Q8NGE5 316 aa10.75□□□□□ -0.69
MSH6-213ENST00000614496 POM121Q96HA1 1249 aa10.75□□□□□ -0.69
MSH6-213ENST00000614496 SAMD10Q9BYL1 202 aa10.75□□□□□ -0.69
MSH6-213ENST00000614496 TWSG1Q9GZX9 223 aa10.75□□□□□ -0.69
MSH6-213ENST00000614496 PLEKHA3Q9HB20 300 aa10.75□□□□□ -0.69
MSH6-213ENST00000614496 MTCH1Q9NZJ7 389 aa10.75□□□□□ -0.69
MSH6-213ENST00000614496 LYZL6O75951 148 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 CXCL1P09341 107 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 FGF5P12034 268 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 AGAP20933 346 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 PMS2P11Q13670 270 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 HIST3H3Q16695 136 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 ALKBH6Q3KRA9 238 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 C10orf91Q5T1B1 145 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 GFI1BQ5VTD9 330 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 H1FOOQ8IZA3 346 aaPredicted RBP10.74□□□□□ -0.69
MSH6-213ENST00000614496 TMEM171Q8WVE6 324 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 IMMP1LQ96LU5 166 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 SMDT1Q9H4I9 107 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 DOCK10Q96BY6 2186 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 OPN1MWP04001 364 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 OPN1MW2P0DN77 364 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 OPN1MW3P0DN78 364 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 SELEP16581 610 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 CRYGSP22914 178 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 FOXG1P55316 489 aaPredicted RBP10.74□□□□□ -0.69
MSH6-213ENST00000614496 PNRC1Q12796 327 aaPredicted RBP10.74□□□□□ -0.69
MSH6-213ENST00000614496 ZNF705AQ6ZN79 300 aaPredicted RBP10.74□□□□□ -0.69
MSH6-213ENST00000614496 LRP11Q86VZ4 500 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 OR4D5Q8NGN0 318 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 GPR87Q9BY21 358 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 DLL3Q9NYJ7 618 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 KLRC4-KLRK1H3BQV0 150 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 DNPH1O43598 174 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 PAGE4O60829 102 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 MMP7P09237 267 aaPredicted RBP10.74□□□□□ -0.69
MSH6-213ENST00000614496 Q3ZCU0 254 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 C16orf82Q7Z2V1 217 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 PSG11Q9UQ72 335 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 FUT9Q9Y231 359 aa10.74□□□□□ -0.69
MSH6-213ENST00000614496 PTBP3O95758 552 aaKnown RBP10.73□□□□□ -0.69
MSH6-213ENST00000614496 ICAM4Q14773 271 aa10.73□□□□□ -0.69
MSH6-213ENST00000614496 MRGPRGQ86SM5 289 aa10.73□□□□□ -0.69
MSH6-213ENST00000614496 WFIKKN1Q96NZ8 548 aa10.73□□□□□ -0.69
MSH6-213ENST00000614496 TUBA4BQ9H853 241 aa10.73□□□□□ -0.69
MSH6-213ENST00000614496 TINAGQ9UJW2 476 aa10.73□□□□□ -0.69
MSH6-213ENST00000614496 ANAPC10Q9UM13 185 aa10.73□□□□□ -0.69
MSH6-213ENST00000614496 ARGFXA6NJG6 315 aa10.73□□□□□ -0.69
MSH6-213ENST00000614496 RHBDL1O75783 438 aa10.73□□□□□ -0.69
MSH6-213ENST00000614496 GLIPR1P48060 266 aa10.73□□□□□ -0.69
MSH6-213ENST00000614496 IL15RAQ13261 267 aa10.73□□□□□ -0.69
MSH6-213ENST00000614496 GAMTQ14353 236 aa10.73□□□□□ -0.69
MSH6-213ENST00000614496 FAM78BQ5VT40 261 aa10.73□□□□□ -0.69
MSH6-213ENST00000614496 DTX1Q86Y01 620 aa10.73□□□□□ -0.69
MSH6-213ENST00000614496 OR5D13Q8NGL4 314 aa10.73□□□□□ -0.69
MSH6-213ENST00000614496 MRPL30Q8TCC3 161 aaKnown RBP10.73□□□□□ -0.69
MSH6-213ENST00000614496 RBKSQ9H477 322 aa10.73□□□□□ -0.69
MSH6-213ENST00000614496 NAT8Q9UHE5 227 aa10.73□□□□□ -0.69
MSH6-213ENST00000614496 FOXD3Q9UJU5 478 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms