RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 PPOXP50336 477 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 EDDM3AQ14507 147 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 CR1LQ2VPA4 569 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 ANKRD55Q3KP44 614 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 LY6G6FQ5SQ64 297 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 DCAF12L2Q5VW00 463 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 ZNF788Q6ZQV5 615 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 TPRX1Q8N7U7 411 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 DEFB108BQ8NET1 73 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 MRGPRDQ8TDS7 321 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 SECTM1Q8WVN6 248 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 GALNT14Q96FL9 552 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 GAFA1Q96PS6 74 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 FAM234AQ9H0X4 552 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 DNTTIP1Q9H147 329 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 C7orf69Q9H7B7 122 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 NAA60Q9H7X0 242 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 DCAF16Q9NXF7 216 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 OR1A1Q9P1Q5 309 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 PPIAL4AQ9Y536 164 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 IGKV1D-13A0A0B4J2D9 117 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 IGHV1-69-2A0A0G2JMI3 117 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 ODAMA1E959 279 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 NKX6-3A6NJ46 265 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 SIGLEC5O15389 551 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 SPINT2O43291 252 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 IGKV1-13P0DP09 117 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 CEACAM6P40199 344 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 LUMP51884 338 aaPredicted RBP7.42□□□□□ -1.22
CCDC47-207ENST00000612558 P2RX3P56373 397 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 RND3P61587 244 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 SRSF4Q08170 494 aaKnown RBP7.42□□□□□ -1.22
CCDC47-207ENST00000612558 PHLDA2Q53GA4 152 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 LDLRAD3Q86YD5 345 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 CMTM1Q8IZ96 169 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 OR10V1Q8NGI7 309 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 OR13A1Q8NGR1 328 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 OR1L1Q8NH94 360 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 ARL11Q969Q4 196 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 BBC3Q96PG8 261 aaPredicted RBP7.42□□□□□ -1.22
CCDC47-207ENST00000612558 CCL13Q99616 98 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 VRK1Q99986 396 aaPredicted RBP7.42□□□□□ -1.22
CCDC47-207ENST00000612558 SUCNR1Q9BXA5 334 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 TOLLIPQ9H0E2 274 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 RAB18Q9NP72 206 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 CBLN4Q9NTU7 201 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 RDH8Q9NYR8 311 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 OR6C3Q9NZP0 311 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 SPTAN1Q13813 2472 aaKnown RBP7.41□□□□□ -1.22
CCDC47-207ENST00000612558 C15orf65H3BRN8 121 aa7.41□□□□□ -1.22
CCDC47-207ENST00000612558 MPPED1O15442 326 aa7.41□□□□□ -1.22
CCDC47-207ENST00000612558 SNAPC5O75971 98 aa7.41□□□□□ -1.22
CCDC47-207ENST00000612558 CD8AP01732 235 aa7.41□□□□□ -1.22
CCDC47-207ENST00000612558 IGFBP2P18065 325 aa7.41□□□□□ -1.22
CCDC47-207ENST00000612558 S100GP29377 79 aa7.41□□□□□ -1.22
CCDC47-207ENST00000612558 EDDM3BP56851 147 aa7.41□□□□□ -1.22
CCDC47-207ENST00000612558 TMEM187Q14656 261 aa7.41□□□□□ -1.22
CCDC47-207ENST00000612558 HFEQ30201 348 aa7.41□□□□□ -1.22
CCDC47-207ENST00000612558 Q5BKY6 102 aa7.41□□□□□ -1.22
CCDC47-207ENST00000612558 GSG1LQ6UXU4 331 aa7.41□□□□□ -1.22
CCDC47-207ENST00000612558 ZNF818PQ6ZRF7 136 aa7.41□□□□□ -1.22
CCDC47-207ENST00000612558 OR11H4Q8NGC9 324 aa7.41□□□□□ -1.22
CCDC47-207ENST00000612558 UBALD1Q8TB05 177 aa7.41□□□□□ -1.22
CCDC47-207ENST00000612558 NINJ1Q92982 152 aa7.41□□□□□ -1.22
CCDC47-207ENST00000612558 C14orf79Q96F83 325 aa7.41□□□□□ -1.22
CCDC47-207ENST00000612558 WDR89Q96FK6 387 aaPredicted RBP7.41□□□□□ -1.22
CCDC47-207ENST00000612558 PDCD10Q9BUL8 212 aa7.41□□□□□ -1.22
CCDC47-207ENST00000612558 RAB1BQ9H0U4 201 aa7.41□□□□□ -1.22
CCDC47-207ENST00000612558 RAB9BQ9NP90 201 aa7.41□□□□□ -1.22
CCDC47-207ENST00000612558 CCL28Q9NRJ3 127 aa7.41□□□□□ -1.22
CCDC47-207ENST00000612558 TANC2Q9HCD6 1990 aa7.41□□□□□ -1.22
CCDC47-207ENST00000612558 DSCAML1Q8TD84 2053 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 C3orf85A0A1B0GTC6 90 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 C5orf51A6NDU8 294 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 FAM25EA8MYX2 175 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 G3V3Q6 166 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 C19orf84I3L1E1 186 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 CCSO14618 274 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 HSD17B6O14756 317 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 TNFRSF13BO14836 293 aaPredicted RBP7.4□□□□□ -1.22
CCDC47-207ENST00000612558 TMPRSS2O15393 492 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 NDUFA2O43678 99 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 PRB1P04280 392 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 OR5AC1P0C628 307 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 SELLP14151 372 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 SSTR5P35346 364 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 HTD2P86397 168 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 CYCSP99999 105 aaKnown RBP7.4□□□□□ -1.22
CCDC47-207ENST00000612558 FGL1Q08830 312 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 C11orf71Q6IPW1 123 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 TBC1D26Q86UD7 250 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 ZNF843Q8N446 348 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 FAM216BQ8N7L0 139 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 LRTM2Q8N967 370 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 BVESQ8NE79 360 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 OR52L2PQ8NGH6 319 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 SEC22AQ96IW7 307 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 AKR1E2Q96JD6 320 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 DCTN5Q9BTE1 182 aa7.4□□□□□ -1.22
CCDC47-207ENST00000612558 METTL8Q9H825 291 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms