RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 ZDHHC22Q8N966 263 aa11.57□□□□□ -0.56
CTSA-211ENST00000606066 C8orf31Q8N9H6 132 aa11.57□□□□□ -0.56
CTSA-211ENST00000606066 OR4P4Q8NGL7 312 aa11.57□□□□□ -0.56
CTSA-211ENST00000606066 UBALD1Q8TB05 177 aa11.57□□□□□ -0.56
CTSA-211ENST00000606066 MMP28Q9H239 520 aa11.57□□□□□ -0.56
CTSA-211ENST00000606066 COMMD3Q9UBI1 195 aa11.57□□□□□ -0.56
CTSA-211ENST00000606066 JPT1Q9UK76 154 aa11.57□□□□□ -0.56
CTSA-211ENST00000606066 PSG11Q9UQ72 335 aa11.57□□□□□ -0.56
CTSA-211ENST00000606066 TENM1Q9UKZ4 2725 aa11.56□□□□□ -0.56
CTSA-211ENST00000606066 TRAV18A0A075B6X5 111 aa11.56□□□□□ -0.56
CTSA-211ENST00000606066 CCDC160A6NGH7 325 aa11.56□□□□□ -0.56
CTSA-211ENST00000606066 DNAJC9-AS1A6NH13 148 aa11.56□□□□□ -0.56
CTSA-211ENST00000606066 BUB1B-PAK6H3BSN5 160 aa11.56□□□□□ -0.56
CTSA-211ENST00000606066 MNDAP41218 407 aa11.56□□□□□ -0.56
CTSA-211ENST00000606066 KIR2DS4P43632 304 aa11.56□□□□□ -0.56
CTSA-211ENST00000606066 IER3P46695 156 aa11.56□□□□□ -0.56
CTSA-211ENST00000606066 GNG10P50151 68 aa11.56□□□□□ -0.56
CTSA-211ENST00000606066 GNG2P59768 71 aa11.56□□□□□ -0.56
CTSA-211ENST00000606066 UBA52P62987 128 aaKnown RBP11.56□□□□□ -0.56
CTSA-211ENST00000606066 HLA-DRB3P79483 266 aa11.56□□□□□ -0.56
CTSA-211ENST00000606066 SRSF2Q01130 221 aaKnown RBP11.56□□□□□ -0.56
CTSA-211ENST00000606066 KIR2DS1Q14954 304 aa11.56□□□□□ -0.56
CTSA-211ENST00000606066 SPCS2Q15005 226 aa11.56□□□□□ -0.56
CTSA-211ENST00000606066 SLC9A3R2Q15599 337 aa11.56□□□□□ -0.56
CTSA-211ENST00000606066 SSX2Q16385 188 aa11.56□□□□□ -0.56
CTSA-211ENST00000606066 SRSF7Q16629 238 aaKnown RBP eCLIP11.56□□□□□ -0.56
CTSA-211ENST00000606066 ZNF260Q3ZCT1 412 aa11.56□□□□□ -0.56
CTSA-211ENST00000606066 OR10X1Q8NGY0 326 aa11.56□□□□□ -0.56
CTSA-211ENST00000606066 OR5R1Q8NH85 324 aa11.56□□□□□ -0.56
CTSA-211ENST00000606066 C17orf50Q8WW18 174 aa11.56□□□□□ -0.56
CTSA-211ENST00000606066 IL1F10Q8WWZ1 152 aa11.56□□□□□ -0.56
CTSA-211ENST00000606066 LEAP2Q969E1 77 aa11.56□□□□□ -0.56
CTSA-211ENST00000606066 ISOC1Q96CN7 298 aa11.56□□□□□ -0.56
CTSA-211ENST00000606066 ESM1Q9NQ30 184 aa11.56□□□□□ -0.56
CTSA-211ENST00000606066 CEPT1Q9Y6K0 416 aa11.56□□□□□ -0.56
CTSA-211ENST00000606066 IGHV3-43A0A0B4J1X8 118 aa11.55□□□□□ -0.56
CTSA-211ENST00000606066 SMIM31A0A1B0GVY4 71 aa11.55□□□□□ -0.56
CTSA-211ENST00000606066 OOSP1A8MZH6 123 aa11.55□□□□□ -0.56
CTSA-211ENST00000606066 TRDCB7Z8K6 153 aa11.55□□□□□ -0.56
CTSA-211ENST00000606066 XRCC3O43542 346 aa11.55□□□□□ -0.56
CTSA-211ENST00000606066 IGHV3-7P01780 117 aa11.55□□□□□ -0.56
CTSA-211ENST00000606066 APOA1P02647 267 aa11.55□□□□□ -0.56
CTSA-211ENST00000606066 RNASE1P07998 156 aaKnown RBP11.55□□□□□ -0.56
CTSA-211ENST00000606066 FCGR3AP08637 254 aa11.55□□□□□ -0.56
CTSA-211ENST00000606066 IGHV3-43DP0DP04 118 aa11.55□□□□□ -0.56
CTSA-211ENST00000606066 DTYMKP23919 212 aa11.55□□□□□ -0.56
CTSA-211ENST00000606066 IL3RAP26951 378 aa11.55□□□□□ -0.56
CTSA-211ENST00000606066 MADCAM1Q13477 382 aa11.55□□□□□ -0.56
CTSA-211ENST00000606066 LRRC75BQ2VPJ9 315 aa11.55□□□□□ -0.56
CTSA-211ENST00000606066 CCDC144NLQ6NUI1 221 aa11.55□□□□□ -0.56
CTSA-211ENST00000606066 LINC00311Q8N616 119 aa11.55□□□□□ -0.56
CTSA-211ENST00000606066 FAM216AQ8WUB2 273 aa11.55□□□□□ -0.56
CTSA-211ENST00000606066 AJUBAQ96IF1 538 aa11.55□□□□□ -0.56
CTSA-211ENST00000606066 SSX3Q99909 188 aa11.55□□□□□ -0.56
CTSA-211ENST00000606066 OCSTAMPQ9BR26 566 aa11.55□□□□□ -0.56
CTSA-211ENST00000606066 ABCB10Q9NRK6 738 aa11.55□□□□□ -0.56
CTSA-211ENST00000606066 HILPDAQ9Y5L2 63 aa11.55□□□□□ -0.56
CTSA-211ENST00000606066 MEGF8Q7Z7M0 2845 aa11.54□□□□□ -0.56
CTSA-211ENST00000606066 TMEM235A6NFC5 223 aa11.54□□□□□ -0.56
CTSA-211ENST00000606066 VGLL3A8MV65 326 aa11.54□□□□□ -0.56
CTSA-211ENST00000606066 H3BMQ9 156 aa11.54□□□□□ -0.56
CTSA-211ENST00000606066 YPEL1O60688 119 aa11.54□□□□□ -0.56
CTSA-211ENST00000606066 IGHV4-59P01825 116 aa11.54□□□□□ -0.56
CTSA-211ENST00000606066 ZBTB25P24278 435 aa11.54□□□□□ -0.56
CTSA-211ENST00000606066 MORN2Q502X0 79 aa11.54□□□□□ -0.56
CTSA-211ENST00000606066 LY6G6FQ5SQ64 297 aa11.54□□□□□ -0.56
CTSA-211ENST00000606066 TMEM69Q5SWH9 247 aa11.54□□□□□ -0.56
CTSA-211ENST00000606066 TPTE2P1Q5T6R2 138 aa11.54□□□□□ -0.56
CTSA-211ENST00000606066 C16orf87Q6PH81 154 aa11.54□□□□□ -0.56
CTSA-211ENST00000606066 Q6ZPA2 131 aa11.54□□□□□ -0.56
CTSA-211ENST00000606066 OR52L2PQ8NGH6 319 aa11.54□□□□□ -0.56
CTSA-211ENST00000606066 OR10V1Q8NGI7 309 aa11.54□□□□□ -0.56
CTSA-211ENST00000606066 OR4A4PQ8NGN8 299 aa11.54□□□□□ -0.56
CTSA-211ENST00000606066 RPEQ96AT9 228 aa11.54□□□□□ -0.56
CTSA-211ENST00000606066 DUX5Q96PT3 197 aa11.54□□□□□ -0.56
CTSA-211ENST00000606066 YPEL2Q96QA6 119 aa11.54□□□□□ -0.56
CTSA-211ENST00000606066 LY6LH3BQJ8 138 aa11.53□□□□□ -0.56
CTSA-211ENST00000606066 H3BUX3 64 aa11.53□□□□□ -0.56
CTSA-211ENST00000606066 FABP7O15540 132 aa11.53□□□□□ -0.56
CTSA-211ENST00000606066 HSPA12AO43301 675 aa11.53□□□□□ -0.56
CTSA-211ENST00000606066 LPLP06858 475 aa11.53□□□□□ -0.56
CTSA-211ENST00000606066 SCTP09683 121 aa11.53□□□□□ -0.56
CTSA-211ENST00000606066 BRS3P32247 399 aa11.53□□□□□ -0.56
CTSA-211ENST00000606066 DYNLT3P51808 116 aa11.53□□□□□ -0.56
CTSA-211ENST00000606066 LDLRAD2Q5SZI1 272 aa11.53□□□□□ -0.56
CTSA-211ENST00000606066 UTF1Q5T230 341 aa11.53□□□□□ -0.56
CTSA-211ENST00000606066 Q6ZS49 121 aa11.53□□□□□ -0.56
CTSA-211ENST00000606066 SLC25A48Q6ZT89 311 aaKnown RBP11.53□□□□□ -0.56
CTSA-211ENST00000606066 OR2AK2Q8NG84 335 aa11.53□□□□□ -0.56
CTSA-211ENST00000606066 DYNC2LI1Q8TCX1 351 aa11.53□□□□□ -0.56
CTSA-211ENST00000606066 AUNIPQ9H7T9 357 aa11.53□□□□□ -0.56
CTSA-211ENST00000606066 TNFRSF19Q9NS68 423 aa11.53□□□□□ -0.56
CTSA-211ENST00000606066 CCDC59Q9P031 241 aaKnown RBP11.53□□□□□ -0.56
CTSA-211ENST00000606066 RSL24D1Q9UHA3 163 aaKnown RBP11.53□□□□□ -0.56
CTSA-211ENST00000606066 ELF5Q9UKW6 265 aaPredicted RBP11.53□□□□□ -0.56
CTSA-211ENST00000606066 DSCAML1Q8TD84 2053 aa11.53□□□□□ -0.56
CTSA-211ENST00000606066 A0A1W2PPE3 182 aa11.52□□□□□ -0.57
CTSA-211ENST00000606066 FAM25AB3EWG3 89 aa11.52□□□□□ -0.57
CTSA-211ENST00000606066 FAM25CB3EWG5 89 aa11.52□□□□□ -0.57
CTSA-211ENST00000606066 FAM25GB3EWG6 89 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms