RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 CD200R1LQ6Q8B3 271 aa11.53□□□□□ -0.56
TUBE1-208ENST00000604743 TREML4Q6UXN2 200 aa11.53□□□□□ -0.56
TUBE1-208ENST00000604743 Q6ZTK2 550 aa11.53□□□□□ -0.56
TUBE1-208ENST00000604743 OR52L2PQ8NGH6 319 aa11.53□□□□□ -0.56
TUBE1-208ENST00000604743 AKR1E2Q96JD6 320 aa11.53□□□□□ -0.56
TUBE1-208ENST00000604743 RBM14Q96PK6 669 aaKnown RBP11.53□□□□□ -0.56
TUBE1-208ENST00000604743 SERTAD4Q9NUC0 356 aa11.53□□□□□ -0.56
TUBE1-208ENST00000604743 STEAP1Q9UHE8 339 aa11.53□□□□□ -0.56
TUBE1-208ENST00000604743 MGAM2Q2M2H8 2515 aa11.53□□□□□ -0.56
TUBE1-208ENST00000604743 IGHV3-72A0A0B4J1Y9 119 aa11.52□□□□□ -0.57
TUBE1-208ENST00000604743 TMEM272A0A1B0GTI8 110 aa11.52□□□□□ -0.57
TUBE1-208ENST00000604743 OR2F2O95006 317 aa11.52□□□□□ -0.57
TUBE1-208ENST00000604743 GAPDHP04406 335 aaKnown RBP11.52□□□□□ -0.57
TUBE1-208ENST00000604743 RAB3BP20337 219 aa11.52□□□□□ -0.57
TUBE1-208ENST00000604743 IL3RAP26951 378 aa11.52□□□□□ -0.57
TUBE1-208ENST00000604743 VDAC2P45880 294 aaPredicted RBP11.52□□□□□ -0.57
TUBE1-208ENST00000604743 ZNF134P52741 427 aa11.52□□□□□ -0.57
TUBE1-208ENST00000604743 GNMTQ14749 295 aa11.52□□□□□ -0.57
TUBE1-208ENST00000604743 HERPUD1Q15011 391 aa11.52□□□□□ -0.57
TUBE1-208ENST00000604743 NEDD8Q15843 81 aa11.52□□□□□ -0.57
TUBE1-208ENST00000604743 ABCA11PQ4W5N1 156 aa11.52□□□□□ -0.57
TUBE1-208ENST00000604743 C9orf152Q5JTZ5 239 aa11.52□□□□□ -0.57
TUBE1-208ENST00000604743 C11orf88Q6PI97 169 aa11.52□□□□□ -0.57
TUBE1-208ENST00000604743 C16orf82Q7Z2V1 217 aa11.52□□□□□ -0.57
TUBE1-208ENST00000604743 LINC00311Q8N616 119 aa11.52□□□□□ -0.57
TUBE1-208ENST00000604743 OCSTAMPQ9BR26 566 aa11.52□□□□□ -0.57
TUBE1-208ENST00000604743 HDHD3Q9BSH5 251 aaPredicted RBP11.52□□□□□ -0.57
TUBE1-208ENST00000604743 LIN7BQ9HAP6 207 aa11.52□□□□□ -0.57
TUBE1-208ENST00000604743 MBNL3Q9NUK0 354 aaKnown RBP11.52□□□□□ -0.57
TUBE1-208ENST00000604743 TXNL4BQ9NX01 149 aaKnown RBP11.52□□□□□ -0.57
TUBE1-208ENST00000604743 AK3Q9UIJ7 227 aa11.52□□□□□ -0.57
TUBE1-208ENST00000604743 A0A0B4J203 849 aa11.51□□□□□ -0.57
TUBE1-208ENST00000604743 IGHV1-3A0A0C4DH29 117 aa11.51□□□□□ -0.57
TUBE1-208ENST00000604743 FAM90A9PA6NNJ1 464 aa11.51□□□□□ -0.57
TUBE1-208ENST00000604743 IGKV1D-33P01593 117 aa11.51□□□□□ -0.57
TUBE1-208ENST00000604743 IGKV1-33P01594 117 aa11.51□□□□□ -0.57
TUBE1-208ENST00000604743 TMEM11P17152 192 aa11.51□□□□□ -0.57
TUBE1-208ENST00000604743 PPP1CCP36873 323 aaKnown RBP11.51□□□□□ -0.57
TUBE1-208ENST00000604743 RANBP1P43487 201 aa11.51□□□□□ -0.57
TUBE1-208ENST00000604743 CT45A1Q5HYN5 189 aa11.51□□□□□ -0.57
TUBE1-208ENST00000604743 OR8H3Q8N146 312 aa11.51□□□□□ -0.57
TUBE1-208ENST00000604743 Q8N2B8 174 aa11.51□□□□□ -0.57
TUBE1-208ENST00000604743 FAM89BQ8N5H3 189 aa11.51□□□□□ -0.57
TUBE1-208ENST00000604743 CT45A3Q8NHU0 189 aa11.51□□□□□ -0.57
TUBE1-208ENST00000604743 IL1F10Q8WWZ1 152 aa11.51□□□□□ -0.57
TUBE1-208ENST00000604743 CFHR4Q92496 578 aa11.51□□□□□ -0.57
TUBE1-208ENST00000604743 ARHGAP5-AS1Q96IT6 56 aa11.51□□□□□ -0.57
TUBE1-208ENST00000604743 ABRACLQ9P1F3 81 aa11.51□□□□□ -0.57
TUBE1-208ENST00000604743 RAB22AQ9UL26 194 aa11.51□□□□□ -0.57
TUBE1-208ENST00000604743 STUB1Q9UNE7 303 aa11.51□□□□□ -0.57
TUBE1-208ENST00000604743 SSR3Q9UNL2 185 aa11.51□□□□□ -0.57
TUBE1-208ENST00000604743 IFITM5A6NNB3 132 aa11.5□□□□□ -0.57
TUBE1-208ENST00000604743 LPLP06858 475 aa11.5□□□□□ -0.57
TUBE1-208ENST00000604743 SLC2A2P11168 524 aaPredicted RBP11.5□□□□□ -0.57
TUBE1-208ENST00000604743 GALP22466 123 aa11.5□□□□□ -0.57
TUBE1-208ENST00000604743 TMEM50BP56557 158 aa11.5□□□□□ -0.57
TUBE1-208ENST00000604743 ZNF816Q0VGE8 651 aaPredicted RBP11.5□□□□□ -0.57
TUBE1-208ENST00000604743 HMGN3Q15651 99 aa11.5□□□□□ -0.57
TUBE1-208ENST00000604743 TMEM30BQ3MIR4 351 aa11.5□□□□□ -0.57
TUBE1-208ENST00000604743 MORN2Q502X0 79 aa11.5□□□□□ -0.57
TUBE1-208ENST00000604743 SLC25A48Q6ZT89 311 aaKnown RBP11.5□□□□□ -0.57
TUBE1-208ENST00000604743 THNSL2Q86YJ6 484 aa11.5□□□□□ -0.57
TUBE1-208ENST00000604743 LYG1Q8N1E2 194 aa11.5□□□□□ -0.57
TUBE1-208ENST00000604743 C8orf31Q8N9H6 132 aa11.5□□□□□ -0.57
TUBE1-208ENST00000604743 ZNF439Q8NDP4 499 aa11.5□□□□□ -0.57
TUBE1-208ENST00000604743 OR56B1Q8NGI3 324 aa11.5□□□□□ -0.57
TUBE1-208ENST00000604743 FAM110DQ8TAY7 271 aaPredicted RBP11.5□□□□□ -0.57
TUBE1-208ENST00000604743 RTN4IP1Q8WWV3 396 aaPredicted RBP11.5□□□□□ -0.57
TUBE1-208ENST00000604743 GALMQ96C23 342 aa11.5□□□□□ -0.57
TUBE1-208ENST00000604743 PECRQ9BY49 303 aa11.5□□□□□ -0.57
TUBE1-208ENST00000604743 OR51E2Q9H255 320 aa11.5□□□□□ -0.57
TUBE1-208ENST00000604743 VWFP04275 2813 aa11.5□□□□□ -0.57
TUBE1-208ENST00000604743 A0A075B6Q4 140 aa11.49□□□□□ -0.57
TUBE1-208ENST00000604743 FOXI3A8MTJ6 420 aaPredicted RBP11.49□□□□□ -0.57
TUBE1-208ENST00000604743 LDLRAD4O15165 306 aa11.49□□□□□ -0.57
TUBE1-208ENST00000604743 TSPAN15O95858 294 aa11.49□□□□□ -0.57
TUBE1-208ENST00000604743 NAPSAO96009 420 aa11.49□□□□□ -0.57
TUBE1-208ENST00000604743 CD28P10747 220 aa11.49□□□□□ -0.57
TUBE1-208ENST00000604743 Q3ZCU0 254 aa11.49□□□□□ -0.57
TUBE1-208ENST00000604743 KCTD21Q4G0X4 260 aa11.49□□□□□ -0.57
TUBE1-208ENST00000604743 Q6ZPA2 131 aa11.49□□□□□ -0.57
TUBE1-208ENST00000604743 ZNF554Q86TJ5 538 aa11.49□□□□□ -0.57
TUBE1-208ENST00000604743 NR2C2APQ86WQ0 139 aa11.49□□□□□ -0.57
TUBE1-208ENST00000604743 TGIF2LXQ8IUE1 241 aa11.49□□□□□ -0.57
TUBE1-208ENST00000604743 RBMXL1Q96E39 390 aaKnown RBP11.49□□□□□ -0.57
TUBE1-208ENST00000604743 CMSS1Q9BQ75 279 aaKnown RBP11.49□□□□□ -0.57
TUBE1-208ENST00000604743 CHCHD6Q9BRQ6 235 aa11.49□□□□□ -0.57
TUBE1-208ENST00000604743 JPT1Q9UK76 154 aa11.49□□□□□ -0.57
TUBE1-208ENST00000604743 HSF4Q9ULV5 492 aa11.49□□□□□ -0.57
TUBE1-208ENST00000604743 MOB4Q9Y3A3 225 aa11.49□□□□□ -0.57
TUBE1-208ENST00000604743 LOC100506127A0A0U1RQW1 187 aa11.48□□□□□ -0.57
TUBE1-208ENST00000604743 FBXO24O75426 580 aa11.48□□□□□ -0.57
TUBE1-208ENST00000604743 RGS11O94810 467 aa11.48□□□□□ -0.57
TUBE1-208ENST00000604743 AMY1AP04745 511 aa11.48□□□□□ -0.57
TUBE1-208ENST00000604743 AMY2AP04746 511 aa11.48□□□□□ -0.57
TUBE1-208ENST00000604743 CSF1P09603 554 aa11.48□□□□□ -0.57
TUBE1-208ENST00000604743 FGF9P31371 208 aaPredicted RBP11.48□□□□□ -0.57
TUBE1-208ENST00000604743 HTD2P86397 168 aa11.48□□□□□ -0.57
TUBE1-208ENST00000604743 C2orf68Q2NKX9 166 aa11.48□□□□□ -0.57
TUBE1-208ENST00000604743 NSUN5P1Q3KNT7 163 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms