RNA–Protein interactions for RNA: ENST00000604236.5

FGFR2-222, Transcript of fibroblast growth factor receptor 2, human

TSL 1 (best)

Gene FGFR2, Length 3,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR2-222	ENST00000604236		A0A1W2PRF3	423 aa		13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236		A0A1W2PRM7	423 aa		13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	IFNA10	P01566	189 aa		13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	CRIP3	Q6Q6R5	217 aa		13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236		Q6ZPA2	131 aa		13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	CISD2	Q8N5K1	135 aa	Known RBP	13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	CLRN3	Q8NCR9	226 aa		13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	RND1	Q92730	232 aa		13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	ZDHHC16	Q969W1	377 aa		13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	ADGRG7	Q96K78	797 aa		13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	WSB1	Q9Y6I7	421 aa		13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	RAMP3	O60896	148 aa		13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	FCGR3B	O75015	233 aa		13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	DEDD	O75618	318 aa		13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	DKK1	O94907	266 aa		13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	MMP7	P09237	267 aa	Predicted RBP	13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	PSG7	Q13046	419 aa		13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	HERPUD1	Q15011	391 aa		13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	NANOS1	Q8WY41	292 aa	Known RBP	13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	H1FX	Q92522	213 aa	Known RBP	13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	PSENEN	Q9NZ42	101 aa		13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236		B4E171	279 aa		13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	DNASE2	O00115	360 aa	Predicted RBP	13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	SLC25A4	P12235	298 aa		13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	TSPAN7	P41732	249 aa		13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	FOXC1	Q12948	553 aa		13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	NANP	Q8TBE9	248 aa		13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	ADAMTS17	Q8TE56	1095 aa		13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	LRRC29	Q8WV35	223 aa		13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	MARVELD3	Q96A59	401 aa		13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	HSF4	Q9ULV5	492 aa		13.1	□□□□□ -0.31
FGFR2-222	ENST00000604236	EXPH5	Q8NEV8	1989 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236		H7C1Q1	480 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	TRIM77	I1YAP6	450 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	IFNA4	P05014	189 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	LHFPL4	Q7Z7J7	247 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	VSIR	Q9H7M9	311 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	PLA2G2E	Q9NZK7	142 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	WNK1	Q9H4A3	2382 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	IGLV3-32	A0A0A0MS00	114 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	SPINK4	O60575	86 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	NDUFA6	P56556	154 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	CEACAM21	Q3KPI0	293 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	MOGAT3	Q86VF5	341 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	FAM89B	Q8N5H3	189 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	TMEM252	Q8N6L7	170 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	FAM117A	Q9C073	453 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	ZNF665	Q9H7R5	613 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	COL5A1	P20908	1838 aa	Predicted RBP	13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	ABCA12	Q86UK0	2595 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	EPG5	Q9HCE0	2579 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	IGKV1-6	A0A0C4DH72	117 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	AQP7	O14520	342 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	CRYAA	P02489	173 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	ARR3	P36575	388 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	FAM27E3	Q08E93	113 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	ADIRF	Q15847	76 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	FAM185A	Q8N0U4	392 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	C9orf106	Q8NAJ2	232 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	RTL8A	Q9BWD3	113 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	TMEM100	Q9NV29	134 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	MED9	Q9NWA0	146 aa		13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	ZNF107	Q9UII5	783 aa	Predicted RBP	13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	SPEN	Q96T58	3664 aa	Known RBP	13.09	□□□□□ -0.31
FGFR2-222	ENST00000604236	KIAA1549	Q9HCM3	1950 aa		13.08	□□□□□ -0.32
FGFR2-222	ENST00000604236	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.08	□□□□□ -0.32
FGFR2-222	ENST00000604236	TRAV24	A0A0B4J272	114 aa		13.08	□□□□□ -0.32
FGFR2-222	ENST00000604236	CLEC18A	A5D8T8	446 aa		13.08	□□□□□ -0.32
FGFR2-222	ENST00000604236	RPL36A-HNRNPH2	H7BZ11	118 aa		13.08	□□□□□ -0.32
FGFR2-222	ENST00000604236		K7EM74	188 aa		13.08	□□□□□ -0.32
FGFR2-222	ENST00000604236	PSPN	O60542	156 aa		13.08	□□□□□ -0.32
FGFR2-222	ENST00000604236	ACTL6B	O94805	426 aa		13.08	□□□□□ -0.32
FGFR2-222	ENST00000604236	RPS2	P15880	293 aa	Known RBP	13.08	□□□□□ -0.32
FGFR2-222	ENST00000604236	IGHV1-2	P23083	117 aa		13.08	□□□□□ -0.32
FGFR2-222	ENST00000604236	ACP1	P24666	158 aa		13.08	□□□□□ -0.32
FGFR2-222	ENST00000604236	PAX6	P26367	422 aa		13.08	□□□□□ -0.32
FGFR2-222	ENST00000604236		Q6ZRM9	215 aa		13.08	□□□□□ -0.32
FGFR2-222	ENST00000604236	CLEC18C	Q8NCF0	446 aa		13.08	□□□□□ -0.32
FGFR2-222	ENST00000604236	KLF14	Q8TD94	323 aa	Predicted RBP	13.08	□□□□□ -0.32
FGFR2-222	ENST00000604236	GPR146	Q96CH1	333 aa		13.08	□□□□□ -0.32
FGFR2-222	ENST00000604236	SNRNP40	Q96DI7	357 aa	Known RBP	13.08	□□□□□ -0.32
FGFR2-222	ENST00000604236	WFIKKN1	Q96NZ8	548 aa		13.08	□□□□□ -0.32
FGFR2-222	ENST00000604236	REPIN1	Q9BWE0	567 aa	Known RBP	13.08	□□□□□ -0.32
FGFR2-222	ENST00000604236	C7orf77	A4D0Y5	90 aa		13.08	□□□□□ -0.32
FGFR2-222	ENST00000604236	PGLYRP1	O75594	196 aa	Predicted RBP	13.08	□□□□□ -0.32
FGFR2-222	ENST00000604236	RBMS3	Q6XE24	437 aa	Known RBP	13.08	□□□□□ -0.32
FGFR2-222	ENST00000604236	FGFRL1	Q8N441	504 aa		13.08	□□□□□ -0.32
FGFR2-222	ENST00000604236	POM121L2	Q96KW2	1035 aa		13.08	□□□□□ -0.32
FGFR2-222	ENST00000604236	FAM122C	Q6P4D5	195 aa		13.08	□□□□□ -0.32
FGFR2-222	ENST00000604236	DCAF16	Q9NXF7	216 aa		13.08	□□□□□ -0.32
FGFR2-222	ENST00000604236	CHD3	Q12873	2000 aa	Known RBP	13.07	□□□□□ -0.32
FGFR2-222	ENST00000604236	IGHV3-21	A0A0B4J1V1	117 aa		13.07	□□□□□ -0.32
FGFR2-222	ENST00000604236	KIR2DS1	A0A191URI9	304 aa		13.07	□□□□□ -0.32
FGFR2-222	ENST00000604236	TRDC	B7Z8K6	153 aa		13.07	□□□□□ -0.32
FGFR2-222	ENST00000604236	TMEM50A	O95807	157 aa		13.07	□□□□□ -0.32
FGFR2-222	ENST00000604236	S100A9	P06702	114 aa	Known RBP	13.07	□□□□□ -0.32
FGFR2-222	ENST00000604236	KIR2DS4	P43632	304 aa		13.07	□□□□□ -0.32
FGFR2-222	ENST00000604236	KIR2DS1	Q14954	304 aa		13.07	□□□□□ -0.32
FGFR2-222	ENST00000604236	ZNF880	Q6PDB4	577 aa		13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms