RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 MAS1P04201 325 aa10.28□□□□□ -0.76
RPS28-204ENST00000602140 IGF1P05019 195 aa10.28□□□□□ -0.76
RPS28-204ENST00000602140 NHLRC4P0CG21 123 aaPredicted RBP10.28□□□□□ -0.76
RPS28-204ENST00000602140 SLC2A2P11168 524 aaPredicted RBP10.28□□□□□ -0.76
RPS28-204ENST00000602140 FSTP19883 344 aa10.28□□□□□ -0.76
RPS28-204ENST00000602140 MYF6P23409 242 aa10.28□□□□□ -0.76
RPS28-204ENST00000602140 PSMB8P28062 276 aa10.28□□□□□ -0.76
RPS28-204ENST00000602140 ECI1P42126 302 aa10.28□□□□□ -0.76
RPS28-204ENST00000602140 ADARB1P78563 741 aaKnown RBP10.28□□□□□ -0.76
RPS28-204ENST00000602140 LSAMPQ13449 338 aa10.28□□□□□ -0.76
RPS28-204ENST00000602140 TMEM30BQ3MIR4 351 aa10.28□□□□□ -0.76
RPS28-204ENST00000602140 STEAP3Q658P3 488 aa10.28□□□□□ -0.76
RPS28-204ENST00000602140 GAPTQ8N292 157 aa10.28□□□□□ -0.76
RPS28-204ENST00000602140 C4orf3Q8WVX3 66 aa10.28□□□□□ -0.76
RPS28-204ENST00000602140 TMEM80Q96HE8 168 aa10.28□□□□□ -0.76
RPS28-204ENST00000602140 CYYR1Q96J86 154 aa10.28□□□□□ -0.76
RPS28-204ENST00000602140 PGLYRP3Q96LB9 341 aa10.28□□□□□ -0.76
RPS28-204ENST00000602140 RDH12Q96NR8 316 aa10.28□□□□□ -0.76
RPS28-204ENST00000602140 OR14A2Q96R54 314 aa10.28□□□□□ -0.76
RPS28-204ENST00000602140 SELENOIQ9C0D9 397 aa10.28□□□□□ -0.76
RPS28-204ENST00000602140 OR2S2Q9NQN1 319 aa10.28□□□□□ -0.76
RPS28-204ENST00000602140 CHCHD3Q9NX63 227 aaKnown RBP10.28□□□□□ -0.76
RPS28-204ENST00000602140 ZNF107Q9UII5 783 aaPredicted RBP10.28□□□□□ -0.76
RPS28-204ENST00000602140 SCOCQ9UIL1 159 aa10.28□□□□□ -0.76
RPS28-204ENST00000602140 LSM4Q9Y4Z0 139 aaKnown RBP10.28□□□□□ -0.76
RPS28-204ENST00000602140 TRBV5-7A0A0A0MS05 114 aa10.27□□□□□ -0.77
RPS28-204ENST00000602140 PNMA8CA0A1B0GUJ8 204 aa10.27□□□□□ -0.77
RPS28-204ENST00000602140 UBE2QL1A1L167 161 aa10.27□□□□□ -0.77
RPS28-204ENST00000602140 LANCL1O43813 399 aa10.27□□□□□ -0.77
RPS28-204ENST00000602140 MGMTP16455 207 aa10.27□□□□□ -0.77
RPS28-204ENST00000602140 MED21Q13503 144 aa10.27□□□□□ -0.77
RPS28-204ENST00000602140 GNMTQ14749 295 aa10.27□□□□□ -0.77
RPS28-204ENST00000602140 MMDQ15546 238 aa10.27□□□□□ -0.77
RPS28-204ENST00000602140 MORN2Q502X0 79 aa10.27□□□□□ -0.77
RPS28-204ENST00000602140 TRAT1Q6PIZ9 186 aa10.27□□□□□ -0.77
RPS28-204ENST00000602140 C5orf24Q7Z6I8 188 aa10.27□□□□□ -0.77
RPS28-204ENST00000602140 ZNF485Q8NCK3 441 aa10.27□□□□□ -0.77
RPS28-204ENST00000602140 OR11H1Q8NG94 326 aa10.27□□□□□ -0.77
RPS28-204ENST00000602140 TAF9BQ9HBM6 251 aa10.27□□□□□ -0.77
RPS28-204ENST00000602140 ZNF580Q9UK33 172 aa10.27□□□□□ -0.77
RPS28-204ENST00000602140 U3KQK5 164 aa10.27□□□□□ -0.77
RPS28-204ENST00000602140 FAM90A10PA6NDY2 464 aa10.26□□□□□ -0.77
RPS28-204ENST00000602140 FAM90A7PA6NKC0 464 aa10.26□□□□□ -0.77
RPS28-204ENST00000602140 FAM90A23PA8MXZ1 464 aa10.26□□□□□ -0.77
RPS28-204ENST00000602140 CA11O75493 328 aa10.26□□□□□ -0.77
RPS28-204ENST00000602140 CRTAPO75718 401 aaPredicted RBP10.26□□□□□ -0.77
RPS28-204ENST00000602140 SC5DO75845 299 aa10.26□□□□□ -0.77
RPS28-204ENST00000602140 OR5H8P0DN80 308 aa10.26□□□□□ -0.77
RPS28-204ENST00000602140 FUT3P21217 361 aa10.26□□□□□ -0.77
RPS28-204ENST00000602140 CAPGP40121 348 aa10.26□□□□□ -0.77
RPS28-204ENST00000602140 FHL3Q13643 280 aa10.26□□□□□ -0.77
RPS28-204ENST00000602140 ZNF260Q3ZCT1 412 aa10.26□□□□□ -0.77
RPS28-204ENST00000602140 NKAPLQ5M9Q1 402 aa10.26□□□□□ -0.77
RPS28-204ENST00000602140 SIGIRRQ6IA17 410 aa10.26□□□□□ -0.77
RPS28-204ENST00000602140 TMEM65Q6PI78 240 aa10.26□□□□□ -0.77
RPS28-204ENST00000602140 CDH26Q8IXH8 852 aa10.26□□□□□ -0.77
RPS28-204ENST00000602140 OR52L2PQ8NGH6 319 aa10.26□□□□□ -0.77
RPS28-204ENST00000602140 MYOZ3Q8TDC0 251 aa10.26□□□□□ -0.77
RPS28-204ENST00000602140 CYGBQ8WWM9 190 aa10.26□□□□□ -0.77
RPS28-204ENST00000602140 RITA1Q96K30 269 aa10.26□□□□□ -0.77
RPS28-204ENST00000602140 Q96M66 194 aa10.26□□□□□ -0.77
RPS28-204ENST00000602140 KLK15Q9H2R5 256 aa10.26□□□□□ -0.77
RPS28-204ENST00000602140 MBNL3Q9NUK0 354 aaKnown RBP10.26□□□□□ -0.77
RPS28-204ENST00000602140 KCNIP1Q9NZI2 227 aa10.26□□□□□ -0.77
RPS28-204ENST00000602140 WSB1Q9Y6I7 421 aa10.26□□□□□ -0.77
RPS28-204ENST00000602140 RYR3Q15413 4870 aa10.26□□□□□ -0.77
RPS28-204ENST00000602140 G3V318 75 aa10.25□□□□□ -0.77
RPS28-204ENST00000602140 ATP6V0E1O15342 81 aa10.25□□□□□ -0.77
RPS28-204ENST00000602140 GLAP06280 429 aa10.25□□□□□ -0.77
RPS28-204ENST00000602140 CNTFRP26992 372 aa10.25□□□□□ -0.77
RPS28-204ENST00000602140 PPIFP30405 207 aaKnown RBP10.25□□□□□ -0.77
RPS28-204ENST00000602140 PPP1CCP36873 323 aaKnown RBP10.25□□□□□ -0.77
RPS28-204ENST00000602140 TAS2R43P59537 309 aa10.25□□□□□ -0.77
RPS28-204ENST00000602140 ACTBP60709 375 aa10.25□□□□□ -0.77
RPS28-204ENST00000602140 ST3GAL4Q11206 333 aa10.25□□□□□ -0.77
RPS28-204ENST00000602140 LRRC36Q1X8D7 754 aa10.25□□□□□ -0.77
RPS28-204ENST00000602140 TTC23Q5W5X9 447 aa10.25□□□□□ -0.77
RPS28-204ENST00000602140 LYPD6Q86Y78 171 aa10.25□□□□□ -0.77
RPS28-204ENST00000602140 ODF3L1Q8IXM7 274 aa10.25□□□□□ -0.77
RPS28-204ENST00000602140 MRPL30Q8TCC3 161 aaKnown RBP10.25□□□□□ -0.77
RPS28-204ENST00000602140 GGHQ92820 318 aa10.25□□□□□ -0.77
RPS28-204ENST00000602140 FAM46BQ96A09 425 aa10.25□□□□□ -0.77
RPS28-204ENST00000602140 UBE2E2Q96LR5 201 aa10.25□□□□□ -0.77
RPS28-204ENST00000602140 DERL3Q96Q80 235 aa10.25□□□□□ -0.77
RPS28-204ENST00000602140 OR5B12Q96R08 314 aa10.25□□□□□ -0.77
RPS28-204ENST00000602140 ASCL2Q99929 193 aa10.25□□□□□ -0.77
RPS28-204ENST00000602140 NABP2Q9BQ15 211 aa10.25□□□□□ -0.77
RPS28-204ENST00000602140 CHCHD6Q9BRQ6 235 aa10.25□□□□□ -0.77
RPS28-204ENST00000602140 ABHD14AQ9BUJ0 271 aa10.25□□□□□ -0.77
RPS28-204ENST00000602140 MRPL20Q9BYC9 149 aaKnown RBP10.25□□□□□ -0.77
RPS28-204ENST00000602140 GNB4Q9HAV0 340 aa10.25□□□□□ -0.77
RPS28-204ENST00000602140 PARP11Q9NR21 331 aa10.25□□□□□ -0.77
RPS28-204ENST00000602140 JPT1Q9UK76 154 aa10.25□□□□□ -0.77
RPS28-204ENST00000602140 I3L521 148 aa10.24□□□□□ -0.77
RPS28-204ENST00000602140 PDCD6O75340 191 aa10.24□□□□□ -0.77
RPS28-204ENST00000602140 HLA-DRB1P01911 266 aa10.24□□□□□ -0.77
RPS28-204ENST00000602140 CELP19835 753 aa10.24□□□□□ -0.77
RPS28-204ENST00000602140 KIAA0141Q14154 515 aaPredicted RBP10.24□□□□□ -0.77
RPS28-204ENST00000602140 DOC2BQ14184 412 aa10.24□□□□□ -0.77
RPS28-204ENST00000602140 ASPHD1Q5U4P2 390 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms