RNA–Protein interactions for RNA: ENST00000601689.1

UPF1-212, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-212ENST00000601689 TXNL1O43396 289 aa15.58■□□□□ 0.08
UPF1-212ENST00000601689 SCGNO76038 276 aa15.58■□□□□ 0.08
UPF1-212ENST00000601689 CD3GP09693 182 aa15.58■□□□□ 0.08
UPF1-212ENST00000601689 TMEM219Q86XT9 240 aa15.58■□□□□ 0.08
UPF1-212ENST00000601689 PHF21AQ96BD5 680 aa15.58■□□□□ 0.08
UPF1-212ENST00000601689 RAB3CQ96E17 227 aa15.58■□□□□ 0.08
UPF1-212ENST00000601689 C12orf4Q9NQ89 552 aa15.58■□□□□ 0.08
UPF1-212ENST00000601689 LY6LH3BQJ8 138 aa15.57■□□□□ 0.08
UPF1-212ENST00000601689 M0QZK8 103 aa15.57■□□□□ 0.08
UPF1-212ENST00000601689 HSD17B6O14756 317 aa15.57■□□□□ 0.08
UPF1-212ENST00000601689 LOXL3P58215 753 aa15.57■□□□□ 0.08
UPF1-212ENST00000601689 HES1Q14469 280 aa15.57■□□□□ 0.08
UPF1-212ENST00000601689 THNSL2Q86YJ6 484 aa15.57■□□□□ 0.08
UPF1-212ENST00000601689 OR10V1Q8NGI7 309 aa15.57■□□□□ 0.08
UPF1-212ENST00000601689 OR1L1Q8NH94 360 aa15.57■□□□□ 0.08
UPF1-212ENST00000601689 IL1F10Q8WWZ1 152 aa15.57■□□□□ 0.08
UPF1-212ENST00000601689 ARHGAP5-AS1Q96IT6 56 aa15.57■□□□□ 0.08
UPF1-212ENST00000601689 CENPOQ9BU64 300 aa15.57■□□□□ 0.08
UPF1-212ENST00000601689 PECRQ9BY49 303 aa15.57■□□□□ 0.08
UPF1-212ENST00000601689 ZNF696Q9H7X3 374 aa15.57■□□□□ 0.08
UPF1-212ENST00000601689 AK3Q9UIJ7 227 aa15.57■□□□□ 0.08
UPF1-212ENST00000601689 A0A0A6YYD4 124 aa15.56■□□□□ 0.08
UPF1-212ENST00000601689 A0A1W2PPE3 182 aa15.56■□□□□ 0.08
UPF1-212ENST00000601689 SHISA3A0PJX4 238 aa15.56■□□□□ 0.08
UPF1-212ENST00000601689 LDLRAD4O15165 306 aa15.56■□□□□ 0.08
UPF1-212ENST00000601689 TMEM127O75204 238 aa15.56■□□□□ 0.08
UPF1-212ENST00000601689 SDC2P34741 201 aa15.56■□□□□ 0.08
UPF1-212ENST00000601689 MOB3BQ86TA1 216 aa15.56■□□□□ 0.08
UPF1-212ENST00000601689 CROCCP3Q8IVE0 287 aa15.56■□□□□ 0.08
UPF1-212ENST00000601689 OR10R2Q8NGX6 335 aa15.56■□□□□ 0.08
UPF1-212ENST00000601689 WFDC12Q8WWY7 111 aa15.56■□□□□ 0.08
UPF1-212ENST00000601689 SLC25A33Q9BSK2 321 aa15.56■□□□□ 0.08
UPF1-212ENST00000601689 ATG5Q9H1Y0 275 aa15.56■□□□□ 0.08
UPF1-212ENST00000601689 DAPK2Q9UIK4 370 aa15.56■□□□□ 0.08
UPF1-212ENST00000601689 TRBV6-6A0A0A6YYG2 114 aa15.55■□□□□ 0.08
UPF1-212ENST00000601689 TIMM23O14925 209 aa15.55■□□□□ 0.08
UPF1-212ENST00000601689 HSPA12AO43301 675 aa15.55■□□□□ 0.08
UPF1-212ENST00000601689 YPEL1O60688 119 aa15.55■□□□□ 0.08
UPF1-212ENST00000601689 NAPSAO96009 420 aa15.55■□□□□ 0.08
UPF1-212ENST00000601689 TALDO1P37837 337 aa15.55■□□□□ 0.08
UPF1-212ENST00000601689 MXD1Q05195 221 aa15.55■□□□□ 0.08
UPF1-212ENST00000601689 ZNF816Q0VGE8 651 aaPredicted RBP15.55■□□□□ 0.08
UPF1-212ENST00000601689 HMGN3Q15651 99 aa15.55■□□□□ 0.08
UPF1-212ENST00000601689 MORN2Q502X0 79 aa15.55■□□□□ 0.08
UPF1-212ENST00000601689 SFXN4Q6P4A7 337 aa15.55■□□□□ 0.08
UPF1-212ENST00000601689 SLC25A48Q6ZT89 311 aaKnown RBP15.55■□□□□ 0.08
UPF1-212ENST00000601689 OR2AK2Q8NG84 335 aa15.55■□□□□ 0.08
UPF1-212ENST00000601689 YPEL2Q96QA6 119 aa15.55■□□□□ 0.08
UPF1-212ENST00000601689 SMIM30A4D0T7 59 aa15.54■□□□□ 0.08
UPF1-212ENST00000601689 SERPINE3A8MV23 424 aa15.54■□□□□ 0.08
UPF1-212ENST00000601689 CHST1O43916 411 aa15.54■□□□□ 0.08
UPF1-212ENST00000601689 AIREO43918 545 aa15.54■□□□□ 0.08
UPF1-212ENST00000601689 OR2F2O95006 317 aa15.54■□□□□ 0.08
UPF1-212ENST00000601689 ZBTB25P24278 435 aa15.54■□□□□ 0.08
UPF1-212ENST00000601689 TMEM50BP56557 158 aa15.54■□□□□ 0.08
UPF1-212ENST00000601689 SCAND1P57086 179 aa15.54■□□□□ 0.08
UPF1-212ENST00000601689 PROK1P58294 105 aa15.54■□□□□ 0.08
UPF1-212ENST00000601689 ARFRP1Q13795 201 aa15.54■□□□□ 0.08
UPF1-212ENST00000601689 LY6G6FQ5SQ64 297 aa15.54■□□□□ 0.08
UPF1-212ENST00000601689 CCBE1Q6UXH8 406 aaPredicted RBP15.54■□□□□ 0.08
UPF1-212ENST00000601689 TGIF2LXQ8IUE1 241 aa15.54■□□□□ 0.08
UPF1-212ENST00000601689 LYG1Q8N1E2 194 aa15.54■□□□□ 0.08
UPF1-212ENST00000601689 OR56B4Q8NH76 319 aa15.54■□□□□ 0.08
UPF1-212ENST00000601689 RBM14Q96PK6 669 aaKnown RBP15.54■□□□□ 0.08
UPF1-212ENST00000601689 ABHD14AQ9BUJ0 271 aa15.54■□□□□ 0.08
UPF1-212ENST00000601689 GHITMQ9H3K2 345 aa15.54■□□□□ 0.08
UPF1-212ENST00000601689 SLC2A2P11168 524 aaPredicted RBP15.53■□□□□ 0.08
UPF1-212ENST00000601689 TMEM11P17152 192 aa15.53■□□□□ 0.08
UPF1-212ENST00000601689 JUNBP17275 347 aaPredicted RBP15.53■□□□□ 0.08
UPF1-212ENST00000601689 CD24P25063 80 aa15.53■□□□□ 0.08
UPF1-212ENST00000601689 ZNF880Q6PDB4 577 aa15.53■□□□□ 0.08
UPF1-212ENST00000601689 DRAM1Q8N682 238 aa15.53■□□□□ 0.08
UPF1-212ENST00000601689 OR52L2PQ8NGH6 319 aa15.53■□□□□ 0.08
UPF1-212ENST00000601689 EDARADDQ8WWZ3 215 aa15.53■□□□□ 0.08
UPF1-212ENST00000601689 A0A075B6Q4 140 aa15.52■□□□□ 0.08
UPF1-212ENST00000601689 IGHV1-3A0A0C4DH29 117 aa15.52■□□□□ 0.08
UPF1-212ENST00000601689 SNRNP70P08621 437 aaKnown RBP15.52■□□□□ 0.08
UPF1-212ENST00000601689 HLA-DRB3P79483 266 aa15.52■□□□□ 0.08
UPF1-212ENST00000601689 KIR2DS1Q14954 304 aa15.52■□□□□ 0.08
UPF1-212ENST00000601689 UTF1Q5T230 341 aa15.52■□□□□ 0.08
UPF1-212ENST00000601689 IDNKQ5T6J7 187 aa15.52■□□□□ 0.08
UPF1-212ENST00000601689 Q9N2K0 584 aa15.52■□□□□ 0.08
UPF1-212ENST00000601689 PIPOXQ9P0Z9 390 aa15.52■□□□□ 0.08
UPF1-212ENST00000601689 MOB4Q9Y3A3 225 aa15.52■□□□□ 0.08
UPF1-212ENST00000601689 ETV7Q9Y603 341 aa15.52■□□□□ 0.08
UPF1-212ENST00000601689 ANK2Q01484 3957 aa15.51■□□□□ 0.07
UPF1-212ENST00000601689 A0A1W2PPI3 338 aa15.51■□□□□ 0.07
UPF1-212ENST00000601689 FOXI3A8MTJ6 420 aaPredicted RBP15.51■□□□□ 0.07
UPF1-212ENST00000601689 M0QZ24 198 aa15.51■□□□□ 0.07
UPF1-212ENST00000601689 HIST1H1DP16402 221 aaKnown RBP15.51■□□□□ 0.07
UPF1-212ENST00000601689 PPP1CCP36873 323 aaKnown RBP15.51■□□□□ 0.07
UPF1-212ENST00000601689 VDAC2P45880 294 aaPredicted RBP15.51■□□□□ 0.07
UPF1-212ENST00000601689 REG1BP48304 166 aa15.51■□□□□ 0.07
UPF1-212ENST00000601689 SERPINB10P48595 397 aa15.51■□□□□ 0.07
UPF1-212ENST00000601689 ZNF137PP52743 207 aa15.51■□□□□ 0.07
UPF1-212ENST00000601689 CT45A1Q5HYN5 189 aa15.51■□□□□ 0.07
UPF1-212ENST00000601689 PLAC9Q5JTB6 97 aa15.51■□□□□ 0.07
UPF1-212ENST00000601689 OR2T10Q8NGZ9 312 aa15.51■□□□□ 0.07
UPF1-212ENST00000601689 CT45A3Q8NHU0 189 aa15.51■□□□□ 0.07
UPF1-212ENST00000601689 RTN4IP1Q8WWV3 396 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms