RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 KCNIP1Q9NZI2 227 aa13.72□□□□□ -0.21
HERC3-214ENST00000601319 GNG12Q9UBI6 72 aa13.72□□□□□ -0.21
HERC3-214ENST00000601319 JPT1Q9UK76 154 aa13.72□□□□□ -0.21
HERC3-214ENST00000601319 MOB4Q9Y3A3 225 aa13.72□□□□□ -0.21
HERC3-214ENST00000601319 LRRC42Q9Y546 428 aa13.72□□□□□ -0.21
HERC3-214ENST00000601319 V9GY05 133 aa13.72□□□□□ -0.21
HERC3-214ENST00000601319 IGHV3-43A0A0B4J1X8 118 aa13.71□□□□□ -0.21
HERC3-214ENST00000601319 A0A1W2PPE3 182 aa13.71□□□□□ -0.21
HERC3-214ENST00000601319 FOXI3A8MTJ6 420 aaPredicted RBP13.71□□□□□ -0.21
HERC3-214ENST00000601319 TSPAN15O95858 294 aa13.71□□□□□ -0.21
HERC3-214ENST00000601319 NAPSAO96009 420 aa13.71□□□□□ -0.21
HERC3-214ENST00000601319 GAPDHP04406 335 aaKnown RBP13.71□□□□□ -0.21
HERC3-214ENST00000601319 AMY1AP04745 511 aa13.71□□□□□ -0.21
HERC3-214ENST00000601319 AMY2AP04746 511 aa13.71□□□□□ -0.21
HERC3-214ENST00000601319 SNRNP70P08621 437 aaKnown RBP13.71□□□□□ -0.21
HERC3-214ENST00000601319 IGHV3-43DP0DP04 118 aa13.71□□□□□ -0.21
HERC3-214ENST00000601319 HTD2P86397 168 aa13.71□□□□□ -0.21
HERC3-214ENST00000601319 HMGN3Q15651 99 aa13.71□□□□□ -0.21
HERC3-214ENST00000601319 ARSJQ5FYB0 599 aaPredicted RBP13.71□□□□□ -0.21
HERC3-214ENST00000601319 LY6G6FQ5SQ64 297 aa13.71□□□□□ -0.21
HERC3-214ENST00000601319 FAAP24Q9BTP7 215 aa13.71□□□□□ -0.21
HERC3-214ENST00000601319 HSF4Q9ULV5 492 aa13.71□□□□□ -0.21
HERC3-214ENST00000601319 RRP15Q9Y3B9 282 aaKnown RBP13.71□□□□□ -0.21
HERC3-214ENST00000601319 TRBV6-6A0A0A6YYG2 114 aa13.7□□□□□ -0.22
HERC3-214ENST00000601319 IGHV1-3A0A0C4DH29 117 aa13.7□□□□□ -0.22
HERC3-214ENST00000601319 PDCD5O14737 125 aa13.7□□□□□ -0.22
HERC3-214ENST00000601319 LDLRAD4O15165 306 aa13.7□□□□□ -0.22
HERC3-214ENST00000601319 FBXO24O75426 580 aa13.7□□□□□ -0.22
HERC3-214ENST00000601319 MYL9P24844 172 aa13.7□□□□□ -0.22
HERC3-214ENST00000601319 BLVRBP30043 206 aaPredicted RBP13.7□□□□□ -0.22
HERC3-214ENST00000601319 EBI3Q14213 229 aa13.7□□□□□ -0.22
HERC3-214ENST00000601319 FAM53AQ6NSI3 398 aaPredicted RBP13.7□□□□□ -0.22
HERC3-214ENST00000601319 ZNF880Q6PDB4 577 aa13.7□□□□□ -0.22
HERC3-214ENST00000601319 ZNF773Q6PK81 442 aa13.7□□□□□ -0.22
HERC3-214ENST00000601319 PRR18Q8N4B5 295 aa13.7□□□□□ -0.22
HERC3-214ENST00000601319 OR51D1Q8NGF3 324 aa13.7□□□□□ -0.22
HERC3-214ENST00000601319 RTN4IP1Q8WWV3 396 aaPredicted RBP13.7□□□□□ -0.22
HERC3-214ENST00000601319 FAM3DQ96BQ1 224 aa13.7□□□□□ -0.22
HERC3-214ENST00000601319 RIMS4Q9H426 269 aaPredicted RBP13.7□□□□□ -0.22
HERC3-214ENST00000601319 OR2S2Q9NQN1 319 aa13.7□□□□□ -0.22
HERC3-214ENST00000601319 STEAP1Q9UHE8 339 aa13.7□□□□□ -0.22
HERC3-214ENST00000601319 SLC31A2O15432 143 aa13.69□□□□□ -0.22
HERC3-214ENST00000601319 FGF16O43320 207 aa13.69□□□□□ -0.22
HERC3-214ENST00000601319 PEX14O75381 377 aa13.69□□□□□ -0.22
HERC3-214ENST00000601319 LPLP06858 475 aa13.69□□□□□ -0.22
HERC3-214ENST00000601319 CSF1P09603 554 aa13.69□□□□□ -0.22
HERC3-214ENST00000601319 TMEM95Q3KNT9 176 aa13.69□□□□□ -0.22
HERC3-214ENST00000601319 ABCA11PQ4W5N1 156 aa13.69□□□□□ -0.22
HERC3-214ENST00000601319 MORN2Q502X0 79 aa13.69□□□□□ -0.22
HERC3-214ENST00000601319 CT45A1Q5HYN5 189 aa13.69□□□□□ -0.22
HERC3-214ENST00000601319 Q6ZPA2 131 aa13.69□□□□□ -0.22
HERC3-214ENST00000601319 CT45A3Q8NHU0 189 aa13.69□□□□□ -0.22
HERC3-214ENST00000601319 GALMQ96C23 342 aa13.69□□□□□ -0.22
HERC3-214ENST00000601319 PLEKHJ1Q9NW61 149 aa13.69□□□□□ -0.22
HERC3-214ENST00000601319 SHISA3A0PJX4 238 aa13.68□□□□□ -0.22
HERC3-214ENST00000601319 IFITM5A6NNB3 132 aa13.68□□□□□ -0.22
HERC3-214ENST00000601319 SOCS1O15524 211 aa13.68□□□□□ -0.22
HERC3-214ENST00000601319 YPEL1O60688 119 aa13.68□□□□□ -0.22
HERC3-214ENST00000601319 IGKV1D-33P01593 117 aa13.68□□□□□ -0.22
HERC3-214ENST00000601319 IGKV1-33P01594 117 aa13.68□□□□□ -0.22
HERC3-214ENST00000601319 TMEM11P17152 192 aa13.68□□□□□ -0.22
HERC3-214ENST00000601319 PSMB9P28065 219 aa13.68□□□□□ -0.22
HERC3-214ENST00000601319 FGF9P31371 208 aaPredicted RBP13.68□□□□□ -0.22
HERC3-214ENST00000601319 ZNF134P52741 427 aa13.68□□□□□ -0.22
HERC3-214ENST00000601319 CLDN12P56749 244 aa13.68□□□□□ -0.22
HERC3-214ENST00000601319 GNMTQ14749 295 aa13.68□□□□□ -0.22
HERC3-214ENST00000601319 KCTD21Q4G0X4 260 aa13.68□□□□□ -0.22
HERC3-214ENST00000601319 Q8N6K4 173 aa13.68□□□□□ -0.22
HERC3-214ENST00000601319 C5orf56Q8N8D9 126 aa13.68□□□□□ -0.22
HERC3-214ENST00000601319 OR56B1Q8NGI3 324 aa13.68□□□□□ -0.22
HERC3-214ENST00000601319 OR10V1Q8NGI7 309 aa13.68□□□□□ -0.22
HERC3-214ENST00000601319 YPEL2Q96QA6 119 aa13.68□□□□□ -0.22
HERC3-214ENST00000601319 C12orf4Q9NQ89 552 aa13.68□□□□□ -0.22
HERC3-214ENST00000601319 ABRACLQ9P1F3 81 aa13.68□□□□□ -0.22
HERC3-214ENST00000601319 LANCL1O43813 399 aa13.67□□□□□ -0.22
HERC3-214ENST00000601319 RGS11O94810 467 aa13.67□□□□□ -0.22
HERC3-214ENST00000601319 RAB3BP20337 219 aa13.67□□□□□ -0.22
HERC3-214ENST00000601319 CD1BP29016 333 aa13.67□□□□□ -0.22
HERC3-214ENST00000601319 REG1BP48304 166 aa13.67□□□□□ -0.22
HERC3-214ENST00000601319 HES1Q14469 280 aa13.67□□□□□ -0.22
HERC3-214ENST00000601319 C2orf76Q3KRA6 126 aa13.67□□□□□ -0.22
HERC3-214ENST00000601319 C22orf42Q6IC83 251 aa13.67□□□□□ -0.22
HERC3-214ENST00000601319 MOB3BQ86TA1 216 aa13.67□□□□□ -0.22
HERC3-214ENST00000601319 TGIF2LXQ8IUE1 241 aa13.67□□□□□ -0.22
HERC3-214ENST00000601319 C11orf44Q8N8P7 122 aa13.67□□□□□ -0.22
HERC3-214ENST00000601319 ABHD14AQ9BUJ0 271 aa13.67□□□□□ -0.22
HERC3-214ENST00000601319 CHMP1AQ9HD42 196 aaPredicted RBP13.67□□□□□ -0.22
HERC3-214ENST00000601319 AK3Q9UIJ7 227 aa13.67□□□□□ -0.22
HERC3-214ENST00000601319 MGAT4AQ9UM21 535 aa13.67□□□□□ -0.22
HERC3-214ENST00000601319 STUB1Q9UNE7 303 aa13.67□□□□□ -0.22
HERC3-214ENST00000601319 TMEM272A0A1B0GTI8 110 aa13.66□□□□□ -0.22
HERC3-214ENST00000601319 CD28P10747 220 aa13.66□□□□□ -0.22
HERC3-214ENST00000601319 PPP1CCP36873 323 aaKnown RBP13.66□□□□□ -0.22
HERC3-214ENST00000601319 VEGFCP49767 419 aa13.66□□□□□ -0.22
HERC3-214ENST00000601319 TMEM50BP56557 158 aa13.66□□□□□ -0.22
HERC3-214ENST00000601319 OR10A3P58181 314 aa13.66□□□□□ -0.22
HERC3-214ENST00000601319 HES5Q5TA89 166 aa13.66□□□□□ -0.22
HERC3-214ENST00000601319 NDUFA11Q86Y39 141 aa13.66□□□□□ -0.22
HERC3-214ENST00000601319 OR52L2PQ8NGH6 319 aa13.66□□□□□ -0.22
HERC3-214ENST00000601319 OR2T10Q8NGZ9 312 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms