RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 C1orf100Q5SVJ3 147 aa12.48□□□□□ -0.41
VRK3-221ENST00000600284 C6orf141Q5SZD1 244 aa12.48□□□□□ -0.41
VRK3-221ENST00000600284 STPG2Q8N412 459 aa12.48□□□□□ -0.41
VRK3-221ENST00000600284 Q8N9W7 124 aa12.48□□□□□ -0.41
VRK3-221ENST00000600284 CT45A3Q8NHU0 189 aa12.48□□□□□ -0.41
VRK3-221ENST00000600284 GPR61Q9BZJ8 451 aa12.48□□□□□ -0.41
VRK3-221ENST00000600284 TAF9BQ9HBM6 251 aa12.48□□□□□ -0.41
VRK3-221ENST00000600284 SCN3BQ9NY72 215 aa12.48□□□□□ -0.41
VRK3-221ENST00000600284 UBE2QL1A1L167 161 aa12.47□□□□□ -0.41
VRK3-221ENST00000600284 PTGES3LE9PB15 166 aa12.47□□□□□ -0.41
VRK3-221ENST00000600284 SLC31A2O15432 143 aa12.47□□□□□ -0.41
VRK3-221ENST00000600284 LANCL1O43813 399 aa12.47□□□□□ -0.41
VRK3-221ENST00000600284 CD37P11049 281 aa12.47□□□□□ -0.41
VRK3-221ENST00000600284 GP2P55259 537 aaKnown RBP12.47□□□□□ -0.41
VRK3-221ENST00000600284 HTD2P86397 168 aa12.47□□□□□ -0.41
VRK3-221ENST00000600284 MORN2Q502X0 79 aa12.47□□□□□ -0.41
VRK3-221ENST00000600284 LY6G6FQ5SQ64 297 aa12.47□□□□□ -0.41
VRK3-221ENST00000600284 FAM53AQ6NSI3 398 aaPredicted RBP12.47□□□□□ -0.41
VRK3-221ENST00000600284 TEX38Q6PEX7 206 aa12.47□□□□□ -0.41
VRK3-221ENST00000600284 LRRTM1Q86UE6 522 aa12.47□□□□□ -0.41
VRK3-221ENST00000600284 PRR18Q8N4B5 295 aa12.47□□□□□ -0.41
VRK3-221ENST00000600284 LINC00482Q8N8I6 264 aa12.47□□□□□ -0.41
VRK3-221ENST00000600284 OR1L1Q8NH94 360 aa12.47□□□□□ -0.41
VRK3-221ENST00000600284 NEDD4LQ96PU5 975 aa12.47□□□□□ -0.41
VRK3-221ENST00000600284 OR2S2Q9NQN1 319 aa12.47□□□□□ -0.41
VRK3-221ENST00000600284 PLSCR3Q9NRY6 295 aa12.47□□□□□ -0.41
VRK3-221ENST00000600284 JPT1Q9UK76 154 aa12.47□□□□□ -0.41
VRK3-221ENST00000600284 LSM2Q9Y333 95 aaKnown RBP12.47□□□□□ -0.41
VRK3-221ENST00000600284 MPIG6BO95866 241 aa12.46□□□□□ -0.41
VRK3-221ENST00000600284 SRMP19623 302 aa12.46□□□□□ -0.41
VRK3-221ENST00000600284 VHLP40337 213 aa12.46□□□□□ -0.41
VRK3-221ENST00000600284 GPR12P47775 334 aa12.46□□□□□ -0.41
VRK3-221ENST00000600284 THBS3P49746 956 aa12.46□□□□□ -0.41
VRK3-221ENST00000600284 PNLIPRP3Q17RR3 467 aa12.46□□□□□ -0.41
VRK3-221ENST00000600284 OR2W3Q7Z3T1 314 aa12.46□□□□□ -0.41
VRK3-221ENST00000600284 OR10V1Q8NGI7 309 aa12.46□□□□□ -0.41
VRK3-221ENST00000600284 KCNG3Q8TAE7 436 aa12.46□□□□□ -0.41
VRK3-221ENST00000600284 MRPL30Q8TCC3 161 aaKnown RBP12.46□□□□□ -0.41
VRK3-221ENST00000600284 FAM46BQ96A09 425 aa12.46□□□□□ -0.41
VRK3-221ENST00000600284 S1PR3Q99500 378 aa12.46□□□□□ -0.41
VRK3-221ENST00000600284 RASL11BQ9BPW5 248 aa12.46□□□□□ -0.41
VRK3-221ENST00000600284 LINC01548A6NM66 108 aa12.45□□□□□ -0.42
VRK3-221ENST00000600284 YPEL1O60688 119 aa12.45□□□□□ -0.42
VRK3-221ENST00000600284 RGS11O94810 467 aa12.45□□□□□ -0.42
VRK3-221ENST00000600284 VSIG8P0DPA2 414 aa12.45□□□□□ -0.42
VRK3-221ENST00000600284 CHATP28329 748 aa12.45□□□□□ -0.42
VRK3-221ENST00000600284 MYCNOSP40205 109 aa12.45□□□□□ -0.42
VRK3-221ENST00000600284 RPS27AP62979 156 aaKnown RBP12.45□□□□□ -0.42
VRK3-221ENST00000600284 INSL4Q14641 139 aa12.45□□□□□ -0.42
VRK3-221ENST00000600284 IRF3Q14653 427 aa12.45□□□□□ -0.42
VRK3-221ENST00000600284 HSD17B12Q53GQ0 312 aa12.45□□□□□ -0.42
VRK3-221ENST00000600284 RBM48Q5RL73 367 aaKnown RBP12.45□□□□□ -0.42
VRK3-221ENST00000600284 ETV3LQ6ZN32 361 aa12.45□□□□□ -0.42
VRK3-221ENST00000600284 CEACAM19Q7Z692 300 aa12.45□□□□□ -0.42
VRK3-221ENST00000600284 MRPL41Q8IXM3 137 aaKnown RBP12.45□□□□□ -0.42
VRK3-221ENST00000600284 FAM71E2Q8N5Q1 922 aa12.45□□□□□ -0.42
VRK3-221ENST00000600284 GALMQ96C23 342 aa12.45□□□□□ -0.42
VRK3-221ENST00000600284 YPEL2Q96QA6 119 aa12.45□□□□□ -0.42
VRK3-221ENST00000600284 MCRIP2Q9BUT9 160 aaKnown RBP12.45□□□□□ -0.42
VRK3-221ENST00000600284 TMED9Q9BVK6 235 aa12.45□□□□□ -0.42
VRK3-221ENST00000600284 TM2D1Q9BX74 207 aa12.45□□□□□ -0.42
VRK3-221ENST00000600284 TMEM59Q9BXS4 323 aa12.45□□□□□ -0.42
VRK3-221ENST00000600284 LINC00527Q9UJ94 153 aa12.45□□□□□ -0.42
VRK3-221ENST00000600284 ZNF580Q9UK33 172 aa12.45□□□□□ -0.42
VRK3-221ENST00000600284 TPRKBQ9Y3C4 175 aa12.45□□□□□ -0.42
VRK3-221ENST00000600284 ZNF736B4DX44 427 aaPredicted RBP12.44□□□□□ -0.42
VRK3-221ENST00000600284 SLC22A1O15245 554 aa12.44□□□□□ -0.42
VRK3-221ENST00000600284 RRP9O43818 475 aaKnown RBP12.44□□□□□ -0.42
VRK3-221ENST00000600284 UCHL1P09936 223 aa12.44□□□□□ -0.42
VRK3-221ENST00000600284 HTR2CP28335 458 aa12.44□□□□□ -0.42
VRK3-221ENST00000600284 MED22Q15528 200 aa12.44□□□□□ -0.42
VRK3-221ENST00000600284 NKAPLQ5M9Q1 402 aa12.44□□□□□ -0.42
VRK3-221ENST00000600284 FAM27D1Q5T7N8 215 aa12.44□□□□□ -0.42
VRK3-221ENST00000600284 CHCHD6Q9BRQ6 235 aa12.44□□□□□ -0.42
VRK3-221ENST00000600284 ABHD14AQ9BUJ0 271 aa12.44□□□□□ -0.42
VRK3-221ENST00000600284 ISYNA1Q9NPH2 558 aa12.44□□□□□ -0.42
VRK3-221ENST00000600284 NKX1-2Q9UD57 310 aaPredicted RBP12.44□□□□□ -0.42
VRK3-221ENST00000600284 NUDT19A8MXV4 375 aa12.43□□□□□ -0.42
VRK3-221ENST00000600284 BPNT1O95861 308 aa12.43□□□□□ -0.42
VRK3-221ENST00000600284 ELANEP08246 267 aa12.43□□□□□ -0.42
VRK3-221ENST00000600284 SOX6P35712 828 aa12.43□□□□□ -0.42
VRK3-221ENST00000600284 F2RL1P55085 397 aa12.43□□□□□ -0.42
VRK3-221ENST00000600284 EGFEM1PQ0D2K5 195 aa12.43□□□□□ -0.42
VRK3-221ENST00000600284 LSAMPQ13449 338 aa12.43□□□□□ -0.42
VRK3-221ENST00000600284 FOXE3Q13461 319 aa12.43□□□□□ -0.42
VRK3-221ENST00000600284 TPBGQ13641 420 aa12.43□□□□□ -0.42
VRK3-221ENST00000600284 TRAM1Q15629 374 aa12.43□□□□□ -0.42
VRK3-221ENST00000600284 ZNF695Q8IW36 515 aa12.43□□□□□ -0.42
VRK3-221ENST00000600284 RNF152Q8N8N0 203 aa12.43□□□□□ -0.42
VRK3-221ENST00000600284 OR52L2PQ8NGH6 319 aa12.43□□□□□ -0.42
VRK3-221ENST00000600284 OR6M1Q8NGM8 313 aa12.43□□□□□ -0.42
VRK3-221ENST00000600284 UFD1Q92890 307 aa12.43□□□□□ -0.42
VRK3-221ENST00000600284 P2RX4Q99571 388 aa12.43□□□□□ -0.42
VRK3-221ENST00000600284 SULT4A1Q9BR01 284 aa12.43□□□□□ -0.42
VRK3-221ENST00000600284 FAAP24Q9BTP7 215 aa12.43□□□□□ -0.42
VRK3-221ENST00000600284 RIMS4Q9H426 269 aaPredicted RBP12.43□□□□□ -0.42
VRK3-221ENST00000600284 DUSP21Q9H596 190 aa12.43□□□□□ -0.42
VRK3-221ENST00000600284 ABRACLQ9P1F3 81 aa12.43□□□□□ -0.42
VRK3-221ENST00000600284 TMEM14DPA8MWL7 114 aa12.42□□□□□ -0.42
VRK3-221ENST00000600284 ANKRD65E5RJM6 399 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms