RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 LY6G6FQ5SQ64 297 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 Q6ZS49 121 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 MOB1BQ7L9L4 216 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 IZUMO1Q8IYV9 350 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 CT45A3Q8NHU0 189 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 DUX5Q96PT3 197 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 MIXL1Q9H2W2 232 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 AUNIPQ9H7T9 357 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 KCNIP1Q9NZI2 227 aa11.1□□□□□ -0.63
VRK3-219ENST00000600137 ZNF230Q9UIE0 474 aaPredicted RBP11.1□□□□□ -0.63
VRK3-219ENST00000600137 VGLL3A8MV65 326 aa11.09□□□□□ -0.63
VRK3-219ENST00000600137 CTDSP2O14595 271 aa11.09□□□□□ -0.63
VRK3-219ENST00000600137 YPEL1O60688 119 aa11.09□□□□□ -0.63
VRK3-219ENST00000600137 HPGDSO60760 199 aa11.09□□□□□ -0.63
VRK3-219ENST00000600137 HLA-DQB1P01920 261 aa11.09□□□□□ -0.63
VRK3-219ENST00000600137 APOA1P02647 267 aa11.09□□□□□ -0.63
VRK3-219ENST00000600137 HTR1DP28221 377 aa11.09□□□□□ -0.63
VRK3-219ENST00000600137 PRRX1P54821 245 aa11.09□□□□□ -0.63
VRK3-219ENST00000600137 LGALS4P56470 323 aa11.09□□□□□ -0.63
VRK3-219ENST00000600137 HLA-DRB3P79483 266 aa11.09□□□□□ -0.63
VRK3-219ENST00000600137 BAMBIQ13145 260 aa11.09□□□□□ -0.63
VRK3-219ENST00000600137 DIAPH2-AS1Q14236 149 aa11.09□□□□□ -0.63
VRK3-219ENST00000600137 ARL6IP1Q15041 203 aa11.09□□□□□ -0.63
VRK3-219ENST00000600137 PNLIPRP3Q17RR3 467 aa11.09□□□□□ -0.63
VRK3-219ENST00000600137 KRTAP24-1Q3LI83 254 aa11.09□□□□□ -0.63
VRK3-219ENST00000600137 TMEM30BQ3MIR4 351 aa11.09□□□□□ -0.63
VRK3-219ENST00000600137 SLC25A48Q6ZT89 311 aaKnown RBP11.09□□□□□ -0.63
VRK3-219ENST00000600137 PRR18Q8N4B5 295 aa11.09□□□□□ -0.63
VRK3-219ENST00000600137 NUDCD2Q8WVJ2 157 aa11.09□□□□□ -0.63
VRK3-219ENST00000600137 MAFIPQ8WZ33 124 aa11.09□□□□□ -0.63
VRK3-219ENST00000600137 ST6GALNAC6Q969X2 333 aa11.09□□□□□ -0.63
VRK3-219ENST00000600137 S100A16Q96FQ6 103 aaKnown RBP11.09□□□□□ -0.63
VRK3-219ENST00000600137 YPEL2Q96QA6 119 aa11.09□□□□□ -0.63
VRK3-219ENST00000600137 SLIRPQ9GZT3 109 aaKnown RBP11.09□□□□□ -0.63
VRK3-219ENST00000600137 TOLLIPQ9H0E2 274 aa11.09□□□□□ -0.63
VRK3-219ENST00000600137 PARP12Q9H0J9 701 aaKnown RBP11.09□□□□□ -0.63
VRK3-219ENST00000600137 MMP28Q9H239 520 aa11.09□□□□□ -0.63
VRK3-219ENST00000600137 CHMP1AQ9HD42 196 aaPredicted RBP11.09□□□□□ -0.63
VRK3-219ENST00000600137 DIABLOQ9NR28 239 aa11.09□□□□□ -0.63
VRK3-219ENST00000600137 DPM3Q9P2X0 92 aa11.09□□□□□ -0.63
VRK3-219ENST00000600137 FAM96BQ9Y3D0 163 aa11.09□□□□□ -0.63
VRK3-219ENST00000600137 TENM1Q9UKZ4 2725 aa11.08□□□□□ -0.64
VRK3-219ENST00000600137 TRDCB7Z8K6 153 aa11.08□□□□□ -0.64
VRK3-219ENST00000600137 ZNF701M0R085 212 aaPredicted RBP11.08□□□□□ -0.64
VRK3-219ENST00000600137 GSTT2P0CG29 244 aa11.08□□□□□ -0.64
VRK3-219ENST00000600137 GSTT2BP0CG30 244 aa11.08□□□□□ -0.64
VRK3-219ENST00000600137 DTYMKP23919 212 aa11.08□□□□□ -0.64
VRK3-219ENST00000600137 PPP1CCP36873 323 aaKnown RBP11.08□□□□□ -0.64
VRK3-219ENST00000600137 GNG10P50151 68 aa11.08□□□□□ -0.64
VRK3-219ENST00000600137 ARFRP1Q13795 201 aa11.08□□□□□ -0.64
VRK3-219ENST00000600137 SSX2Q16385 188 aa11.08□□□□□ -0.64
VRK3-219ENST00000600137 AANATQ16613 207 aa11.08□□□□□ -0.64
VRK3-219ENST00000600137 FOXB2Q5VYV0 432 aa11.08□□□□□ -0.64
VRK3-219ENST00000600137 STEAP3Q658P3 488 aa11.08□□□□□ -0.64
VRK3-219ENST00000600137 ODF3L1Q8IXM7 274 aa11.08□□□□□ -0.64
VRK3-219ENST00000600137 TMEM86BQ8N661 226 aa11.08□□□□□ -0.64
VRK3-219ENST00000600137 OR10V1Q8NGI7 309 aa11.08□□□□□ -0.64
VRK3-219ENST00000600137 SETD6Q8TBK2 473 aa11.08□□□□□ -0.64
VRK3-219ENST00000600137 ZDHHC16Q969W1 377 aa11.08□□□□□ -0.64
VRK3-219ENST00000600137 GALMQ96C23 342 aa11.08□□□□□ -0.64
VRK3-219ENST00000600137 OCSTAMPQ9BR26 566 aa11.08□□□□□ -0.64
VRK3-219ENST00000600137 NXF2Q9GZY0 626 aaKnown RBP11.08□□□□□ -0.64
VRK3-219ENST00000600137 OR2S2Q9NQN1 319 aa11.08□□□□□ -0.64
VRK3-219ENST00000600137 JPT1Q9UK76 154 aa11.08□□□□□ -0.64
VRK3-219ENST00000600137 MGAT4AQ9UM21 535 aa11.08□□□□□ -0.64
VRK3-219ENST00000600137 HILPDAQ9Y5L2 63 aa11.08□□□□□ -0.64
VRK3-219ENST00000600137 DPPA5A6NC42 116 aa11.07□□□□□ -0.64
VRK3-219ENST00000600137 LEUTXA8MZ59 168 aa11.07□□□□□ -0.64
VRK3-219ENST00000600137 TOR1AO14656 332 aa11.07□□□□□ -0.64
VRK3-219ENST00000600137 RNASE1P07998 156 aaKnown RBP11.07□□□□□ -0.64
VRK3-219ENST00000600137 RAB13P51153 203 aa11.07□□□□□ -0.64
VRK3-219ENST00000600137 DYNLT3P51808 116 aa11.07□□□□□ -0.64
VRK3-219ENST00000600137 ZNF137PP52743 207 aa11.07□□□□□ -0.64
VRK3-219ENST00000600137 TAS2R20P59543 309 aa11.07□□□□□ -0.64
VRK3-219ENST00000600137 FBLN7Q53RD9 439 aa11.07□□□□□ -0.64
VRK3-219ENST00000600137 IGSF11Q5DX21 431 aa11.07□□□□□ -0.64
VRK3-219ENST00000600137 TPTE2P1Q5T6R2 138 aa11.07□□□□□ -0.64
VRK3-219ENST00000600137 RBMS3Q6XE24 437 aaKnown RBP11.07□□□□□ -0.64
VRK3-219ENST00000600137 ZFAND2BQ8WV99 257 aa11.07□□□□□ -0.64
VRK3-219ENST00000600137 SSMEM1Q8WWF3 244 aa11.07□□□□□ -0.64
VRK3-219ENST00000600137 JMJD8Q96S16 334 aa11.07□□□□□ -0.64
VRK3-219ENST00000600137 MDFIQ99750 246 aa11.07□□□□□ -0.64
VRK3-219ENST00000600137 SSX3Q99909 188 aa11.07□□□□□ -0.64
VRK3-219ENST00000600137 AGMATQ9BSE5 352 aa11.07□□□□□ -0.64
VRK3-219ENST00000600137 CABLES2Q9BTV7 478 aa11.07□□□□□ -0.64
VRK3-219ENST00000600137 CHIAQ9BZP6 476 aa11.07□□□□□ -0.64
VRK3-219ENST00000600137 RAB9BQ9NP90 201 aa11.07□□□□□ -0.64
VRK3-219ENST00000600137 CCDC59Q9P031 241 aaKnown RBP11.07□□□□□ -0.64
VRK3-219ENST00000600137 OR1A1Q9P1Q5 309 aa11.07□□□□□ -0.64
VRK3-219ENST00000600137 GNG12Q9UBI6 72 aa11.07□□□□□ -0.64
VRK3-219ENST00000600137 POMT1Q9Y6A1 747 aa11.07□□□□□ -0.64
VRK3-219ENST00000600137 TRBV6-7A0A0A0MS04 114 aa11.06□□□□□ -0.64
VRK3-219ENST00000600137 FABP7O15540 132 aa11.06□□□□□ -0.64
VRK3-219ENST00000600137 PROP1O75360 226 aa11.06□□□□□ -0.64
VRK3-219ENST00000600137 PITPNAQ00169 270 aa11.06□□□□□ -0.64
VRK3-219ENST00000600137 MZT2AQ6P582 158 aa11.06□□□□□ -0.64
VRK3-219ENST00000600137 CCBE1Q6UXH8 406 aaPredicted RBP11.06□□□□□ -0.64
VRK3-219ENST00000600137 GVQW1Q8N7I0 195 aa11.06□□□□□ -0.64
VRK3-219ENST00000600137 OR4A4PQ8NGN8 299 aa11.06□□□□□ -0.64
VRK3-219ENST00000600137 FAM216AQ8WUB2 273 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms