RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 RNF150Q9ULK6 438 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 FBXO7Q9Y3I1 522 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 A3GALT2U3KPV4 340 aa7.73□□□□□ -1.17
TRIM28-210ENST00000597618 GABRPO00591 440 aa7.72□□□□□ -1.17
TRIM28-210ENST00000597618 SLC16A6O15403 523 aa7.72□□□□□ -1.17
TRIM28-210ENST00000597618 MAGEB3O15480 346 aa7.72□□□□□ -1.17
TRIM28-210ENST00000597618 DCTN3O75935 186 aa7.72□□□□□ -1.17
TRIM28-210ENST00000597618 NDUFA3O95167 84 aa7.72□□□□□ -1.17
TRIM28-210ENST00000597618 HTR3BO95264 441 aa7.72□□□□□ -1.17
TRIM28-210ENST00000597618 RPSAP08865 295 aaKnown RBP7.72□□□□□ -1.17
TRIM28-210ENST00000597618 EPHA2P29317 976 aa7.72□□□□□ -1.17
TRIM28-210ENST00000597618 RBM11P57052 281 aaKnown RBP7.72□□□□□ -1.17
TRIM28-210ENST00000597618 ACTBL2Q562R1 376 aa7.72□□□□□ -1.17
TRIM28-210ENST00000597618 CD200R1LQ6Q8B3 271 aa7.72□□□□□ -1.17
TRIM28-210ENST00000597618 LINC00322Q6ZN03 302 aaPredicted RBP7.72□□□□□ -1.17
TRIM28-210ENST00000597618 ZNF497Q6ZNH5 498 aa7.72□□□□□ -1.17
TRIM28-210ENST00000597618 Q8N402 240 aa7.72□□□□□ -1.17
TRIM28-210ENST00000597618 STX19Q8N4C7 294 aa7.72□□□□□ -1.17
TRIM28-210ENST00000597618 PARP16Q8N5Y8 322 aa7.72□□□□□ -1.17
TRIM28-210ENST00000597618 OR9G4Q8NGQ1 327 aa7.72□□□□□ -1.17
TRIM28-210ENST00000597618 OR10K1Q8NGX5 313 aa7.72□□□□□ -1.17
TRIM28-210ENST00000597618 NEK7Q8TDX7 302 aa7.72□□□□□ -1.17
TRIM28-210ENST00000597618 ABHD5Q8WTS1 349 aa7.72□□□□□ -1.17
TRIM28-210ENST00000597618 RFKQ969G6 155 aa7.72□□□□□ -1.17
TRIM28-210ENST00000597618 RITA1Q96K30 269 aa7.72□□□□□ -1.17
TRIM28-210ENST00000597618 RHOVQ96L33 236 aa7.72□□□□□ -1.17
TRIM28-210ENST00000597618 MRPL20Q9BYC9 149 aaKnown RBP7.72□□□□□ -1.17
TRIM28-210ENST00000597618 ZNF581Q9P0T4 197 aa7.72□□□□□ -1.17
TRIM28-210ENST00000597618 ENOPH1Q9UHY7 261 aa7.72□□□□□ -1.17
TRIM28-210ENST00000597618 ST3GAL6Q9Y274 331 aa7.72□□□□□ -1.17
TRIM28-210ENST00000597618 OR4C45A6NMZ5 311 aa7.71□□□□□ -1.18
TRIM28-210ENST00000597618 MITFO75030 526 aaPredicted RBP7.71□□□□□ -1.18
TRIM28-210ENST00000597618 FKBP6O75344 327 aa7.71□□□□□ -1.18
TRIM28-210ENST00000597618 CNIH1O95406 144 aa7.71□□□□□ -1.18
TRIM28-210ENST00000597618 MT-ND4P03905 459 aa7.71□□□□□ -1.18
TRIM28-210ENST00000597618 RAB3AP20336 220 aa7.71□□□□□ -1.18
TRIM28-210ENST00000597618 CX3CL1P78423 397 aa7.71□□□□□ -1.18
TRIM28-210ENST00000597618 MPV17LQ2QL34 196 aa7.71□□□□□ -1.18
TRIM28-210ENST00000597618 MOGAT2Q3SYC2 334 aa7.71□□□□□ -1.18
TRIM28-210ENST00000597618 AKIRIN2Q53H80 203 aa7.71□□□□□ -1.18
TRIM28-210ENST00000597618 ATAD3CQ5T2N8 411 aa7.71□□□□□ -1.18
TRIM28-210ENST00000597618 C6orf183Q5T699 404 aa7.71□□□□□ -1.18
TRIM28-210ENST00000597618 TRAT1Q6PIZ9 186 aa7.71□□□□□ -1.18
TRIM28-210ENST00000597618 ASCL4Q6XD76 172 aa7.71□□□□□ -1.18
TRIM28-210ENST00000597618 PRR18Q8N4B5 295 aa7.71□□□□□ -1.18
TRIM28-210ENST00000597618 OR52N1Q8NH53 320 aa7.71□□□□□ -1.18
TRIM28-210ENST00000597618 MS4A10Q96PG2 267 aa7.71□□□□□ -1.18
TRIM28-210ENST00000597618 NABP2Q9BQ15 211 aa7.71□□□□□ -1.18
TRIM28-210ENST00000597618 ABHD14AQ9BUJ0 271 aa7.71□□□□□ -1.18
TRIM28-210ENST00000597618 ST6GALNAC5Q9BVH7 336 aa7.71□□□□□ -1.18
TRIM28-210ENST00000597618 PLEKHA3Q9HB20 300 aa7.71□□□□□ -1.18
TRIM28-210ENST00000597618 SIGLEC8Q9NYZ4 499 aa7.71□□□□□ -1.18
TRIM28-210ENST00000597618 CNOT2Q9NZN8 540 aaKnown RBP7.71□□□□□ -1.18
TRIM28-210ENST00000597618 TRAPPC2LQ9UL33 140 aa7.71□□□□□ -1.18
TRIM28-210ENST00000597618 ARL2BPQ9Y2Y0 163 aa7.71□□□□□ -1.18
TRIM28-210ENST00000597618 NUBP2Q9Y5Y2 271 aa7.71□□□□□ -1.18
TRIM28-210ENST00000597618 C13orf42A0A1B0GVH6 325 aa7.7□□□□□ -1.18
TRIM28-210ENST00000597618 NUPR2A6NF83 97 aa7.7□□□□□ -1.18
TRIM28-210ENST00000597618 GEMIN2O14893 280 aaKnown RBP7.7□□□□□ -1.18
TRIM28-210ENST00000597618 TPPPO94811 219 aa7.7□□□□□ -1.18
TRIM28-210ENST00000597618 BRI3O95415 125 aa7.7□□□□□ -1.18
TRIM28-210ENST00000597618 HBZP02008 142 aa7.7□□□□□ -1.18
TRIM28-210ENST00000597618 TRGV3P03979 118 aa7.7□□□□□ -1.18
TRIM28-210ENST00000597618 TFAP2AP05549 437 aa7.7□□□□□ -1.18
TRIM28-210ENST00000597618 EGR2P11161 476 aaPredicted RBP7.7□□□□□ -1.18
TRIM28-210ENST00000597618 CD81P60033 236 aa7.7□□□□□ -1.18
TRIM28-210ENST00000597618 ALKBH1Q13686 389 aaKnown RBP7.7□□□□□ -1.18
TRIM28-210ENST00000597618 KLF5Q13887 457 aaPredicted RBP7.7□□□□□ -1.18
TRIM28-210ENST00000597618 PLGLAQ15195 96 aa7.7□□□□□ -1.18
TRIM28-210ENST00000597618 SYT6Q5T7P8 510 aaPredicted RBP7.7□□□□□ -1.18
TRIM28-210ENST00000597618 UNQ5815/PRO19632Q6UWF5 114 aa7.7□□□□□ -1.18
TRIM28-210ENST00000597618 IL34Q6ZMJ4 242 aa7.7□□□□□ -1.18
TRIM28-210ENST00000597618 PPP1R27Q86WC6 154 aa7.7□□□□□ -1.18
TRIM28-210ENST00000597618 OR8J1Q8NGP2 316 aa7.7□□□□□ -1.18
TRIM28-210ENST00000597618 TSEN15Q8WW01 171 aaKnown RBP7.7□□□□□ -1.18
TRIM28-210ENST00000597618 PELI1Q96FA3 418 aa7.7□□□□□ -1.18
TRIM28-210ENST00000597618 METTL9Q9H1A3 318 aa7.7□□□□□ -1.18
TRIM28-210ENST00000597618 ETAA1Q9NY74 926 aa7.7□□□□□ -1.18
TRIM28-210ENST00000597618 IL36GQ9NZH8 169 aa7.7□□□□□ -1.18
TRIM28-210ENST00000597618 DAPL1A0PJW8 107 aa7.69□□□□□ -1.18
TRIM28-210ENST00000597618 CXorf65A6NEN9 183 aa7.69□□□□□ -1.18
TRIM28-210ENST00000597618 RRHO14718 337 aa7.69□□□□□ -1.18
TRIM28-210ENST00000597618 FSTP19883 344 aa7.69□□□□□ -1.18
TRIM28-210ENST00000597618 SYNJ2BPP57105 145 aa7.69□□□□□ -1.18
TRIM28-210ENST00000597618 ZNF529Q6P280 563 aa7.69□□□□□ -1.18
TRIM28-210ENST00000597618 ZNF833PQ6ZTB9 187 aa7.69□□□□□ -1.18
TRIM28-210ENST00000597618 SPATA24Q86W54 205 aa7.69□□□□□ -1.18
TRIM28-210ENST00000597618 LAX1Q8IWV1 398 aa7.69□□□□□ -1.18
TRIM28-210ENST00000597618 OR2K2Q8NGT1 345 aa7.69□□□□□ -1.18
TRIM28-210ENST00000597618 OR1L1Q8NH94 360 aa7.69□□□□□ -1.18
TRIM28-210ENST00000597618 RGP1Q92546 391 aaPredicted RBP7.69□□□□□ -1.18
TRIM28-210ENST00000597618 S100A13Q99584 98 aa7.69□□□□□ -1.18
TRIM28-210ENST00000597618 FAM103A1Q9BTL3 118 aaKnown RBP7.69□□□□□ -1.18
TRIM28-210ENST00000597618 JAM3Q9BX67 310 aa7.69□□□□□ -1.18
TRIM28-210ENST00000597618 FBXL15Q9H469 300 aa7.69□□□□□ -1.18
TRIM28-210ENST00000597618 RIBC2Q9H4K1 309 aa7.69□□□□□ -1.18
TRIM28-210ENST00000597618 SPACA1Q9HBV2 294 aa7.69□□□□□ -1.18
TRIM28-210ENST00000597618 MED4Q9NPJ6 270 aa7.69□□□□□ -1.18
TRIM28-210ENST00000597618 OR2S2Q9NQN1 319 aa7.69□□□□□ -1.18
TRIM28-210ENST00000597618 PAK1IP1Q9NWT1 392 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms