RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 IDI2-AS1Q9NZ38 188 aa12.04□□□□□ -0.48
LIG1-214ENST00000597146 KMT2AQ03164 3969 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 TMEM30CPA0ZSE6 113 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 FAM90A18PA6NE21 464 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 FAM90A16PA6NEW6 464 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 FAM90A20PA6NIJ5 464 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 FAM90A9PA6NNJ1 464 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 FAM90A12PA8MX19 464 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 FAM90A5PA8MXJ8 464 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 LY6LH3BQJ8 138 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 FAM90A15PP0C7V4 464 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 FAM90A13PP0C7W8 464 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 FAM90A14PP0C7W9 464 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 FAM90A24PP0C7X0 464 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 IGHV4-30-4P0DP06 118 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 TMEM11P17152 192 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 FSTP19883 344 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 GPR50Q13585 617 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 HES1Q14469 280 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 HNF4GQ14541 408 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 GLT8D1Q68CQ7 371 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 IZUMO2Q6UXV1 221 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 NKAIN3Q8N8D7 197 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 OR9G1Q8NH87 305 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 CCDC107Q8WV48 283 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 UFD1Q92890 307 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 CNBD2Q96M20 576 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 SELENOIQ9C0D9 397 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 NCOR1P1Q9H4R4 102 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 BANF2Q9H503 90 aa12.03□□□□□ -0.48
LIG1-214ENST00000597146 AMMECR1Q9Y4X0 333 aaPredicted RBP12.03□□□□□ -0.48
LIG1-214ENST00000597146 TRAV39A0A0B4J263 110 aa12.02□□□□□ -0.49
LIG1-214ENST00000597146 SAP30O75446 220 aa12.02□□□□□ -0.49
LIG1-214ENST00000597146 IGHV3-7P01780 117 aa12.02□□□□□ -0.49
LIG1-214ENST00000597146 FOXE3Q13461 319 aa12.02□□□□□ -0.49
LIG1-214ENST00000597146 C17orf58Q2M2W7 97 aa12.02□□□□□ -0.49
LIG1-214ENST00000597146 HSD17B12Q53GQ0 312 aa12.02□□□□□ -0.49
LIG1-214ENST00000597146 NHLRC3Q5JS37 347 aa12.02□□□□□ -0.49
LIG1-214ENST00000597146 RBM48Q5RL73 367 aaKnown RBP12.02□□□□□ -0.49
LIG1-214ENST00000597146 CCDC144NLQ6NUI1 221 aa12.02□□□□□ -0.49
LIG1-214ENST00000597146 ZNF429Q86V71 674 aa12.02□□□□□ -0.49
LIG1-214ENST00000597146 RNF152Q8N8N0 203 aa12.02□□□□□ -0.49
LIG1-214ENST00000597146 OR13A1Q8NGR1 328 aa12.02□□□□□ -0.49
LIG1-214ENST00000597146 PLPPR1Q8TBJ4 325 aa12.02□□□□□ -0.49
LIG1-214ENST00000597146 ARL11Q969Q4 196 aa12.02□□□□□ -0.49
LIG1-214ENST00000597146 TMEM203Q969S6 136 aa12.02□□□□□ -0.49
LIG1-214ENST00000597146 RPEQ96AT9 228 aa12.02□□□□□ -0.49
LIG1-214ENST00000597146 SPATA25Q9BR10 227 aa12.02□□□□□ -0.49
LIG1-214ENST00000597146 RAB9BQ9NP90 201 aa12.02□□□□□ -0.49
LIG1-214ENST00000597146 TRAPPC2LQ9UL33 140 aa12.02□□□□□ -0.49
LIG1-214ENST00000597146 BLOC1S6Q9UL45 172 aa12.02□□□□□ -0.49
LIG1-214ENST00000597146 PEX16Q9Y5Y5 336 aa12.02□□□□□ -0.49
LIG1-214ENST00000597146 MAGEA13PA6NCF6 341 aa12.01□□□□□ -0.49
LIG1-214ENST00000597146 AP4M1O00189 453 aa12.01□□□□□ -0.49
LIG1-214ENST00000597146 FGF16O43320 207 aa12.01□□□□□ -0.49
LIG1-214ENST00000597146 RSBN1Q5VWQ0 802 aaPredicted RBP12.01□□□□□ -0.49
LIG1-214ENST00000597146 LIPKQ5VXJ0 399 aa12.01□□□□□ -0.49
LIG1-214ENST00000597146 RAB12Q6IQ22 244 aa12.01□□□□□ -0.49
LIG1-214ENST00000597146 OR10X1Q8NGY0 326 aa12.01□□□□□ -0.49
LIG1-214ENST00000597146 LINC00476Q8WZB0 136 aa12.01□□□□□ -0.49
LIG1-214ENST00000597146 TOMM40LQ969M1 308 aa12.01□□□□□ -0.49
LIG1-214ENST00000597146 UQCC2Q9BRT2 126 aa12.01□□□□□ -0.49
LIG1-214ENST00000597146 CST11Q9H112 138 aa12.01□□□□□ -0.49
LIG1-214ENST00000597146 ETAA1Q9NY74 926 aa12.01□□□□□ -0.49
LIG1-214ENST00000597146 GHRLQ9UBU3 117 aa12.01□□□□□ -0.49
LIG1-214ENST00000597146 ABCA13Q86UQ4 5058 aa12□□□□□ -0.49
LIG1-214ENST00000597146 A0A1W2PP11 408 aa12□□□□□ -0.49
LIG1-214ENST00000597146 A0A1W2PPI3 338 aa12□□□□□ -0.49
LIG1-214ENST00000597146 AIPO00170 330 aa12□□□□□ -0.49
LIG1-214ENST00000597146 IL1AP01583 271 aa12□□□□□ -0.49
LIG1-214ENST00000597146 ELANEP08246 267 aa12□□□□□ -0.49
LIG1-214ENST00000597146 OR8U8P0C7N1 319 aa12□□□□□ -0.49
LIG1-214ENST00000597146 UBBP0CG47 229 aa12□□□□□ -0.49
LIG1-214ENST00000597146 MGMTP16455 207 aa12□□□□□ -0.49
LIG1-214ENST00000597146 SRMP19623 302 aa12□□□□□ -0.49
LIG1-214ENST00000597146 CD34P28906 385 aa12□□□□□ -0.49
LIG1-214ENST00000597146 GPR12P47775 334 aa12□□□□□ -0.49
LIG1-214ENST00000597146 GNG10P50151 68 aa12□□□□□ -0.49
LIG1-214ENST00000597146 TRAM1Q15629 374 aa12□□□□□ -0.49
LIG1-214ENST00000597146 THNSL2Q86YJ6 484 aa12□□□□□ -0.49
LIG1-214ENST00000597146 OR10A7Q8NGE5 316 aa12□□□□□ -0.49
LIG1-214ENST00000597146 DCUN1D4Q92564 292 aa12□□□□□ -0.49
LIG1-214ENST00000597146 LEAP2Q969E1 77 aa12□□□□□ -0.49
LIG1-214ENST00000597146 FAM46BQ96A09 425 aa12□□□□□ -0.49
LIG1-214ENST00000597146 KIRREL1Q96J84 757 aa12□□□□□ -0.49
LIG1-214ENST00000597146 NEDD4LQ96PU5 975 aa12□□□□□ -0.49
LIG1-214ENST00000597146 ANKRD60Q9BZ19 345 aa12□□□□□ -0.49
LIG1-214ENST00000597146 Q9H521 79 aa12□□□□□ -0.49
LIG1-214ENST00000597146 DUSP21Q9H596 190 aa12□□□□□ -0.49
LIG1-214ENST00000597146 IFT22Q9H7X7 185 aa12□□□□□ -0.49
LIG1-214ENST00000597146 GNB4Q9HAV0 340 aa12□□□□□ -0.49
LIG1-214ENST00000597146 KCNIP1Q9NZI2 227 aa12□□□□□ -0.49
LIG1-214ENST00000597146 OOSP1A8MZH6 123 aa11.99□□□□□ -0.49
LIG1-214ENST00000597146 J3QR06 171 aa11.99□□□□□ -0.49
LIG1-214ENST00000597146 SDCBPO00560 298 aaPredicted RBP11.99□□□□□ -0.49
LIG1-214ENST00000597146 SPINT2O43291 252 aa11.99□□□□□ -0.49
LIG1-214ENST00000597146 IGKV1D-33P01593 117 aa11.99□□□□□ -0.49
LIG1-214ENST00000597146 IGKV1-33P01594 117 aa11.99□□□□□ -0.49
LIG1-214ENST00000597146 MT-ND4P03905 459 aa11.99□□□□□ -0.49
LIG1-214ENST00000597146 FUT3P21217 361 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms