RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 ZNF69Q9UC07 566 aa12.26□□□□□ -0.45
TRIM28-207ENST00000597136 KPTNQ9Y664 436 aa12.26□□□□□ -0.45
TRIM28-207ENST00000597136 CENPVL3A0A0U1RRI6 287 aa12.26□□□□□ -0.45
TRIM28-207ENST00000597136 KBTBD11-OT1A0A1B0GTJ5 212 aa12.26□□□□□ -0.45
TRIM28-207ENST00000597136 C15orf65H3BRN8 121 aa12.26□□□□□ -0.45
TRIM28-207ENST00000597136 FABP7O15540 132 aa12.26□□□□□ -0.45
TRIM28-207ENST00000597136 SSTR5P35346 364 aa12.26□□□□□ -0.45
TRIM28-207ENST00000597136 INPP1P49441 399 aa12.26□□□□□ -0.45
TRIM28-207ENST00000597136 TAS2R46P59540 309 aa12.26□□□□□ -0.45
TRIM28-207ENST00000597136 TAS2R19P59542 299 aa12.26□□□□□ -0.45
TRIM28-207ENST00000597136 KLRD1Q13241 179 aa12.26□□□□□ -0.45
TRIM28-207ENST00000597136 C17orf58Q2M2W7 97 aa12.26□□□□□ -0.45
TRIM28-207ENST00000597136 RUSC1-AS1Q66K80 236 aa12.26□□□□□ -0.45
TRIM28-207ENST00000597136 BRD3OSQ6XYD6 125 aa12.26□□□□□ -0.45
TRIM28-207ENST00000597136 PRR18Q8N4B5 295 aa12.26□□□□□ -0.45
TRIM28-207ENST00000597136 OR5AP2Q8NGF4 316 aa12.26□□□□□ -0.45
TRIM28-207ENST00000597136 TNFRSF14Q92956 283 aa12.26□□□□□ -0.45
TRIM28-207ENST00000597136 ARL11Q969Q4 196 aa12.26□□□□□ -0.45
TRIM28-207ENST00000597136 DMRTB1Q96MA1 342 aa12.26□□□□□ -0.45
TRIM28-207ENST00000597136 LINC00574Q9H8X3 128 aa12.26□□□□□ -0.45
TRIM28-207ENST00000597136 TAS2R3Q9NYW6 316 aa12.26□□□□□ -0.45
TRIM28-207ENST00000597136 CALYQ9NYX4 217 aa12.26□□□□□ -0.45
TRIM28-207ENST00000597136 COL6A5A8TX70 2615 aa12.26□□□□□ -0.45
TRIM28-207ENST00000597136 FBN1P35555 2871 aaKnown RBP12.25□□□□□ -0.45
TRIM28-207ENST00000597136 IGKV1-6A0A0C4DH72 117 aa12.25□□□□□ -0.45
TRIM28-207ENST00000597136 LINC00854A0A1B0GVQ3 168 aa12.25□□□□□ -0.45
TRIM28-207ENST00000597136 ZNF729A6NN14 1252 aaPredicted RBP12.25□□□□□ -0.45
TRIM28-207ENST00000597136 SPINT2O43291 252 aa12.25□□□□□ -0.45
TRIM28-207ENST00000597136 HBZP02008 142 aa12.25□□□□□ -0.45
TRIM28-207ENST00000597136 CD74P04233 296 aa12.25□□□□□ -0.45
TRIM28-207ENST00000597136 ZNF728P0DKX0 622 aa12.25□□□□□ -0.45
TRIM28-207ENST00000597136 TBPP20226 339 aa12.25□□□□□ -0.45
TRIM28-207ENST00000597136 EPHA1P21709 976 aa12.25□□□□□ -0.45
TRIM28-207ENST00000597136 HRH1P35367 487 aa12.25□□□□□ -0.45
TRIM28-207ENST00000597136 RFX2P48378 723 aa12.25□□□□□ -0.45
TRIM28-207ENST00000597136 ARPC4P59998 168 aa12.25□□□□□ -0.45
TRIM28-207ENST00000597136 DCTN2Q13561 401 aaKnown RBP12.25□□□□□ -0.45
TRIM28-207ENST00000597136 HERPUD1Q15011 391 aa12.25□□□□□ -0.45
TRIM28-207ENST00000597136 IGSF11Q5DX21 431 aa12.25□□□□□ -0.45
TRIM28-207ENST00000597136 STEAP1BQ6NZ63 245 aa12.25□□□□□ -0.45
TRIM28-207ENST00000597136 C1orf122Q6ZSJ8 110 aa12.25□□□□□ -0.45
TRIM28-207ENST00000597136 KIR3DL3Q8N743 410 aa12.25□□□□□ -0.45
TRIM28-207ENST00000597136 OR4A4PQ8NGN8 299 aa12.25□□□□□ -0.45
TRIM28-207ENST00000597136 OR1L1Q8NH94 360 aa12.25□□□□□ -0.45
TRIM28-207ENST00000597136 RFESDQ8TAC1 157 aa12.25□□□□□ -0.45
TRIM28-207ENST00000597136 UBALD1Q8TB05 177 aa12.25□□□□□ -0.45
TRIM28-207ENST00000597136 ZNF714Q96N38 554 aa12.25□□□□□ -0.45
TRIM28-207ENST00000597136 NUP50Q9UKX7 468 aa12.25□□□□□ -0.45
TRIM28-207ENST00000597136 A0A1W2PRD5 423 aa12.24□□□□□ -0.45
TRIM28-207ENST00000597136 A0A1W2PRF3 423 aa12.24□□□□□ -0.45
TRIM28-207ENST00000597136 A0A1W2PRM7 423 aa12.24□□□□□ -0.45
TRIM28-207ENST00000597136 NPIPB11E5RHQ5 1161 aa12.24□□□□□ -0.45
TRIM28-207ENST00000597136 RNASEK-C17orf49H0YIS7 233 aa12.24□□□□□ -0.45
TRIM28-207ENST00000597136 M0QYG6 137 aa12.24□□□□□ -0.45
TRIM28-207ENST00000597136 M0R1W7 72 aa12.24□□□□□ -0.45
TRIM28-207ENST00000597136 PLA2G10O15496 165 aa12.24□□□□□ -0.45
TRIM28-207ENST00000597136 MMP23AO75900 390 aa12.24□□□□□ -0.45
TRIM28-207ENST00000597136 PMP2P02689 132 aa12.24□□□□□ -0.45
TRIM28-207ENST00000597136 AKAIN1P0CW23 69 aa12.24□□□□□ -0.45
TRIM28-207ENST00000597136 OR3A3P47888 321 aa12.24□□□□□ -0.45
TRIM28-207ENST00000597136 SRSF2Q01130 221 aaKnown RBP12.24□□□□□ -0.45
TRIM28-207ENST00000597136 DYRK1AQ13627 763 aa12.24□□□□□ -0.45
TRIM28-207ENST00000597136 CDK10Q15131 360 aa12.24□□□□□ -0.45
TRIM28-207ENST00000597136 ACTBL2Q562R1 376 aa12.24□□□□□ -0.45
TRIM28-207ENST00000597136 HCP5Q6MZN7 132 aa12.24□□□□□ -0.45
TRIM28-207ENST00000597136 PNKDQ8N490 385 aa12.24□□□□□ -0.45
TRIM28-207ENST00000597136 OR4D10Q8NGI6 311 aa12.24□□□□□ -0.45
TRIM28-207ENST00000597136 OR5H2Q8NGV7 314 aa12.24□□□□□ -0.45
TRIM28-207ENST00000597136 DEDD2Q8WXF8 326 aa12.24□□□□□ -0.45
TRIM28-207ENST00000597136 KIRREL1Q96J84 757 aa12.24□□□□□ -0.45
TRIM28-207ENST00000597136 TINAGL1Q9GZM7 467 aaPredicted RBP12.24□□□□□ -0.45
TRIM28-207ENST00000597136 GAL3ST2Q9H3Q3 398 aa12.24□□□□□ -0.45
TRIM28-207ENST00000597136 PALMDQ9NP74 551 aa12.24□□□□□ -0.45
TRIM28-207ENST00000597136 C17orf98A8MV24 154 aa12.23□□□□□ -0.45
TRIM28-207ENST00000597136 SDCBPO00560 298 aaPredicted RBP12.23□□□□□ -0.45
TRIM28-207ENST00000597136 RAB3DO95716 219 aa12.23□□□□□ -0.45
TRIM28-207ENST00000597136 CTXN2P0C2S0 81 aa12.23□□□□□ -0.45
TRIM28-207ENST00000597136 RNASE10Q5GAN6 216 aaKnown RBP12.23□□□□□ -0.45
TRIM28-207ENST00000597136 OVCH2Q7RTZ1 564 aa12.23□□□□□ -0.45
TRIM28-207ENST00000597136 OR4C16Q8NGL9 310 aa12.23□□□□□ -0.45
TRIM28-207ENST00000597136 IL1F10Q8WWZ1 152 aa12.23□□□□□ -0.45
TRIM28-207ENST00000597136 GALMQ96C23 342 aa12.23□□□□□ -0.45
TRIM28-207ENST00000597136 CABLES2Q9BTV7 478 aa12.23□□□□□ -0.45
TRIM28-207ENST00000597136 HRASLSQ9HDD0 168 aa12.23□□□□□ -0.45
TRIM28-207ENST00000597136 RAB9BQ9NP90 201 aa12.23□□□□□ -0.45
TRIM28-207ENST00000597136 NECAP2Q9NVZ3 263 aa12.23□□□□□ -0.45
TRIM28-207ENST00000597136 TBC1D24Q9ULP9 559 aa12.23□□□□□ -0.45
TRIM28-207ENST00000597136 A0A1W2PPH5 198 aa12.22□□□□□ -0.45
TRIM28-207ENST00000597136 F2RL2O00254 374 aa12.22□□□□□ -0.45
TRIM28-207ENST00000597136 BET1O15155 118 aa12.22□□□□□ -0.45
TRIM28-207ENST00000597136 DIRAS3O95661 229 aa12.22□□□□□ -0.45
TRIM28-207ENST00000597136 OR5H8P0DN80 308 aa12.22□□□□□ -0.45
TRIM28-207ENST00000597136 OMGP23515 440 aa12.22□□□□□ -0.45
TRIM28-207ENST00000597136 PRTN3P24158 256 aa12.22□□□□□ -0.45
TRIM28-207ENST00000597136 HTD2P86397 168 aa12.22□□□□□ -0.45
TRIM28-207ENST00000597136 VAX1Q5SQQ9 334 aa12.22□□□□□ -0.45
TRIM28-207ENST00000597136 FAAP20Q6NZ36 180 aa12.22□□□□□ -0.45
TRIM28-207ENST00000597136 HEPN1Q6WQI6 88 aa12.22□□□□□ -0.45
TRIM28-207ENST00000597136 ZNF782Q6ZMW2 699 aaPredicted RBP12.22□□□□□ -0.45
TRIM28-207ENST00000597136 SLC6A7Q99884 636 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms