RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 C3orf56Q8N813 242 aa8.94□□□□□ -0.98
LIG1-211ENST00000596457 OR52M1Q8NGK5 317 aa8.94□□□□□ -0.98
LIG1-211ENST00000596457 RPEQ96AT9 228 aa8.94□□□□□ -0.98
LIG1-211ENST00000596457 CREB3L1Q96BA8 519 aa8.94□□□□□ -0.98
LIG1-211ENST00000596457 PHF21AQ96BD5 680 aa8.94□□□□□ -0.98
LIG1-211ENST00000596457 GALMQ96C23 342 aa8.94□□□□□ -0.98
LIG1-211ENST00000596457 NAA50Q9GZZ1 169 aaKnown RBP8.94□□□□□ -0.98
LIG1-211ENST00000596457 RIMS4Q9H426 269 aaPredicted RBP8.94□□□□□ -0.98
LIG1-211ENST00000596457 MBNL3Q9NUK0 354 aaKnown RBP8.94□□□□□ -0.98
LIG1-211ENST00000596457 C1RLQ9NZP8 487 aa8.94□□□□□ -0.98
LIG1-211ENST00000596457 NAPSAO96009 420 aa8.93□□□□□ -0.98
LIG1-211ENST00000596457 BRS3P32247 399 aa8.93□□□□□ -0.98
LIG1-211ENST00000596457 PPP1CCP36873 323 aaKnown RBP8.93□□□□□ -0.98
LIG1-211ENST00000596457 TALDO1P37837 337 aa8.93□□□□□ -0.98
LIG1-211ENST00000596457 MNDAP41218 407 aa8.93□□□□□ -0.98
LIG1-211ENST00000596457 REG1BP48304 166 aa8.93□□□□□ -0.98
LIG1-211ENST00000596457 ARHGDIBP52566 201 aa8.93□□□□□ -0.98
LIG1-211ENST00000596457 RAG2P55895 527 aa8.93□□□□□ -0.98
LIG1-211ENST00000596457 DIAPH2-AS1Q14236 149 aa8.93□□□□□ -0.98
LIG1-211ENST00000596457 HMGN3Q15651 99 aa8.93□□□□□ -0.98
LIG1-211ENST00000596457 CDNFQ49AH0 187 aa8.93□□□□□ -0.98
LIG1-211ENST00000596457 SLC16A12Q6ZSM3 486 aa8.93□□□□□ -0.98
LIG1-211ENST00000596457 GPR141Q7Z602 305 aa8.93□□□□□ -0.98
LIG1-211ENST00000596457 MOB3BQ86TA1 216 aa8.93□□□□□ -0.98
LIG1-211ENST00000596457 PIFOQ8TCI5 191 aa8.93□□□□□ -0.98
LIG1-211ENST00000596457 CAPSLQ8WWF8 208 aa8.93□□□□□ -0.98
LIG1-211ENST00000596457 MAFIPQ8WZ33 124 aa8.93□□□□□ -0.98
LIG1-211ENST00000596457 PTX4Q96A99 478 aa8.93□□□□□ -0.98
LIG1-211ENST00000596457 ELF5Q9UKW6 265 aaPredicted RBP8.93□□□□□ -0.98
LIG1-211ENST00000596457 LY6LH3BQJ8 138 aa8.92□□□□□ -0.98
LIG1-211ENST00000596457 RAB27BO00194 218 aa8.92□□□□□ -0.98
LIG1-211ENST00000596457 SCTP09683 121 aa8.92□□□□□ -0.98
LIG1-211ENST00000596457 HIST1H1DP16402 221 aaKnown RBP8.92□□□□□ -0.98
LIG1-211ENST00000596457 IL3RAP26951 378 aa8.92□□□□□ -0.98
LIG1-211ENST00000596457 ZNF134P52741 427 aa8.92□□□□□ -0.98
LIG1-211ENST00000596457 HLA-DRB3P79483 266 aa8.92□□□□□ -0.98
LIG1-211ENST00000596457 RELBQ01201 579 aa8.92□□□□□ -0.98
LIG1-211ENST00000596457 MADCAM1Q13477 382 aa8.92□□□□□ -0.98
LIG1-211ENST00000596457 HES1Q14469 280 aa8.92□□□□□ -0.98
LIG1-211ENST00000596457 AANATQ16613 207 aa8.92□□□□□ -0.98
LIG1-211ENST00000596457 MORN2Q502X0 79 aa8.92□□□□□ -0.98
LIG1-211ENST00000596457 ZNF880Q6PDB4 577 aa8.92□□□□□ -0.98
LIG1-211ENST00000596457 CCBE1Q6UXH8 406 aaPredicted RBP8.92□□□□□ -0.98
LIG1-211ENST00000596457 Q6ZPA2 131 aa8.92□□□□□ -0.98
LIG1-211ENST00000596457 Q6ZSV7 163 aa8.92□□□□□ -0.98
LIG1-211ENST00000596457 MOB1BQ7L9L4 216 aa8.92□□□□□ -0.98
LIG1-211ENST00000596457 LYG1Q8N1E2 194 aa8.92□□□□□ -0.98
LIG1-211ENST00000596457 DTX3Q8N9I9 347 aa8.92□□□□□ -0.98
LIG1-211ENST00000596457 OR4F5Q8NH21 305 aa8.92□□□□□ -0.98
LIG1-211ENST00000596457 SGMS2Q8NHU3 365 aa8.92□□□□□ -0.98
LIG1-211ENST00000596457 BEX1Q9HBH7 125 aa8.92□□□□□ -0.98
LIG1-211ENST00000596457 Q9N2K0 584 aa8.92□□□□□ -0.98
LIG1-211ENST00000596457 C12orf4Q9NQ89 552 aa8.92□□□□□ -0.98
LIG1-211ENST00000596457 RHBDL2Q9NX52 303 aa8.92□□□□□ -0.98
LIG1-211ENST00000596457 ZNF230Q9UIE0 474 aaPredicted RBP8.92□□□□□ -0.98
LIG1-211ENST00000596457 PITPNC1Q9UKF7 332 aa8.92□□□□□ -0.98
LIG1-211ENST00000596457 TCF19Q9Y242 345 aa8.92□□□□□ -0.98
LIG1-211ENST00000596457 KCNK7Q9Y2U2 307 aa8.92□□□□□ -0.98
LIG1-211ENST00000596457 TRAV18A0A075B6X5 111 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 A6NDX4 124 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 VGLL3A8MV65 326 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 MFNGO00587 321 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 HSD17B6O14756 317 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 HSPA12AO43301 675 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 CHST1O43916 411 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 RGS11O94810 467 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 GAPDHP04406 335 aaKnown RBP8.91□□□□□ -0.98
LIG1-211ENST00000596457 TFAP2AP05549 437 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 ALDH3B2P48448 385 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 HTD2P86397 168 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 HNF4GQ14541 408 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 TMEM30BQ3MIR4 351 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 ARSJQ5FYB0 599 aaPredicted RBP8.91□□□□□ -0.98
LIG1-211ENST00000596457 CT45A1Q5HYN5 189 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 CCDC144NLQ6NUI1 221 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 ZNF554Q86TJ5 538 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 ANKRD13BQ86YJ7 626 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 CROCCP3Q8IVE0 287 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 LINC00311Q8N616 119 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 DRAM1Q8N682 238 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 CT45A3Q8NHU0 189 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 OCSTAMPQ9BR26 566 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 RAB18Q9NP72 206 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 OR1A1Q9P1Q5 309 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 SLC23A1Q9UHI7 598 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 JPT1Q9UK76 154 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 MGAT4AQ9UM21 535 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 SPATA2Q9UM82 520 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 ETV7Q9Y603 341 aa8.91□□□□□ -0.98
LIG1-211ENST00000596457 TRBV6-6A0A0A6YYG2 114 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 IGHV3-72A0A0B4J1Y9 119 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 TMEM235A6NFC5 223 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 OOSP1A8MZH6 123 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 TRDCB7Z8K6 153 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 TIMM23O14925 209 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 BET1O15155 118 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 ST8SIA5O15466 376 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 YPEL1O60688 119 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 NDUFA7O95182 113 aa8.9□□□□□ -0.98
LIG1-211ENST00000596457 SNRNP70P08621 437 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms