RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 SLC2A2P11168 524 aaPredicted RBP13.92□□□□□ -0.18
SHKBP1-212ENST00000596163 MXD1Q05195 221 aa13.92□□□□□ -0.18
SHKBP1-212ENST00000596163 STEAP3Q658P3 488 aa13.92□□□□□ -0.18
SHKBP1-212ENST00000596163 SFXN4Q6P4A7 337 aa13.92□□□□□ -0.18
SHKBP1-212ENST00000596163 ZNF880Q6PDB4 577 aa13.92□□□□□ -0.18
SHKBP1-212ENST00000596163 SHISA2Q6UWI4 295 aa13.92□□□□□ -0.18
SHKBP1-212ENST00000596163 Q6ZSV7 163 aa13.92□□□□□ -0.18
SHKBP1-212ENST00000596163 NR2C2APQ86WQ0 139 aa13.92□□□□□ -0.18
SHKBP1-212ENST00000596163 CROCCP3Q8IVE0 287 aa13.92□□□□□ -0.18
SHKBP1-212ENST00000596163 OR10R2Q8NGX6 335 aa13.92□□□□□ -0.18
SHKBP1-212ENST00000596163 CAPSLQ8WWF8 208 aa13.92□□□□□ -0.18
SHKBP1-212ENST00000596163 YIPF6Q96EC8 236 aa13.92□□□□□ -0.18
SHKBP1-212ENST00000596163 CMSS1Q9BQ75 279 aaKnown RBP13.92□□□□□ -0.18
SHKBP1-212ENST00000596163 CENPOQ9BU64 300 aa13.92□□□□□ -0.18
SHKBP1-212ENST00000596163 C12orf4Q9NQ89 552 aa13.92□□□□□ -0.18
SHKBP1-212ENST00000596163 AK3Q9UIJ7 227 aa13.92□□□□□ -0.18
SHKBP1-212ENST00000596163 JPT1Q9UK76 154 aa13.92□□□□□ -0.18
SHKBP1-212ENST00000596163 SMIM30A4D0T7 59 aa13.91□□□□□ -0.18
SHKBP1-212ENST00000596163 GAPDHP04406 335 aaKnown RBP13.91□□□□□ -0.18
SHKBP1-212ENST00000596163 CD3GP09693 182 aa13.91□□□□□ -0.18
SHKBP1-212ENST00000596163 SCAND1P57086 179 aa13.91□□□□□ -0.18
SHKBP1-212ENST00000596163 HMGN3Q15651 99 aa13.91□□□□□ -0.18
SHKBP1-212ENST00000596163 UTF1Q5T230 341 aa13.91□□□□□ -0.18
SHKBP1-212ENST00000596163 C16orf82Q7Z2V1 217 aa13.91□□□□□ -0.18
SHKBP1-212ENST00000596163 OR8H3Q8N146 312 aa13.91□□□□□ -0.18
SHKBP1-212ENST00000596163 TAF15Q92804 592 aaKnown RBP eCLIP13.91□□□□□ -0.18
SHKBP1-212ENST00000596163 AKR1E2Q96JD6 320 aa13.91□□□□□ -0.18
SHKBP1-212ENST00000596163 ATG5Q9H1Y0 275 aa13.91□□□□□ -0.18
SHKBP1-212ENST00000596163 RNF114Q9Y508 228 aa13.91□□□□□ -0.18
SHKBP1-212ENST00000596163 A0A1W2PPE3 182 aa13.9□□□□□ -0.18
SHKBP1-212ENST00000596163 YPEL1O60688 119 aa13.9□□□□□ -0.18
SHKBP1-212ENST00000596163 FAM106CPP0CH98 169 aa13.9□□□□□ -0.18
SHKBP1-212ENST00000596163 KIR2DS4P43632 304 aa13.9□□□□□ -0.18
SHKBP1-212ENST00000596163 EFNB2P52799 333 aa13.9□□□□□ -0.18
SHKBP1-212ENST00000596163 PLAC9Q5JTB6 97 aa13.9□□□□□ -0.18
SHKBP1-212ENST00000596163 LY6G6FQ5SQ64 297 aa13.9□□□□□ -0.18
SHKBP1-212ENST00000596163 C11orf88Q6PI97 169 aa13.9□□□□□ -0.18
SHKBP1-212ENST00000596163 SLC25A48Q6ZT89 311 aaKnown RBP13.9□□□□□ -0.18
SHKBP1-212ENST00000596163 THNSL2Q86YJ6 484 aa13.9□□□□□ -0.18
SHKBP1-212ENST00000596163 OR10V1Q8NGI7 309 aa13.9□□□□□ -0.18
SHKBP1-212ENST00000596163 LINC01006Q8NI28 216 aa13.9□□□□□ -0.18
SHKBP1-212ENST00000596163 YPEL2Q96QA6 119 aa13.9□□□□□ -0.18
SHKBP1-212ENST00000596163 RNF167Q9H6Y7 350 aa13.9□□□□□ -0.18
SHKBP1-212ENST00000596163 A0A0B4J203 849 aa13.89□□□□□ -0.19
SHKBP1-212ENST00000596163 SERPINE3A8MV23 424 aa13.89□□□□□ -0.19
SHKBP1-212ENST00000596163 ZNF816Q0VGE8 651 aaPredicted RBP13.89□□□□□ -0.19
SHKBP1-212ENST00000596163 PLA2G7Q13093 441 aa13.89□□□□□ -0.19
SHKBP1-212ENST00000596163 MORN2Q502X0 79 aa13.89□□□□□ -0.19
SHKBP1-212ENST00000596163 IDNKQ5T6J7 187 aa13.89□□□□□ -0.19
SHKBP1-212ENST00000596163 OR52L2PQ8NGH6 319 aa13.89□□□□□ -0.19
SHKBP1-212ENST00000596163 OR2T6Q8NHC8 308 aa13.89□□□□□ -0.19
SHKBP1-212ENST00000596163 PHF21AQ96BD5 680 aa13.89□□□□□ -0.19
SHKBP1-212ENST00000596163 ETV7Q9Y603 341 aa13.89□□□□□ -0.19
SHKBP1-212ENST00000596163 RAB27BO00194 218 aa13.88□□□□□ -0.19
SHKBP1-212ENST00000596163 HSD17B6O14756 317 aa13.88□□□□□ -0.19
SHKBP1-212ENST00000596163 TXNL1O43396 289 aa13.88□□□□□ -0.19
SHKBP1-212ENST00000596163 CHST1O43916 411 aa13.88□□□□□ -0.19
SHKBP1-212ENST00000596163 CLEC2LP0C7M8 214 aa13.88□□□□□ -0.19
SHKBP1-212ENST00000596163 HIST1H1DP16402 221 aaKnown RBP13.88□□□□□ -0.19
SHKBP1-212ENST00000596163 TALDO1P37837 337 aa13.88□□□□□ -0.19
SHKBP1-212ENST00000596163 CCBE1Q6UXH8 406 aaPredicted RBP13.88□□□□□ -0.19
SHKBP1-212ENST00000596163 TMEM219Q86XT9 240 aa13.88□□□□□ -0.19
SHKBP1-212ENST00000596163 ZNF439Q8NDP4 499 aa13.88□□□□□ -0.19
SHKBP1-212ENST00000596163 IL1F10Q8WWZ1 152 aa13.88□□□□□ -0.19
SHKBP1-212ENST00000596163 PRSS22Q9GZN4 317 aa13.88□□□□□ -0.19
SHKBP1-212ENST00000596163 Q9N2K0 584 aa13.88□□□□□ -0.19
SHKBP1-212ENST00000596163 A0A075B6Q4 140 aa13.87□□□□□ -0.19
SHKBP1-212ENST00000596163 SNRPBP14678 240 aaKnown RBP13.87□□□□□ -0.19
SHKBP1-212ENST00000596163 GNB3P16520 340 aa13.87□□□□□ -0.19
SHKBP1-212ENST00000596163 HLA-DRB3P79483 266 aa13.87□□□□□ -0.19
SHKBP1-212ENST00000596163 ARFRP1Q13795 201 aa13.87□□□□□ -0.19
SHKBP1-212ENST00000596163 MOGAT2Q3SYC2 334 aa13.87□□□□□ -0.19
SHKBP1-212ENST00000596163 CT45A1Q5HYN5 189 aa13.87□□□□□ -0.19
SHKBP1-212ENST00000596163 MOB3BQ86TA1 216 aa13.87□□□□□ -0.19
SHKBP1-212ENST00000596163 DRAM1Q8N682 238 aa13.87□□□□□ -0.19
SHKBP1-212ENST00000596163 OR2AK2Q8NG84 335 aa13.87□□□□□ -0.19
SHKBP1-212ENST00000596163 OR13F1Q8NGS4 319 aa13.87□□□□□ -0.19
SHKBP1-212ENST00000596163 CT45A3Q8NHU0 189 aa13.87□□□□□ -0.19
SHKBP1-212ENST00000596163 CYYR1Q96J86 154 aa13.87□□□□□ -0.19
SHKBP1-212ENST00000596163 HDHD3Q9BSH5 251 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-212ENST00000596163 ABHD14AQ9BUJ0 271 aa13.87□□□□□ -0.19
SHKBP1-212ENST00000596163 MRPS26Q9BYN8 205 aaKnown RBP13.87□□□□□ -0.19
SHKBP1-212ENST00000596163 FBN3Q75N90 2809 aa13.87□□□□□ -0.19
SHKBP1-212ENST00000596163 FAM90A9PA6NNJ1 464 aa13.86□□□□□ -0.19
SHKBP1-212ENST00000596163 TRDCB7Z8K6 153 aa13.86□□□□□ -0.19
SHKBP1-212ENST00000596163 M0QZK8 103 aa13.86□□□□□ -0.19
SHKBP1-212ENST00000596163 MFNGO00587 321 aa13.86□□□□□ -0.19
SHKBP1-212ENST00000596163 TIMM23O14925 209 aa13.86□□□□□ -0.19
SHKBP1-212ENST00000596163 OR2F2O95006 317 aa13.86□□□□□ -0.19
SHKBP1-212ENST00000596163 ZBTB25P24278 435 aa13.86□□□□□ -0.19
SHKBP1-212ENST00000596163 CD24P25063 80 aa13.86□□□□□ -0.19
SHKBP1-212ENST00000596163 PPP1CCP36873 323 aaKnown RBP13.86□□□□□ -0.19
SHKBP1-212ENST00000596163 ZNF134P52741 427 aa13.86□□□□□ -0.19
SHKBP1-212ENST00000596163 ZNF137PP52743 207 aa13.86□□□□□ -0.19
SHKBP1-212ENST00000596163 LSM3P62310 102 aaKnown RBP13.86□□□□□ -0.19
SHKBP1-212ENST00000596163 KIR2DS1Q14954 304 aa13.86□□□□□ -0.19
SHKBP1-212ENST00000596163 CDNFQ49AH0 187 aa13.86□□□□□ -0.19
SHKBP1-212ENST00000596163 FAM53AQ6NSI3 398 aaPredicted RBP13.86□□□□□ -0.19
SHKBP1-212ENST00000596163 TGIF2LXQ8IUE1 241 aa13.86□□□□□ -0.19
SHKBP1-212ENST00000596163 LGALS14Q8TCE9 139 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms