RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 FAM53AQ6NSI3 398 aaPredicted RBP11.62□□□□□ -0.55
LIG1-208ENST00000595758 DYNAPQ8N1N2 210 aa11.62□□□□□ -0.55
LIG1-208ENST00000595758 SAMD12Q8N8I0 201 aa11.62□□□□□ -0.55
LIG1-208ENST00000595758 FAM216AQ8WUB2 273 aa11.62□□□□□ -0.55
LIG1-208ENST00000595758 SSX3Q99909 188 aa11.62□□□□□ -0.55
LIG1-208ENST00000595758 BCL7BQ9BQE9 202 aa11.62□□□□□ -0.55
LIG1-208ENST00000595758 OR2S2Q9NQN1 319 aa11.62□□□□□ -0.55
LIG1-208ENST00000595758 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.62□□□□□ -0.55
LIG1-208ENST00000595758 DIABLOQ9NR28 239 aa11.62□□□□□ -0.55
LIG1-208ENST00000595758 AMMECR1Q9Y4X0 333 aaPredicted RBP11.62□□□□□ -0.55
LIG1-208ENST00000595758 FBN1P35555 2871 aaKnown RBP11.61□□□□□ -0.55
LIG1-208ENST00000595758 TRAV18A0A075B6X5 111 aa11.61□□□□□ -0.55
LIG1-208ENST00000595758 A0A1W2PPE3 182 aa11.61□□□□□ -0.55
LIG1-208ENST00000595758 SPCS2Q15005 226 aa11.61□□□□□ -0.55
LIG1-208ENST00000595758 Q3ZCU0 254 aa11.61□□□□□ -0.55
LIG1-208ENST00000595758 PLA1AQ53H76 456 aa11.61□□□□□ -0.55
LIG1-208ENST00000595758 UBE2NLQ5JXB2 153 aa11.61□□□□□ -0.55
LIG1-208ENST00000595758 HACD4Q5VWC8 232 aa11.61□□□□□ -0.55
LIG1-208ENST00000595758 C16orf87Q6PH81 154 aa11.61□□□□□ -0.55
LIG1-208ENST00000595758 C8orf31Q8N9H6 132 aa11.61□□□□□ -0.55
LIG1-208ENST00000595758 OR52L2PQ8NGH6 319 aa11.61□□□□□ -0.55
LIG1-208ENST00000595758 OR10V1Q8NGI7 309 aa11.61□□□□□ -0.55
LIG1-208ENST00000595758 OR10X1Q8NGY0 326 aa11.61□□□□□ -0.55
LIG1-208ENST00000595758 OR5R1Q8NH85 324 aa11.61□□□□□ -0.55
LIG1-208ENST00000595758 IL1F10Q8WWZ1 152 aa11.61□□□□□ -0.55
LIG1-208ENST00000595758 ACOT12Q8WYK0 555 aa11.61□□□□□ -0.55
LIG1-208ENST00000595758 AP3S1Q92572 193 aa11.61□□□□□ -0.55
LIG1-208ENST00000595758 S100A16Q96FQ6 103 aaKnown RBP11.61□□□□□ -0.55
LIG1-208ENST00000595758 CHIAQ9BZP6 476 aa11.61□□□□□ -0.55
LIG1-208ENST00000595758 ABCG5Q9H222 651 aa11.61□□□□□ -0.55
LIG1-208ENST00000595758 COMMD3Q9UBI1 195 aa11.61□□□□□ -0.55
LIG1-208ENST00000595758 ELF5Q9UKW6 265 aaPredicted RBP11.61□□□□□ -0.55
LIG1-208ENST00000595758 TMEM235A6NFC5 223 aa11.6□□□□□ -0.55
LIG1-208ENST00000595758 VGLL3A8MV65 326 aa11.6□□□□□ -0.55
LIG1-208ENST00000595758 TRDCB7Z8K6 153 aa11.6□□□□□ -0.55
LIG1-208ENST00000595758 LY6LH3BQJ8 138 aa11.6□□□□□ -0.55
LIG1-208ENST00000595758 H3BUX3 64 aa11.6□□□□□ -0.55
LIG1-208ENST00000595758 FCGR3AP08637 254 aa11.6□□□□□ -0.55
LIG1-208ENST00000595758 ZNF182P17025 639 aaPredicted RBP11.6□□□□□ -0.55
LIG1-208ENST00000595758 PPP1CCP36873 323 aaKnown RBP11.6□□□□□ -0.55
LIG1-208ENST00000595758 HLA-DRB3P79483 266 aa11.6□□□□□ -0.55
LIG1-208ENST00000595758 PITPNAQ00169 270 aa11.6□□□□□ -0.55
LIG1-208ENST00000595758 MADCAM1Q13477 382 aa11.6□□□□□ -0.55
LIG1-208ENST00000595758 GNMTQ14749 295 aa11.6□□□□□ -0.55
LIG1-208ENST00000595758 PNLIPRP3Q17RR3 467 aa11.6□□□□□ -0.55
LIG1-208ENST00000595758 ZNF260Q3ZCT1 412 aa11.6□□□□□ -0.55
LIG1-208ENST00000595758 MORN2Q502X0 79 aa11.6□□□□□ -0.55
LIG1-208ENST00000595758 TPTE2P1Q5T6R2 138 aa11.6□□□□□ -0.55
LIG1-208ENST00000595758 STEAP3Q658P3 488 aa11.6□□□□□ -0.55
LIG1-208ENST00000595758 LINC00311Q8N616 119 aa11.6□□□□□ -0.55
LIG1-208ENST00000595758 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.6□□□□□ -0.55
LIG1-208ENST00000595758 MDFIQ99750 246 aa11.6□□□□□ -0.55
LIG1-208ENST00000595758 OCSTAMPQ9BR26 566 aa11.6□□□□□ -0.55
LIG1-208ENST00000595758 C19orf24Q9BVV8 132 aa11.6□□□□□ -0.55
LIG1-208ENST00000595758 ABCB10Q9NRK6 738 aa11.6□□□□□ -0.55
LIG1-208ENST00000595758 JPT1Q9UK76 154 aa11.6□□□□□ -0.55
LIG1-208ENST00000595758 OOSP1A8MZH6 123 aa11.59□□□□□ -0.55
LIG1-208ENST00000595758 XRCC3O43542 346 aa11.59□□□□□ -0.55
LIG1-208ENST00000595758 RGS11O94810 467 aa11.59□□□□□ -0.55
LIG1-208ENST00000595758 SCTP09683 121 aa11.59□□□□□ -0.55
LIG1-208ENST00000595758 DTYMKP23919 212 aa11.59□□□□□ -0.55
LIG1-208ENST00000595758 KIR2DS4P43632 304 aa11.59□□□□□ -0.55
LIG1-208ENST00000595758 RAB13P51153 203 aa11.59□□□□□ -0.55
LIG1-208ENST00000595758 GNG2P59768 71 aa11.59□□□□□ -0.55
LIG1-208ENST00000595758 KIR2DS1Q14954 304 aa11.59□□□□□ -0.55
LIG1-208ENST00000595758 CT45A1Q5HYN5 189 aa11.59□□□□□ -0.55
LIG1-208ENST00000595758 CCDC144NLQ6NUI1 221 aa11.59□□□□□ -0.55
LIG1-208ENST00000595758 MZT2AQ6P582 158 aa11.59□□□□□ -0.55
LIG1-208ENST00000595758 IZUMO1Q8IYV9 350 aa11.59□□□□□ -0.55
LIG1-208ENST00000595758 CT45A3Q8NHU0 189 aa11.59□□□□□ -0.55
LIG1-208ENST00000595758 RPEQ96AT9 228 aa11.59□□□□□ -0.55
LIG1-208ENST00000595758 ISOC1Q96CN7 298 aa11.59□□□□□ -0.55
LIG1-208ENST00000595758 ZNF230Q9UIE0 474 aaPredicted RBP11.59□□□□□ -0.55
LIG1-208ENST00000595758 VPREB3Q9UKI3 123 aa11.59□□□□□ -0.55
LIG1-208ENST00000595758 CEPT1Q9Y6K0 416 aa11.59□□□□□ -0.55
LIG1-208ENST00000595758 FAM181BA6NEQ2 426 aa11.58□□□□□ -0.56
LIG1-208ENST00000595758 SLC31A2O15432 143 aa11.58□□□□□ -0.56
LIG1-208ENST00000595758 FABP7O15540 132 aa11.58□□□□□ -0.56
LIG1-208ENST00000595758 GPR137BO60478 399 aa11.58□□□□□ -0.56
LIG1-208ENST00000595758 YPEL1O60688 119 aa11.58□□□□□ -0.56
LIG1-208ENST00000595758 APOA1P02647 267 aa11.58□□□□□ -0.56
LIG1-208ENST00000595758 IL3RAP26951 378 aa11.58□□□□□ -0.56
LIG1-208ENST00000595758 SOX6P35712 828 aa11.58□□□□□ -0.56
LIG1-208ENST00000595758 DYNLT3P51808 116 aa11.58□□□□□ -0.56
LIG1-208ENST00000595758 ARHGDIBP52566 201 aa11.58□□□□□ -0.56
LIG1-208ENST00000595758 ZNF134P52741 427 aa11.58□□□□□ -0.56
LIG1-208ENST00000595758 LY6EQ16553 131 aa11.58□□□□□ -0.56
LIG1-208ENST00000595758 SRSF7Q16629 238 aaKnown RBP eCLIP11.58□□□□□ -0.56
LIG1-208ENST00000595758 LY6G6FQ5SQ64 297 aa11.58□□□□□ -0.56
LIG1-208ENST00000595758 SLC25A48Q6ZT89 311 aaKnown RBP11.58□□□□□ -0.56
LIG1-208ENST00000595758 DTX3Q8N9I9 347 aa11.58□□□□□ -0.56
LIG1-208ENST00000595758 ZNF439Q8NDP4 499 aa11.58□□□□□ -0.56
LIG1-208ENST00000595758 OR4A4PQ8NGN8 299 aa11.58□□□□□ -0.56
LIG1-208ENST00000595758 PIFOQ8TCI5 191 aa11.58□□□□□ -0.56
LIG1-208ENST00000595758 NUDCD2Q8WVJ2 157 aa11.58□□□□□ -0.56
LIG1-208ENST00000595758 MAFIPQ8WZ33 124 aa11.58□□□□□ -0.56
LIG1-208ENST00000595758 TOMM40LQ969M1 308 aa11.58□□□□□ -0.56
LIG1-208ENST00000595758 CMTM3Q96MX0 182 aa11.58□□□□□ -0.56
LIG1-208ENST00000595758 YPEL2Q96QA6 119 aa11.58□□□□□ -0.56
LIG1-208ENST00000595758 AUNIPQ9H7T9 357 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms