RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 CD34P28906 385 aa10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 GLP1RP43220 463 aa10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 KCNJ3P48549 501 aa10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 DIAPH2-AS1Q14236 149 aa10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 MPV17LQ2QL34 196 aa10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 HLA-DRB5Q30154 266 aa10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 ACSM3Q53FZ2 586 aa10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 AWAT2Q6E213 333 aa10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 OR52W1Q6IF63 320 aa10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 GLIPR1L1Q6UWM5 242 aa10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 THNSL2Q86YJ6 484 aa10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 CDH26Q8IXH8 852 aa10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 MS4A15Q8N5U1 240 aa10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 OR4D6Q8NGJ1 314 aa10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 OR13A1Q8NGR1 328 aa10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 TMED9Q9BVK6 235 aa10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 DPCDQ9BVM2 203 aaPredicted RBP10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 BARHL1Q9BZE3 327 aa10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 NCOR1P1Q9H4R4 102 aa10.68□□□□□ -0.7
SHKBP1-208ENST00000595726 A0A087X0M5 115 aa10.67□□□□□ -0.7
SHKBP1-208ENST00000595726 KBTBD11-OT1A0A1B0GTJ5 212 aa10.67□□□□□ -0.7
SHKBP1-208ENST00000595726 A0A1B0GX30 115 aa10.67□□□□□ -0.7
SHKBP1-208ENST00000595726 IGHV3-7P01780 117 aa10.67□□□□□ -0.7
SHKBP1-208ENST00000595726 IGHV4-30-4P0DP06 118 aa10.67□□□□□ -0.7
SHKBP1-208ENST00000595726 FOXE3Q13461 319 aa10.67□□□□□ -0.7
SHKBP1-208ENST00000595726 GPR176Q14439 515 aa10.67□□□□□ -0.7
SHKBP1-208ENST00000595726 LIPKQ5VXJ0 399 aa10.67□□□□□ -0.7
SHKBP1-208ENST00000595726 CCDC144NLQ6NUI1 221 aa10.67□□□□□ -0.7
SHKBP1-208ENST00000595726 C4orf3Q8WVX3 66 aa10.67□□□□□ -0.7
SHKBP1-208ENST00000595726 DCUN1D4Q92564 292 aa10.67□□□□□ -0.7
SHKBP1-208ENST00000595726 UFD1Q92890 307 aa10.67□□□□□ -0.7
SHKBP1-208ENST00000595726 KIRREL1Q96J84 757 aa10.67□□□□□ -0.7
SHKBP1-208ENST00000595726 CNBD2Q96M20 576 aa10.67□□□□□ -0.7
SHKBP1-208ENST00000595726 OR5B12Q96R08 314 aa10.67□□□□□ -0.7
SHKBP1-208ENST00000595726 ISYNA1Q9NPH2 558 aa10.67□□□□□ -0.7
SHKBP1-208ENST00000595726 PCDHB16Q9NRJ7 776 aa10.67□□□□□ -0.7
SHKBP1-208ENST00000595726 CALYQ9NYX4 217 aa10.67□□□□□ -0.7
SHKBP1-208ENST00000595726 AP4M1O00189 453 aa10.66□□□□□ -0.7
SHKBP1-208ENST00000595726 FGF16O43320 207 aa10.66□□□□□ -0.7
SHKBP1-208ENST00000595726 SAP30O75446 220 aa10.66□□□□□ -0.7
SHKBP1-208ENST00000595726 IL1AP01583 271 aa10.66□□□□□ -0.7
SHKBP1-208ENST00000595726 SSTR5P35346 364 aa10.66□□□□□ -0.7
SHKBP1-208ENST00000595726 GPR12P47775 334 aa10.66□□□□□ -0.7
SHKBP1-208ENST00000595726 ATAD3CQ5T2N8 411 aa10.66□□□□□ -0.7
SHKBP1-208ENST00000595726 PRSS48Q7RTY5 328 aa10.66□□□□□ -0.7
SHKBP1-208ENST00000595726 LRRTM1Q86UE6 522 aa10.66□□□□□ -0.7
SHKBP1-208ENST00000595726 ZNF429Q86V71 674 aa10.66□□□□□ -0.7
SHKBP1-208ENST00000595726 RNF152Q8N8N0 203 aa10.66□□□□□ -0.7
SHKBP1-208ENST00000595726 ZNF565Q8N9K5 539 aa10.66□□□□□ -0.7
SHKBP1-208ENST00000595726 OR1N2Q8NGR9 330 aa10.66□□□□□ -0.7
SHKBP1-208ENST00000595726 MRGPRDQ8TDS7 321 aa10.66□□□□□ -0.7
SHKBP1-208ENST00000595726 TOMM40LQ969M1 308 aa10.66□□□□□ -0.7
SHKBP1-208ENST00000595726 MRPS24Q96EL2 167 aaKnown RBP10.66□□□□□ -0.7
SHKBP1-208ENST00000595726 UQCC2Q9BRT2 126 aa10.66□□□□□ -0.7
SHKBP1-208ENST00000595726 CCDC90BQ9GZT6 254 aa10.66□□□□□ -0.7
SHKBP1-208ENST00000595726 LINC00574Q9H8X3 128 aa10.66□□□□□ -0.7
SHKBP1-208ENST00000595726 RCC2Q9P258 522 aaKnown RBP10.66□□□□□ -0.7
SHKBP1-208ENST00000595726 RAB26Q9ULW5 256 aa10.66□□□□□ -0.7
SHKBP1-208ENST00000595726 HECTD4Q9Y4D8 3996 aa10.66□□□□□ -0.7
SHKBP1-208ENST00000595726 KMT2AQ03164 3969 aa10.66□□□□□ -0.7
SHKBP1-208ENST00000595726 OOSP1A8MZH6 123 aa10.65□□□□□ -0.7
SHKBP1-208ENST00000595726 NPIPB11E5RHQ5 1161 aa10.65□□□□□ -0.7
SHKBP1-208ENST00000595726 IGKV1D-33P01593 117 aa10.65□□□□□ -0.7
SHKBP1-208ENST00000595726 IGKV1-33P01594 117 aa10.65□□□□□ -0.7
SHKBP1-208ENST00000595726 ELANEP08246 267 aa10.65□□□□□ -0.7
SHKBP1-208ENST00000595726 HSMCR30P0CW71 290 aa10.65□□□□□ -0.7
SHKBP1-208ENST00000595726 MGMTP16455 207 aa10.65□□□□□ -0.7
SHKBP1-208ENST00000595726 VHLP40337 213 aa10.65□□□□□ -0.7
SHKBP1-208ENST00000595726 PRRX1P54821 245 aa10.65□□□□□ -0.7
SHKBP1-208ENST00000595726 MLLT11Q13015 90 aaPredicted RBP10.65□□□□□ -0.7
SHKBP1-208ENST00000595726 TPBGQ13641 420 aa10.65□□□□□ -0.7
SHKBP1-208ENST00000595726 RBM48Q5RL73 367 aaKnown RBP10.65□□□□□ -0.7
SHKBP1-208ENST00000595726 Q8N1Y9 231 aa10.65□□□□□ -0.7
SHKBP1-208ENST00000595726 TMEM104Q8NE00 496 aa10.65□□□□□ -0.7
SHKBP1-208ENST00000595726 PHYHIPQ92561 330 aa10.65□□□□□ -0.7
SHKBP1-208ENST00000595726 LEAP2Q969E1 77 aa10.65□□□□□ -0.7
SHKBP1-208ENST00000595726 RPEQ96AT9 228 aa10.65□□□□□ -0.7
SHKBP1-208ENST00000595726 CREB3L1Q96BA8 519 aa10.65□□□□□ -0.7
SHKBP1-208ENST00000595726 Q96M66 194 aa10.65□□□□□ -0.7
SHKBP1-208ENST00000595726 BANF2Q9H503 90 aa10.65□□□□□ -0.7
SHKBP1-208ENST00000595726 GNB4Q9HAV0 340 aa10.65□□□□□ -0.7
SHKBP1-208ENST00000595726 IDI2-AS1Q9NZ38 188 aa10.65□□□□□ -0.7
SHKBP1-208ENST00000595726 TRAV39A0A0B4J263 110 aa10.64□□□□□ -0.71
SHKBP1-208ENST00000595726 A0A1W2PPI3 338 aa10.64□□□□□ -0.71
SHKBP1-208ENST00000595726 TMEM30CPA0ZSE6 113 aa10.64□□□□□ -0.71
SHKBP1-208ENST00000595726 NCBP2LA6PVI3 153 aaKnown RBP10.64□□□□□ -0.71
SHKBP1-208ENST00000595726 CRTAPO75718 401 aaPredicted RBP10.64□□□□□ -0.71
SHKBP1-208ENST00000595726 UCHL1P09936 223 aa10.64□□□□□ -0.71
SHKBP1-208ENST00000595726 NFYBP25208 207 aa10.64□□□□□ -0.71
SHKBP1-208ENST00000595726 MAP2K4P45985 399 aa10.64□□□□□ -0.71
SHKBP1-208ENST00000595726 RPS25P62851 125 aaKnown RBP10.64□□□□□ -0.71
SHKBP1-208ENST00000595726 GNB1P62873 340 aa10.64□□□□□ -0.71
SHKBP1-208ENST00000595726 TBCEQ15813 527 aaPredicted RBP10.64□□□□□ -0.71
SHKBP1-208ENST00000595726 HSD17B12Q53GQ0 312 aa10.64□□□□□ -0.71
SHKBP1-208ENST00000595726 ZNF497Q6ZNH5 498 aa10.64□□□□□ -0.71
SHKBP1-208ENST00000595726 CEACAM19Q7Z692 300 aa10.64□□□□□ -0.71
SHKBP1-208ENST00000595726 NEK7Q8TDX7 302 aa10.64□□□□□ -0.71
SHKBP1-208ENST00000595726 TMEM203Q969S6 136 aa10.64□□□□□ -0.71
SHKBP1-208ENST00000595726 SELENOIQ9C0D9 397 aa10.64□□□□□ -0.71
SHKBP1-208ENST00000595726 KLK15Q9H2R5 256 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms