RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 PPP1CCP36873 323 aaKnown RBP11.09□□□□□ -0.63
SHKBP1-207ENST00000595631 ZNF134P52741 427 aa11.09□□□□□ -0.63
SHKBP1-207ENST00000595631 HLA-DRB3P79483 266 aa11.09□□□□□ -0.63
SHKBP1-207ENST00000595631 AANATQ16613 207 aa11.09□□□□□ -0.63
SHKBP1-207ENST00000595631 CTF1Q16619 201 aa11.09□□□□□ -0.63
SHKBP1-207ENST00000595631 AWAT1Q58HT5 328 aa11.09□□□□□ -0.63
SHKBP1-207ENST00000595631 GPR141Q7Z602 305 aa11.09□□□□□ -0.63
SHKBP1-207ENST00000595631 ANKRD13BQ86YJ7 626 aa11.09□□□□□ -0.63
SHKBP1-207ENST00000595631 IZUMO1Q8IYV9 350 aa11.09□□□□□ -0.63
SHKBP1-207ENST00000595631 OR10X1Q8NGY0 326 aa11.09□□□□□ -0.63
SHKBP1-207ENST00000595631 SPATA3Q8NHX4 192 aa11.09□□□□□ -0.63
SHKBP1-207ENST00000595631 IL1F10Q8WWZ1 152 aa11.09□□□□□ -0.63
SHKBP1-207ENST00000595631 MAFIPQ8WZ33 124 aa11.09□□□□□ -0.63
SHKBP1-207ENST00000595631 TOMM40LQ969M1 308 aa11.09□□□□□ -0.63
SHKBP1-207ENST00000595631 Q9N2K0 584 aa11.09□□□□□ -0.63
SHKBP1-207ENST00000595631 ABCB10Q9NRK6 738 aa11.09□□□□□ -0.63
SHKBP1-207ENST00000595631 RHBDL2Q9NX52 303 aa11.09□□□□□ -0.63
SHKBP1-207ENST00000595631 TCF19Q9Y242 345 aa11.09□□□□□ -0.63
SHKBP1-207ENST00000595631 AMMECR1Q9Y4X0 333 aaPredicted RBP11.09□□□□□ -0.63
SHKBP1-207ENST00000595631 A6NDX4 124 aa11.08□□□□□ -0.64
SHKBP1-207ENST00000595631 GABARAPO95166 117 aa11.08□□□□□ -0.64
SHKBP1-207ENST00000595631 SCTP09683 121 aa11.08□□□□□ -0.64
SHKBP1-207ENST00000595631 CEACAM3P40198 252 aa11.08□□□□□ -0.64
SHKBP1-207ENST00000595631 REG1BP48304 166 aa11.08□□□□□ -0.64
SHKBP1-207ENST00000595631 RAG2P55895 527 aa11.08□□□□□ -0.64
SHKBP1-207ENST00000595631 MADCAM1Q13477 382 aa11.08□□□□□ -0.64
SHKBP1-207ENST00000595631 MORN2Q502X0 79 aa11.08□□□□□ -0.64
SHKBP1-207ENST00000595631 CT45A1Q5HYN5 189 aa11.08□□□□□ -0.64
SHKBP1-207ENST00000595631 DHRS7BQ6IAN0 325 aaPredicted RBP11.08□□□□□ -0.64
SHKBP1-207ENST00000595631 C12orf54Q6X4T0 127 aa11.08□□□□□ -0.64
SHKBP1-207ENST00000595631 MOB1BQ7L9L4 216 aa11.08□□□□□ -0.64
SHKBP1-207ENST00000595631 ZNF554Q86TJ5 538 aa11.08□□□□□ -0.64
SHKBP1-207ENST00000595631 CT45A3Q8NHU0 189 aa11.08□□□□□ -0.64
SHKBP1-207ENST00000595631 RPEQ96AT9 228 aa11.08□□□□□ -0.64
SHKBP1-207ENST00000595631 RBMXL1Q96E39 390 aaKnown RBP11.08□□□□□ -0.64
SHKBP1-207ENST00000595631 PARP12Q9H0J9 701 aaKnown RBP11.08□□□□□ -0.64
SHKBP1-207ENST00000595631 RIMS4Q9H426 269 aaPredicted RBP11.08□□□□□ -0.64
SHKBP1-207ENST00000595631 RAB9BQ9NP90 201 aa11.08□□□□□ -0.64
SHKBP1-207ENST00000595631 ABRACLQ9P1F3 81 aa11.08□□□□□ -0.64
SHKBP1-207ENST00000595631 ZNF230Q9UIE0 474 aaPredicted RBP11.08□□□□□ -0.64
SHKBP1-207ENST00000595631 ETV7Q9Y603 341 aa11.08□□□□□ -0.64
SHKBP1-207ENST00000595631 A0A1W2PPI3 338 aa11.07□□□□□ -0.64
SHKBP1-207ENST00000595631 TMEM235A6NFC5 223 aa11.07□□□□□ -0.64
SHKBP1-207ENST00000595631 FCGR3AP08637 254 aa11.07□□□□□ -0.64
SHKBP1-207ENST00000595631 DYNLT3P51808 116 aa11.07□□□□□ -0.64
SHKBP1-207ENST00000595631 ARFRP1Q13795 201 aa11.07□□□□□ -0.64
SHKBP1-207ENST00000595631 TMEM30BQ3MIR4 351 aa11.07□□□□□ -0.64
SHKBP1-207ENST00000595631 CDNFQ49AH0 187 aa11.07□□□□□ -0.64
SHKBP1-207ENST00000595631 Q6ZSV7 163 aa11.07□□□□□ -0.64
SHKBP1-207ENST00000595631 SLC25A48Q6ZT89 311 aaKnown RBP11.07□□□□□ -0.64
SHKBP1-207ENST00000595631 LINC00311Q8N616 119 aa11.07□□□□□ -0.64
SHKBP1-207ENST00000595631 DTX3Q8N9I9 347 aa11.07□□□□□ -0.64
SHKBP1-207ENST00000595631 SLC25A46Q96AG3 418 aa11.07□□□□□ -0.64
SHKBP1-207ENST00000595631 CREB3L1Q96BA8 519 aa11.07□□□□□ -0.64
SHKBP1-207ENST00000595631 GALMQ96C23 342 aa11.07□□□□□ -0.64
SHKBP1-207ENST00000595631 OR1A1Q9P1Q5 309 aa11.07□□□□□ -0.64
SHKBP1-207ENST00000595631 JPT1Q9UK76 154 aa11.07□□□□□ -0.64
SHKBP1-207ENST00000595631 IGKV1D-8A0A087WSZ0 117 aa11.06□□□□□ -0.64
SHKBP1-207ENST00000595631 IGKV1-6A0A0C4DH72 117 aa11.06□□□□□ -0.64
SHKBP1-207ENST00000595631 HSD17B6O14756 317 aa11.06□□□□□ -0.64
SHKBP1-207ENST00000595631 TIMM23O14925 209 aa11.06□□□□□ -0.64
SHKBP1-207ENST00000595631 COMPP49747 757 aaPredicted RBP11.06□□□□□ -0.64
SHKBP1-207ENST00000595631 SCAND1P57086 179 aa11.06□□□□□ -0.64
SHKBP1-207ENST00000595631 MRPS15P82914 257 aaKnown RBP11.06□□□□□ -0.64
SHKBP1-207ENST00000595631 HTD2P86397 168 aa11.06□□□□□ -0.64
SHKBP1-207ENST00000595631 FOXL1Q12952 345 aa11.06□□□□□ -0.64
SHKBP1-207ENST00000595631 HERPUD1Q15011 391 aa11.06□□□□□ -0.64
SHKBP1-207ENST00000595631 DRAM1Q8N682 238 aa11.06□□□□□ -0.64
SHKBP1-207ENST00000595631 C8orf31Q8N9H6 132 aa11.06□□□□□ -0.64
SHKBP1-207ENST00000595631 OR56B4Q8NH76 319 aa11.06□□□□□ -0.64
SHKBP1-207ENST00000595631 NUDCD2Q8WVJ2 157 aa11.06□□□□□ -0.64
SHKBP1-207ENST00000595631 ST6GALNAC6Q969X2 333 aa11.06□□□□□ -0.64
SHKBP1-207ENST00000595631 OCSTAMPQ9BR26 566 aa11.06□□□□□ -0.64
SHKBP1-207ENST00000595631 SPATA2Q9UM82 520 aa11.06□□□□□ -0.64
SHKBP1-207ENST00000595631 STAB1Q9NY15 2570 aa11.06□□□□□ -0.64
SHKBP1-207ENST00000595631 TRAV18A0A075B6X5 111 aa11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 IGHV3-72A0A0B4J1Y9 119 aa11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 SERPINE3A8MV23 424 aa11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 OOSP1A8MZH6 123 aa11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 TRDCB7Z8K6 153 aa11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 ST8SIA5O15466 376 aa11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 SSX5O60225 188 aa11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 YPEL1O60688 119 aa11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 NDUFA7O95182 113 aa11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 GSTT2P0CG29 244 aa11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 GSTT2BP0CG30 244 aa11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 PTHLHP12272 177 aa11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 RPL15P61313 204 aaKnown RBP11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 ZNF260Q3ZCT1 412 aa11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 Q3ZCU0 254 aa11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 CLVS1Q8IUQ0 354 aaPredicted RBP11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 CROCCP3Q8IVE0 287 aa11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 ODF3L1Q8IXM7 274 aa11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 LYG1Q8N1E2 194 aa11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 SAMD12Q8N8I0 201 aa11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 OR4F5Q8NH21 305 aa11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 CAPSLQ8WWF8 208 aa11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 CFHR4Q92496 578 aa11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 YPEL2Q96QA6 119 aa11.05□□□□□ -0.64
SHKBP1-207ENST00000595631 ABHD14AQ9BUJ0 271 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms