RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 MADCAM1Q13477 382 aa20.81■□□□□ 0.92
TRIM28-204ENST00000594806 TPTE2P1Q5T6R2 138 aa20.81■□□□□ 0.92
TRIM28-204ENST00000594806 PHF21AQ96BD5 680 aa20.81■□□□□ 0.92
TRIM28-204ENST00000594806 KCTD12Q96CX2 325 aaKnown RBP20.81■□□□□ 0.92
TRIM28-204ENST00000594806 CYYR1Q96J86 154 aa20.81■□□□□ 0.92
TRIM28-204ENST00000594806 OCSTAMPQ9BR26 566 aa20.81■□□□□ 0.92
TRIM28-204ENST00000594806 RAB18Q9NP72 206 aa20.81■□□□□ 0.92
TRIM28-204ENST00000594806 FAM181BA6NEQ2 426 aa20.8■□□□□ 0.92
TRIM28-204ENST00000594806 GPR137BO60478 399 aa20.8■□□□□ 0.92
TRIM28-204ENST00000594806 RGS11O94810 467 aa20.8■□□□□ 0.92
TRIM28-204ENST00000594806 BRS3P32247 399 aa20.8■□□□□ 0.92
TRIM28-204ENST00000594806 RPL5P46777 297 aaKnown RBP20.8■□□□□ 0.92
TRIM28-204ENST00000594806 COMPP49747 757 aaPredicted RBP20.8■□□□□ 0.92
TRIM28-204ENST00000594806 GNG10P50151 68 aa20.8■□□□□ 0.92
TRIM28-204ENST00000594806 FOXL1Q12952 345 aa20.8■□□□□ 0.92
TRIM28-204ENST00000594806 UTF1Q5T230 341 aa20.8■□□□□ 0.92
TRIM28-204ENST00000594806 OR10X1Q8NGY0 326 aa20.8■□□□□ 0.92
TRIM28-204ENST00000594806 UBALD1Q8TB05 177 aa20.8■□□□□ 0.92
TRIM28-204ENST00000594806 SETD6Q8TBK2 473 aa20.8■□□□□ 0.92
TRIM28-204ENST00000594806 LEAP2Q969E1 77 aa20.8■□□□□ 0.92
TRIM28-204ENST00000594806 Q9N2K0 584 aa20.8■□□□□ 0.92
TRIM28-204ENST00000594806 PITPNC1Q9UKF7 332 aa20.8■□□□□ 0.92
TRIM28-204ENST00000594806 GNB3P16520 340 aa20.79■□□□□ 0.92
TRIM28-204ENST00000594806 IL3RAP26951 378 aa20.79■□□□□ 0.92
TRIM28-204ENST00000594806 CTF1Q16619 201 aa20.79■□□□□ 0.92
TRIM28-204ENST00000594806 GPR107Q5VW38 600 aa20.79■□□□□ 0.92
TRIM28-204ENST00000594806 RPEQ96AT9 228 aa20.79■□□□□ 0.92
TRIM28-204ENST00000594806 HDHD3Q9BSH5 251 aaPredicted RBP20.79■□□□□ 0.92
TRIM28-204ENST00000594806 IGHV3-43A0A0B4J1X8 118 aa20.78■□□□□ 0.92
TRIM28-204ENST00000594806 YPEL1O60688 119 aa20.78■□□□□ 0.92
TRIM28-204ENST00000594806 IGHV3-7P01780 117 aa20.78■□□□□ 0.92
TRIM28-204ENST00000594806 GSTP1P09211 210 aaKnown RBP20.78■□□□□ 0.92
TRIM28-204ENST00000594806 IGHV3-43DP0DP04 118 aa20.78■□□□□ 0.92
TRIM28-204ENST00000594806 MNDAP41218 407 aa20.78■□□□□ 0.92
TRIM28-204ENST00000594806 SRSF7Q16629 238 aaKnown RBP eCLIP20.78■□□□□ 0.92
TRIM28-204ENST00000594806 MORN2Q502X0 79 aa20.78■□□□□ 0.92
TRIM28-204ENST00000594806 OR5H6Q8NGV6 325 aa20.78■□□□□ 0.92
TRIM28-204ENST00000594806 PIFOQ8TCI5 191 aa20.78■□□□□ 0.92
TRIM28-204ENST00000594806 YPEL2Q96QA6 119 aa20.78■□□□□ 0.92
TRIM28-204ENST00000594806 RAB7AP51149 207 aa20.77■□□□□ 0.92
TRIM28-204ENST00000594806 HLA-DRB3P79483 266 aa20.77■□□□□ 0.92
TRIM28-204ENST00000594806 PITPNAQ00169 270 aa20.77■□□□□ 0.92
TRIM28-204ENST00000594806 ARFRP1Q13795 201 aa20.77■□□□□ 0.92
TRIM28-204ENST00000594806 CDNFQ49AH0 187 aa20.77■□□□□ 0.92
TRIM28-204ENST00000594806 OLFML2AQ68BL7 652 aa20.77■□□□□ 0.92
TRIM28-204ENST00000594806 Q6ZPA2 131 aa20.77■□□□□ 0.92
TRIM28-204ENST00000594806 SLC25A48Q6ZT89 311 aaKnown RBP20.77■□□□□ 0.92
TRIM28-204ENST00000594806 ZNF439Q8NDP4 499 aa20.77■□□□□ 0.92
TRIM28-204ENST00000594806 TOMM40LQ969M1 308 aa20.77■□□□□ 0.92
TRIM28-204ENST00000594806 BCL7BQ9BQE9 202 aa20.77■□□□□ 0.92
TRIM28-204ENST00000594806 DIABLOQ9NR28 239 aa20.77■□□□□ 0.92
TRIM28-204ENST00000594806 SCOCQ9UIL1 159 aa20.77■□□□□ 0.92
TRIM28-204ENST00000594806 TCF19Q9Y242 345 aa20.77■□□□□ 0.92
TRIM28-204ENST00000594806 A0A075B6Q4 140 aa20.76■□□□□ 0.91
TRIM28-204ENST00000594806 NDUFA7O95182 113 aa20.76■□□□□ 0.91
TRIM28-204ENST00000594806 PAX6P26367 422 aa20.76■□□□□ 0.91
TRIM28-204ENST00000594806 TALDO1P37837 337 aa20.76■□□□□ 0.91
TRIM28-204ENST00000594806 KIR2DS4P43632 304 aa20.76■□□□□ 0.91
TRIM28-204ENST00000594806 RORCP51449 518 aa20.76■□□□□ 0.91
TRIM28-204ENST00000594806 KIR2DS1Q14954 304 aa20.76■□□□□ 0.91
TRIM28-204ENST00000594806 PNLIPRP3Q17RR3 467 aa20.76■□□□□ 0.91
TRIM28-204ENST00000594806 PLA1AQ53H76 456 aa20.76■□□□□ 0.91
TRIM28-204ENST00000594806 HACD4Q5VWC8 232 aa20.76■□□□□ 0.91
TRIM28-204ENST00000594806 DHRS7BQ6IAN0 325 aaPredicted RBP20.76■□□□□ 0.91
TRIM28-204ENST00000594806 OR8H3Q8N146 312 aa20.76■□□□□ 0.91
TRIM28-204ENST00000594806 DTX3Q8N9I9 347 aa20.76■□□□□ 0.91
TRIM28-204ENST00000594806 SLC25A38Q96DW6 304 aa20.76■□□□□ 0.91
TRIM28-204ENST00000594806 NAA50Q9GZZ1 169 aaKnown RBP20.76■□□□□ 0.91
TRIM28-204ENST00000594806 ABCG5Q9H222 651 aa20.76■□□□□ 0.91
TRIM28-204ENST00000594806 A0A1B0GUS0 222 aa20.75■□□□□ 0.91
TRIM28-204ENST00000594806 TRDCB7Z8K6 153 aa20.75■□□□□ 0.91
TRIM28-204ENST00000594806 LPLP06858 475 aa20.75■□□□□ 0.91
TRIM28-204ENST00000594806 OR52L2PQ8NGH6 319 aa20.75■□□□□ 0.91
TRIM28-204ENST00000594806 OR10V1Q8NGI7 309 aa20.75■□□□□ 0.91
TRIM28-204ENST00000594806 IL1F10Q8WWZ1 152 aa20.75■□□□□ 0.91
TRIM28-204ENST00000594806 ACOT12Q8WYK0 555 aa20.75■□□□□ 0.91
TRIM28-204ENST00000594806 CMTM3Q96MX0 182 aa20.75■□□□□ 0.91
TRIM28-204ENST00000594806 C1RLQ9NZP8 487 aa20.75■□□□□ 0.91
TRIM28-204ENST00000594806 A0A1W2PPE3 182 aa20.74■□□□□ 0.91
TRIM28-204ENST00000594806 DIRAS3O95661 229 aa20.74■□□□□ 0.91
TRIM28-204ENST00000594806 GAPDHP04406 335 aaKnown RBP20.74■□□□□ 0.91
TRIM28-204ENST00000594806 FCGR3AP08637 254 aa20.74■□□□□ 0.91
TRIM28-204ENST00000594806 DTYMKP23919 212 aa20.74■□□□□ 0.91
TRIM28-204ENST00000594806 ZBTB25P24278 435 aa20.74■□□□□ 0.91
TRIM28-204ENST00000594806 ZNF137PP52743 207 aa20.74■□□□□ 0.91
TRIM28-204ENST00000594806 ZNF816Q0VGE8 651 aaPredicted RBP20.74■□□□□ 0.91
TRIM28-204ENST00000594806 LY6EQ16553 131 aa20.74■□□□□ 0.91
TRIM28-204ENST00000594806 ZNF260Q3ZCT1 412 aa20.74■□□□□ 0.91
TRIM28-204ENST00000594806 CT45A1Q5HYN5 189 aa20.74■□□□□ 0.91
TRIM28-204ENST00000594806 UBE2NLQ5JXB2 153 aa20.74■□□□□ 0.91
TRIM28-204ENST00000594806 Q6ZS49 121 aa20.74■□□□□ 0.91
TRIM28-204ENST00000594806 OR4F5Q8NH21 305 aa20.74■□□□□ 0.91
TRIM28-204ENST00000594806 CT45A3Q8NHU0 189 aa20.74■□□□□ 0.91
TRIM28-204ENST00000594806 RAB2BQ8WUD1 216 aa20.74■□□□□ 0.91
TRIM28-204ENST00000594806 S100A16Q96FQ6 103 aaKnown RBP20.74■□□□□ 0.91
TRIM28-204ENST00000594806 DCSTAMPQ9H295 470 aa20.74■□□□□ 0.91
TRIM28-204ENST00000594806 A6NDX4 124 aa20.73■□□□□ 0.91
TRIM28-204ENST00000594806 ITGB1BP1O14713 200 aa20.73■□□□□ 0.91
TRIM28-204ENST00000594806 RAB13P51153 203 aa20.73■□□□□ 0.91
TRIM28-204ENST00000594806 ZNF134P52741 427 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms